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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_030996714.1 PREDICTED: Strongylocentrotus purpuratus polypyrimidine tract-binding protein 1 (LOC574897), transcript variant X3, mRNA CTTTTCTCATCTTCCCTTGTCTCTGCAGGTAAAGAGGGAAAACAGTGCGTCATCGCCTTCACGCGTGGTC CACATACGTAATCTCGCCAACGAGGCTTTAGACGCTGACGTCCTAAGCCTTGCCTTACCTATCGGTCGTG TCACCAAGTATCTCATGCTCAAAGGCAAAAACCAGGCATTCCTCGAAATGGCAGATGAAGCGACAGCACA GACGTTTATCAACCATTACACGCACATGCCCAGGAACGTCCATGGACGACAGATCTACTGTCAGTTCTCG AAGCACAAGGAACTCAAAACCGACTTTGCCCACACGCAACAGGCCCTGGCTGTGCAAGCTGCCCTGGCTG CTGTGCATGCAGTCCTCAACACCTCCTCCGCCTCCTCCTCCTCCCCCTCCTCCTCCTCCGGCCCCTCTTA CTCCATGTCTGGTAGCGGGGACCACCCCATGACCTCTTCATCTTCTGGCGGCGGCGGCGGCTTCGGAGAT CATCTCCGCGACTCTCCTCCTCCGACGTCCTCCTCTGGATCTTCTAACCTGGATGCAAATACCATCTCTC AAATCGCCTCGCAGGTGGCCCTCCAGGCGGCGCAGCAGCACCCCATGCTTCAGCCGCATCCCATGCTACA GCAGCACCCGCAGCACGCCACACACCCCAAGGTACCGGACACCGGCGGTGGAGTCAACACCATCCTCCGA GTCATCGTGGAGAATGTGACCTACCAGATCACCGTCGACACCCTCCATGAGATCTTCAGGAAGTATGGCA CCGTGCTCAGGATCGTCACATTCATCAAGAGCGGTCAGTTCCAGGCCCTTGTACAGTTCTCTGATGCATC ACAAGCTGCTGTAGCTAAATTGGAGTTAGATGGAAAGAACATCTACAACAACTGCTGCCAGCTTCGCATC GACTTCTCCAAACTGACCAACCTCAGCGTCAAGTACAACAACGAGAAGAGCCGCGACTACACATGTGACC TACCGCAAGGTGACGGACTCACAGGGGTCGATCCTAGCACTGCTGCCATGTTAGGATTTGGTGGGGCAGC TGGCCTTATATCGCCTTACGCCACAGGGCACGGTCTGCCTTTCGCCGGCACGACGCCGGTCTCACTAGCA GGATATCATCAAGCAGGTGTGCCTGGTTTCCCTGCCGGTCTATCTGCCTTACCCCACCACGCTGCTGCAG CGGCCCAGGGCATGAGAATGCCAGGCATGTACATGCCGTCGGGCTCCTCGGTCATCCTCGTTAGCAATCT CACCCCAGAGCTGGTCACACCTCAGGCTCTCTTTACCCTCTTTGGCGTCTACGGTGATGTGCAACGAGTC AAGATTCTCTACGAGAAGCGGGATAACGCCCTGATACAGATGAGCGATCCCAACCAGTCACAACTAGCCA TGAAGCATCTGTCCGGTGTGAAGCTGTATGGAAAGCAGATCCGTGTTACGGCATCCAAGCATCAAATGGT TCAGCTCCCCAAGGAAGGACAACCGGACGCTGGTCTAACCAAGGACTTCAGTACGTCGCCCCTTCACCGA TTCAAGAAGCCAGGCTCCAAGAATTTCCTTAACATCTACCCACCTAGTTCTACACTGCATCTCTCAAACA TTCCGCCCACTGTCGATGAGGAGACATTAAAAGAGGCATTCTCTCAACATGGTACTGTAGCTAACTTCAA GTTTTTCCCAAAAGACAGGAAGATGGCACTCCTGCAGATGGGCTCTGTAGAAGAAGCAATCCATGCTCTA ATTGCAATGCACAACTACCAGCTGGCTGAGTCGAATCATCTCCGCGTGTCGTTCTCGAAAGCACAGATCT AGACGCGAGGCAGTCCCGCGAAAGTCAATGCATACATGGACCAGTACAACCAAGCAATGTCACAACGAGA TCGACATGTCTAAGCAGAAGTAGGAAGGGGAGACCGCAAAAACGAACTGAGAAAGATTAAAAAGTGTATC TGAATCACCCTTTGTGCCATTTGAATATGGGATCATGCAATGCAAAAACCATTTGATGATAACAATAATG ATACAGAGAAAATAAGTAGGAAATACACTGAGCGGAGACCGGAAGGGCTCTCTAATAAAAACTCTGATTT ACCATGTGTGAGACTTGGCAATATTGGACGGATTTGATTTAATGGTGTTTTAAAGATAGAAATAAGGAAA GAAATGTGGATTATTGACGAGAAAATACCAGGATGCTTTTGTAAGCATTGTTTACAATATCCTGTTTTCT GGACAGGGTTTTATATGGTAGCTTACACGGGATAAATCTTTCCCCTTCCCTTTCATTTTTTTTTCTTTTT CTTTGTTCCTCCCACTCCCTCCCCCTCCCTCAGTCACTTTTGGACTCTCTCTGATATGCTTACTCATTTA GACTTCTGCAAGTTTTCTATGAAATACTTGTGTGTGCGAGTAATTTATACCAAAGCATAAGTGAAAGTGC TTATGGTGAATCTGGACAATTGTCTATTTCTTTTATCCCCATTTATCCCGAGAAAGCTTAAGAAATTGAT GTGTATGATGTAAATAGATCTAAGAAAAAAATTGATAACAGAGATGAGAGAGAGAGATATATTGCATTTG TAATTATTATACAACTGCAATGTGTTATTTTGAATGAATTTTTGAAAACATTTTGATTGCATGTCTTTTT TTTTCTGTGAAAATTTTTTGGTGTCAGACAAATTTTACTCTTAGCTGTATTGTGGTGTGGTGTAAATTTC ATTGATTTTTCTTGCATATTTTCCTCTCTCTCTCACTCTGTTTTTGTCAGTAGTTTAGAATTATTTCTGC AAGGAAAAAAAAATGTCACAAATTGTTTTTGAGATATCCTCTTTGGGGAATAATTGATGTCGTCAATAAA TCATGTATCATTTTGTTGAAGATTATTCAACCTCGTATAATCACCTTGGTTAAGCTCAGAAACTTTTATT GTGTTGGTTTTACATTTCTTTTCTGACATGCTCCAAGAGCAAAGTTTTTCTTCTCTGCGCGACGCAAAAA GGACGTCTAGATCCGACGCTCAGGGTCGTTATAACGTAACAAGTTTGTTGTCTTTACGTATAATCTTTGT AGATATTTGCCTTTGTTAATTTTGGTCTTTGCTGTGAGATAATTTGCTAGAATAATTCTGAAACTAATTT CTTTGAAAAGAGTCACAATTTCACGTTGCTTGGCGGCTTCTATCTTCCGAGAGCATATAGAGTTTTGCCT TTTTCTTTTGTGAGTCACTGACAAAGAATGAACATTCCACATGTGTTGCACTTTACTCTGTTATTTTTAA TTAATTACTGTGGCCAGATTGTTGAGGTGAGGCCTGCTTATATAATAGTACAGCTGGAACTTGAAGCAAT ACATCTCGCGGTCGAGATATGATCTTTACACATTCTTAATTCTCTGTATCTAGCATTCTTACATTTACAA ATGTTAACAATCTCTGTACTCATGATGCTCTAATGCTGTGTTCATATTAAAGCAGTACATCTTTGTTCTC GCATGATATTGACAGAGCTCTGTCTCACAAATTGTTTGTTCCAGCGAACATGTCTGAACGTAAAAGAGAC AATCACTCGCAGTAAAAGGAGGTTTAACAGAACGTAATTTATAACGTTTACTTTCTTGGTCTGTGTTTTA AGGATATGTGCAAACTTTGAAAAATGAGGCTTTGTTCTAGTCACTGCTGTTTAAAGTGGTATTTTGATAA TTTCATGATGATCAGGCAGTTTGATATGTGAATTGATATGTATTTGTAGCAACAAATGATATTCTGTACA TCGTATCTAATTTTCATTCTTATCCAACGTACGCTAAGCTATGTATCGTCTTTTTAAGCAAATAATGACT ACTTGTGTATATTCAGAGACAAAAAATTCTTGTACATGTCACCTTTTTTTTAGGTTAGCCCATTTTCCAT TTGGATCTGCTGTGGTGTATTGTGTAAAGAGATAAGCTAAAAGAAGCTTTGCTTAATTATTTTGTTTCAA TTCTGTATTTCTCTCCAAAATTGAGAAAAATGTGTCACTCTCTTTATTATTTTTTAAATCTGTGCACTCT GCGTGAAACAATTTCTTTCTCAAGCCTTTAGTCAAGGCTGAGTGGGGGAAACTCTGCTCCTCTTTATTTC TTAAAACCTCTATGGAGTTTGGAAGCTGGGCGGCCGATTTTTAATGTGCCTTATAATCAGGGTGACATAC CAGTACCATAAAAGGTGTTTCTTTAAAAGCCAGAGATGCATTGAAAAAGTAAGAAGACAGATTAAAAGGG AGGTTTGCTTTCAGGCAGTGTGTTGAACTTTGGAGAGCATTTTACCTTGTCTCTTTTCCAATCATACTCA TCTTGCTCTTGGTGGAGCAGAGCGTATTAAAGCAGAAAGTTTTATGTCCCGGATATATTTTTGTTTGTCA TCTACCTAGAAATGTATGCTGCTCTCATCATTGCGTATCATGTAAGAAGGATGTACTTTACTCTTGTAAA TGATTGAAGTACATTTCTTTCAGAATGTGGTAGAGAGCATGCCAAGAATCCAGAGGGAAATGCTGAAAAA CCCTTTTTTTCTTCTGATTTATCAATCTTGTATATGTAGTGTATAGGCAAGTTTCACTCTATTATTCCAT GTATTTTAATCTCTGTGGTATTCATAAATGTGGCTTTGTAAAAATTTGACACAAGATAATAATATTGTAG CTTTCAAGTTATCTTAGATATTTAGAACATACTTGGCTAGGTAAGAAGTTTACTACAGCTAAGAAGTGGT TTCTAGGGTATGTAATGCTGTTTTTCTCTTTTAATCTTCTCTGTTTTCTTGTAAAGGCTATGAGAGTTGT TTCTTCCTCTTATTTCATTCAAATTTCCTTAACTTTGCCCGTTTTTTCTCCTTGTTCATGGCAGTGCCTG TCGACTGCACACAGCAAAGTGAGCAGCATCGTTGGCGTGTTTTCTGTGCACATTTCTCAGGCTTTGCTTT ACCATGAATAAGGATAACACTTTAACTCATCAATTCTACGTCTAGCTGCATGAGGTATTTTTTTTAATAT CCTTTTGTTCTGTAACAACCGTTTTTCCCCATTCTGCAGAGTGTTCCAACAAACTATTAACATGCACTCT AGTTTTTCTCCTTCCTTACGTTTCCTACATGTATATAAATCTTTCCCTTATTCACATTTTTGTTTGGTAG CGATTTCACCTGTTTTTCTTCATAAACATTTGATTTGAAATCCCTAACTGTTTCACATTGATACTTTGTT GTTCAAGTCACTCATCTATATCTCTATGCTCTTTCTCTCTCTACACAGCCGATTGAGCGCACACAGCGTT TCAAGGCCTATTGCTACGCTATTCTCGCTTCACAATGCTGCAGTTATATAGGCTTTCTTCACTTCATTAT GTTGCTATTACACTCTCAGTTTAACAACAATCGATCACCTCAAAGTCTTAACTCTACACGCTTTTTGCAC TGGAACTTGTTACAATGAGCTCTTGGTGCAAGGGGCATGATTTTGCCCTGAGGCTGTCAAAGGGTTAAGA TTTTGGGATGGTCTTTCCAGAATGTTTTATTCTTGAAGATTGTTTGTACAAAGAAAGTGTTGACAGGACT TCCAATGCTAGAATAATGTAAGAAACATCATTTAGGGGCACAAGGGACTGGAAAAAGCAAATCTTTTATC GTGAAAAACTGGACTAAAAATCATGTGTTCACAGTAGAACAAGAAGGTTTTGGACCATTTTGGAATTTTA GACACTTGTGACTGATAAGTCAAAAATGCAATTCTGTCTGGATATAATACTTTATCCTGTCAATGGTACA AGTACCCAAGGGGTTACACTCTTTCTCAATTTACCCTATCTCTTGCATCAAATAGCCTTTCCATCTGAGC TTATATGCCTCTATATTTGACTAATATTTGGTTCTAGCATTGTTCTGCCAGCACTTTCCTGACTATGTTA AGATATGTTTTGTTGCTTATCATCCACCTTCCACGGCCATAGTCACTCTCATAGCCACACCTGTATCCCG CCATTTTTTATTGAGTTATTTTTCTTCTCTCTCCTCCAAGAATTTATCCTTTGTTGATTTTTTTTTCTCT CTTTTCTCCTATTTCTGCTAATAAACTCTCAAGACTGTGCGAAAAATCTTCTCTCGTGTTCTCTTTCTTC TCTTCGACTCTTACTACCACTACTTTTACTACTACAATCACGTATTCTCTGACGACACAAAAAACAAAAA ATTCAAAACTATGTATTCCTCTTCCGGTCTGTATTCTATACTCTTCTCCTTGCAACATATGTTTGTGTAT TATCTCAAGCGTGAGGCTGTGAATTTTTAACGTGTTATCCTTCTATAGTCAGGATTTTTATTTTATTTTC CTTCGAAATTAACATTTTGTTGCTACTTGCTAGATGATTTTTTCATGAAATAACCAAGTGCATCTTCTTT TTTTAAATTAGTAGTTGTGATAGGTTTAGCATGTCTCATTATTCTGTTAGAGACGTTAATTTTGTGTGGT GTACCTAGATCTAAAAAGAAAAGAATTTGTTTGTACGTGATTAATTTATTGATATTATATATATACTCCA ATCCCAGCCCGACATCGTCTTTCATAATACGCTGGCCTCCGACCTTTGACCTTGCACCGGAGGTCGGTCA CGAGCACACATGATGGGTCATTTACAACTTGAAGACATTCCTTTGATAATAAATCTGTGAATTCCTCTTC TTTTTTTAAAACCAAAGTTGTTTTTTATCACAGGAAATATAGAAAAGACTTTTTTATATACAAAATTTGC ACCCCTTTATATGGATGATTTGAGCTGTTAGCTAGCAATGCTACACATTTTTTAACAATGGATTTGGACA TTTTATTTTTTCATGAAGCAATCATTGTACAGACATTATTATGGAAACATTTTTTCTCCTTTTTTTTAGG GTATTTAATACCAGGCCTTAATACACCTTCATTTCCCCCCACAAACTTAGTGAACAGTGTAATATTCTGA AACTGAAAAATAAGATGAAATACCTTGAGATAATACCTTGGGATTAAGTTGAGCTTAATCTCGTGGGATC AAACATATCTTGAATGATGGCCCTCGACTGATCGATCCATCGATTACGACGGAGAGGCCCGATGATGACT CGACTATGACCTCGTAGTTGCCTGAAATATCCAGGGATTTTTCAAGTGTGTTGTAAAAAAAAAATATGAA AGAAGTGAGAAAAGCTTAAAAAAAGATTGAAGAGATTGGATATATTAACGTGTGATTTTCATGGTAAATT AAAAATACTTGTTTTATACAAGAGGCTGATGGAATAGAGA
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???blast.eval???
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???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
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???blast.wordsize.5???
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???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
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BLAST time is limited to 30 seconds