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Echinobase Accession
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Echinobase Accession
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Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
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blastn - DNA query to DNA database
blastp - Protein query to protein database
blastx - Translated (6 frames) DNA query to protein database
tblastx - Translated (6 frames) DNA query to translated (6 frames) DNA database
tblastn - Protein query to DNA (6 frames) DNA database
Database
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 3.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
FASTA query sequence
>JT102535.1 TSA: Strongylocentrotus purpuratus WHL22.469712.0 mRNA sequence CATGATCCTAAATGAATGAAGCCAAAGAAGGAAACAATGTCTCTCTGTCCTAAGTAGACGTCTTATATCA GTCTACTCAGGTAGAGTCCAGACTGCCCATATTGCAGCCAAGGAGGTCTCTCCTACCTGGACCCAAGACA CACTACCCACTCCGTAACACCGACATCAAACCACCGCACCTCGTACCATCCACTCCTAACGTACCATTCC GCCATCTGGCAGTTGGACAGCGTGTTGAGACCACAGACGGACGGGTAGGTCTCCTGCACTTCAAGGGCAA GACACACTTTGCCCAGGGATGCATGTGTGGCATCGAGCTTGACGATCCCATCGGCAAACACAACGGTTCC GTTGACGGGATTCATTACTTTGAATGTCCTCAAAGATACGGGGTGTTTGTTCCAGCACACAAGGTCCACA ATCTACCTCCCCCTTCGCCTTCAAGCCCAACATCAACTCTTTCACACAATTCCAGTACTAGTATATGCAG TAGAGATAGCAAAGACTCTAAACCAAGCAGTAGAATACCCACGTTAGGTTTAGCTGGTGGAAAACTCCCA AGACCAAAGACATTACCTGTGTGCAAAGACTCCATTTCCAAGCTGAAGTCGAACAAGAAAAGCGGTAAGA ACATTGATTGCGGAAGGAGCGATACTTCTTCAGAGAAGTCCTCAACATCCAGCAAGCTGTTTCAATCCAA GAAAATTAGTCCTGTACATACCAGTATTACCCATTCTGGGTGGACAGGTGAAAATAGAACTAAAGGCAAG AGGACTACAGATACTCAGGTTAACAAACTAAAACCAAATCATAATACTACTTTCACTGTGAGTGACAATA AACGACAGTATGCGAGGGTGACATCACCGAAGGACAAAGCTTGTAGGAGTAGTAGTACCGAAACTAGTAG CAAGACTCTTCTTCAACGGAAACTTGCGCGCAATAAAAATGTGAATAGTAAACTCAACTCCCGCCCAAGT CTGAATGACTTAACAAGGACGTTTGAAGAAGGAGAAACAGATGAAAATAGACAAGACAAGCCAGACCTTG TTGAAGGTTGTTACTCTAAATTGAACGAGACCTTTGAGTTGGACAAGGAGGTTTCATCATTTTTCCAGGA ATCTTGTTCAGGAAGCCTTGGCTGGGACGACTCGCATTCGCTCAGTCCGCTTGAAGATAGTTCCTCTGGT CGCGAAAAATCAGATTCTAGTTTAGCGTGGGATTTTGAAGTTCCTCAATCATCAACTCCAGTGCAAATCC ATCTCCAAGTAGGTTCAGATATCAGAACTTCTATACCAGAAGAACCTAGGATTTATCCTCTAGGTATCGG AGCTACTGCTCCTGCATTCACCGTGGATAGTCTGTCTAGCGATACTGAAGATGAGGAAGTGGAGTACAAT GAATTTTTGGCAATTCCAACATACTTAGATACGCCAACGGGTCGATACAAATTTGATCTTTTAACACCTG AAGAACTTGAACAAGCTTTGAACGAATATAATCTCTTGCCTGAGGAATTACAGGATGCAATAGACTTTGA GCCTCAATTCTCTGATGTGAAGCCAAGGATTTGGGAACCTATTACAACTGTTGAAGACGAGTTTTTAAGG GAGTCGAGTAACGCCCTTTTCTCAGTTCCCTTGACTGCTGCTATGGATCCAGAGCTCAAGGAGAAATATG AGGGCATTGGAACACCACCAGTGGATAGCGGGGCCACCACACCACTAGGAATAGCTTCAAATGGAATGGA AGTAGATTGCTATCCGCAAGGGGTATTTACTACAGATGTAAATGGTAAACCAAGAGAGTACCCCTCTGTC TTACCAACACCAACATCTGATGGACATACTGTGTGCATGGAGAAGTATGGGGAGCTTGTGTTATCACAGA GTACTCTAAGTGATGCCAATGATACAACTCTTGTGGACAACCCTTCTAGTATGGACGATGGTGTAGACCT CTCTGAGGACTTTGAAATGGAGGTAGATCCTCACAATACCACGTATGATGTGGATGTGGACCTTCTGGAG CAGGAGGATGTGGAAACACCCACGTCCTCTTCTTTTGTCGTTCAAAAGTGTGCTGAGAAACGCCAAGAAG GGGATGGTCAAGAGGTCAAGATTGGCATGGTCTTTGAGAGCAACAACAACAGTCAGGTGCCACTGTCCCC TCTGGATCTCCTGGAAGGAACTCATCATTTAAAGACCTGTGATGTACAGGCAGCCATTCCAGAGACTGAT AAATTTGGTGCCGTTGTTGTTTCATCTGGAACCGATGTGGAGGTATCCCAGCATAAGGGAACAACGAGCG GAAGAATAGTGATATCAATGCCTCAAAAGACTTGCTTTCCTGCCACTGCGAGTGAAGTGCAACACAGCAA GTTAGAGCGTATTATGATGGATACTGAGGAGGACCTCAAGTTCAGAATGGATGAGATGGCAGTAGAAGCC AACATGGCTGACCTGGAGGAGAATAAGAGCGTGGAATCAGAGTGCAGCAGAACAGAGAGCGACAGAGCTA CAGATAGAAGGGATACGAAGACACATAGTGGCCAACCTAATGGAGAGTTACAAGCTGTCATGGAGGTTGG TATGTGTCTCATGTCCCATACTGAATCTGCTCTCACAAATGATGTCAGGAGTGGGATGAAGAGTCCCAGT CAGCACTCTAAAGAAGAGGAGAAGAAAGATGATGAAAAACCAAATGGTGTTGCCAAGAGAAAATCTTTGC TGCTTACTCCGAAGAAGGTCTCCAAGAATATCACTTCGCACTCCAGCCATTTCCAAGTCACGTTAAGTAG ACCAAAGACCGGAGCACCAACGACGTCCAACACGGCCAAACCTCCACCTGCTCAGACCCAAGGTGAGAAG GACAACAAGAAGAGCTATACGCCATCATCCTGGAGGAACGAGAGTAATGGATCTACTAAGACTGGTGTCA TTCCTAGGAGGAGATCTGCAGAGAACCGACAGGCAGGTCGGTTGAACGACAAGAACCACCCAGGGCGATA CTCAGCTGATGCTGCTCACCTGGTCCAAAAGCTACAGCCCATCTTGGACATCAAGGAGAGCAGGAGAGCA GAGAGCACCTCATCAATGGAGGTGGATCCTGGAAGCATCACTTCATCTAATCGGAGTATGAGGTCAGAGG TCACTGCTAGCAGTACAACGTCAAAGTTGAGCTCAAAGAATGCTCAGAATGGCAAACCTAACAAGAAGAC AGCATTGTCCTCGAGGAACTCCTCTGAAACCAAGAGACATGAGCGTAAGCCTAGCTCCTCCAGCATGGCG TCGGACCACTCACAGAGAACTGAGTCCAGGAACTCCATCTCCTCTAGACCAAGCTCCAATAGTTCCAGAG AAGATGTGACCGCCACCACCACCACCACCAAGCCTGCTACGTCAAGTACCTCTTCACGCAGTCGACAGAG TGGCACCACAACCAGTGAAAGAACTACCAAGTCTGCATCAAAGACTAGTCAAGATACTACTCATGTAGAT GCAGCCCCCACAAGAAAGATTGCTGTTCCATCCAAGAAGTCTTCTGATCATCAAGGCAAGAAGGCATCCA CTTCTCAAAAAGATCCCCATCAAGACAAACATGGCTACAAGCCCAAGACGACAGCCCACACCCTGCATGC ATCGCCTCCAGATCTGGTCTACACCTCCCTAGTCAACGGTGAAGCATCGCAGGAGATCAAACGCCTTGAG TCGCTATGTGAGACAAGGTTTCTTCAACTCTCCAAAGCCAAAGAACAACTCCAAGAAGCTACTAAAGGTT TTGATGCCATGGCAACCATTGTCAGCTACCTTTCACATGAGGTTGATGGCTTCTCTGCACCTAATCTCAA AGCTACGAATGAAAAGCTGCAGAACCAGGTCACAATGTCGACAATTAAAACGGCTCAACAAGAAGCAGAG ATCTGTCATCTCCAGGAGGAGCTCAACATGGAGACACACACCCATGAGGAGGAGACAAGGAGAACAGAGC TCCTTCACATAGAGGAGATCGAAAACCTCACTGAAACACTCCGAGCCAAACATAGCAGAGATATCCAATC AATGGCTACTGAACACACACAAGAAATCAGGAGACTAGCTGATGGACATCAACAAGAGATGTGTGACATG ACAGCGAGTCATCAAAGCCTAGTGCATGACATTGAGGACCAACACGCAGAGCATGTGACTCAGATCAATC AGGATCACATGGATCATATGGAGGAGGTGATCAGAGGGAAAGACCAGGAGATAGAGGCTCTCAAGAGGGA TGCAGAGGAGAGAATCAGAGAACTTCAGGATGAGGTATTCAAGTGGAAATACCAGTGTGACTGTCAGACG ACGAGAACACAGGAGCTGGAGGAAGCCTTGAGGAAGGATGATAACGCCAAAGTTCAGGCGGCCATCTCTC AGTACAAGCACCTACCAGATGAGGTAGCCAGTATGAAAGCTGTCATGGAGATCAAGAATCAAGAGATACA TGAACTCAGGATAGCTAAGATGGCTCTACAAAAAGAGCATGATCTGATAGATAAAAAAGATGAGAAGATA AAGAACTTGACCGCCAAGGTGGAAGACGTCCAGGCACTCATGCAAAGAAAGACAGAATATGAGAGGCATC TTTCAACAGAGCATGTCCACCTGCGAGCTTCATACGAGCGTGAGAGTAGCGTTAATAAGAGACTATCCAT GGAGAACGAGGAGTTGATGTGGAAATTAAACCAAGGTGATAACTTTTCACCCCCTCCCCAGTTCAAAGCA ACCTCTACCCCTTCCCCTTCCCCTTCACCTACTGGCGCACGGAAAGGCTTCTCGCGATCAAGCTCCATGG ACAGCCATGAAAGCGGCGTATTCTCACCCAACCATCCGCATTAATCACGACGATGAAGTACAAGGATGGG CTCGCATGGGTCTAACAGCGCGGTGTAACCGTGGACCATCGGCAGCAATTTTTCAATGAAGTACATTGGT CTATACCGATATGGCATAAATGAAGATGTCTTGATTGTATACCCAAATCATCATCATGTGGATGACTGAG GGCTCCCCAATTCAGACCACTCAACACTTTCCCTCCATCTTGCAATATTTTGAAGAATCAGAGGATGATA TTGTAGTTTGGATTATCTCCAAGATTCTACAATGCTTATCTTAAAAGTTATTTGTTGCAATATTTCAGGA GAGGATAAAAAAAAGTGAAATAAGAATGCTACAAAGTGGCACATTATAAACAAATATTGATTTGTAAAAT AAAAACATGCATCCAAGCTGTGCAAATATCATTTGAAACAGGGATTGATGCATGTATGGAAGGTTATACA GTAAGCAAAGAATTTCAAGCAAAGAAGATCATGCCAATTTTATCATATGTCGATCATTACAACATCAAAC AGTAGGTTATAATCTAAATTCAAACTCATTGTAATTAATAGTATATTGTGTTGTACCAGTATCTATGGCA GTAGTAACTGATCTGTTTATTGGCAAACATTTCATTTCATAAACAGTAATGAAAATACTGGGTCAGAATT TCTGTAAAAATACTTAATTGTCAGAAGTCTCCTAAAAGAGTATATTTCTGAAATGATCTAGTAATACAAG TTGTGTAATGAAATAAACTTTTCTTGTCAAAGTTAAGAGCTTTAACAGTAATAAACTCAAGAGTGCAAAT ACCTTTCTGTATTCTCTCAGTTGCCATGATATAACTGTAAGCCAATTGGATATTGAATATGTGAAGCAAA GTCAACTCAAGGGATATTGAAATAATGACTATTATTTTAAAAAGATGAATAAAAGAGAAAGAGATTACAC TGTACTTAAAAACTGATGTAGTAGCCTTTGTTGTAATGATGAAACATGATATAGTATGCTTCTTTTGGAA TTGGACATAATCTTTAATAGCTGAAGGATCTTTGCTACTCTCTTCCATCTCTAGTTCTCACTCATGCCTC ATTATTAATTACGCAAGCCATGGTTTGACACACATATGATCTACATGATTTGTTTAGACTCCAGCTTTGG ACATTTTATCATGACATTATTCAGCATGATATCACACATATATTCCATTTATTTAGTGAAACAAACCAAA TTTTATCCCAATAAGTATCACCCTTGCATGCTAATTTTATGTCATCACAAAGATTGCTTTGCCAAATTTT TCTTGTGTTGTTTTGGAGTTTCGATGATTATTTCAAGTATTTACAAAAGTGGAACATGTGCTAAACTTTG TTTTAGGATGGAAATAGTCTTTTTCTTTCTTCGGTGTGCCATTTATATTTCTCTTGGGTGCCAAAGACAA AGATATATTGCCTTTATTTGAAAATCAAATGCTTTTTCTTTCTTTTTTTGGAATGTTAGTAAGTGGTTCT ATGATATTTCATTTGTTCATCTTTATGAGGTGAAAGAAATGGTTGCCATGCCAGTTATTAAACCTAGATG TCATTGAAGATCTCTGAATTTCTTAATGTATGTTGTGAGGTGTAGATGTGAGGAAGGGTTCAATGATGTA CTCATCACACATTCACAAGCGAAGAGTTCTAGCTGTAGTCCATGGTGTAACATTTGTGTGTTGGTTTTGA AGGAGTTTAATTGATTGTTTTCCATCAGAGTGTGACCTTTGACCTTTGTATCCTCTCCCACCCTGTATCT CTCTCAAAACAAGATGAATATTTCTGATTGTAAATAAAATGTTTATTTGTGTAATTATAATATTCTATTG ATTATTTTCCTTTATTTTTAAATTTTCTATCAAATTTATGCTCTCTGTAATTACCTCATGAAAGATCTGT ATATCAAGCTTTGTGTAAATGATGTGTTATTTCATAGTTAAATTATTCCTATCTAGTTAGTAGATCATGG ACAATGCACCTTATCAAATCTAACATCTGGATGATTACTACTTCTCCTAACAATCAGAATTTTTGTTATA TGTAATTGTTGTCATATCAAGGGTAAGCTATGTACAAACATACGCATCTGAAACCCTTTGATTTTGCTGT TAAAACTGGATAAACTGGATTAATAGTATCATGTTTTATTTGCTGAAACACCTGATCATGGCTGCTCAGC CAGGGGGTAATGATAGTATTCACTGCTTTGTTTCTTAGGGGAACAGCACTGTACAAATCAACTAATGAAC TGTATTTTCATATATCGGCTAAATCAGAGTTAATTTGTGATTTTGACTGATAATACTGAGATACCTTAAT GTAATATAAAACAATATGAATACTTAAAGTCAAATACTAATTGTGGAGCACCAGGTTTGTCAACTAAGAC AGACATGAGCGCAATGACAAAAACCCACTATTAATGTTTCAGGAATTACGATCATTGTATATGGTTATGA TATATATATATATATATATATATAAATGAATGAAGACTGATGCTCAGGAGCATCCAAGATAATGGGGAAA CAATGAATAAGAAAAAGAAATTTTCATATATTTTTAATGGAGAGTTGTTGCTGCAGATGTCTAGCTTTAG TAGGGTGCATTGTTCATGAACTACATTTTTGTCTATCTTAGGGAAATTAGGGACCAATCGTGAAGACTGG TTGCTTATCCCTTCTTACTGCTTTAATTGGTGCTACTCTATCAAGTGTTAGATTGGTGATGGGATTTCAT TACATTGTATCTGTAAAATCATACACAGCACACAGCACCACAATCTTCTTCAGTTGTACACTTCAAAATA GTATTCAGGATTGATGATGATGTTTTTTTGTTACCTAGGTTATATCATGATAGTTTCCTTCACATAGATA CTCTCTTTCTTTGTGTCTTCATTTCTTCTCATTCTCACCTTCCCATCTCAATTTGTATTTCTTATCTTTT TATATTATCAATAAATTTTATTTAATGTAGAGTTTCATTGCTTCATTTTTTAATAAATTATTGAAAATGT GAATAATCTCATTTTCTCATTTTACCTTATATTTGGTCAGTTCTTGGATAGTGAGTTAATTTTATGATTT ATTCATAAAACATAGGAAGCAGAACTTTGAAAATGAGTTATGTGAAATTACTGGAGCAAATAAATGAACA TATCAGTACATTTGATTACCATTTATGACTTGTCTGACAATATCTGTAGAGGCATTTTTATATGAATTAA TTAATCTGTTCAATTGAACCCCCTAATGCGAGGGTATGAAGTACGGACTGTAGATATCATAAAGATGTTT GAACTAGATGTGTAGAATATCAGACAAAATGCATTCTCTACATTCCAAACAAATATGGTAGTGATAGTTC ATTTTGATAGGAATGTTTTTATTTGATACTAAACCAGGAAACGGCTAACATCGTTTGGACCTTAGACAAA ATATCAAGCGTATTTATTTCTTTAAGAATATACTCTTTATTCTGTATGTCCCAGTCAGTCATACCCTAGT CATTCCTTATCACTACATTGTAGACATTTACTGTATTTGTTAATTAAATTTGTTATTTCATGTTATCAGT ATAATTATCAGTTATAGTTATCAGTATAAAAGCTATAATGGTTTTAGTGATTAATTAATAGAAGCCAGGA ACAAAAGAGGCATTTATGAGTCTCTTTACTTTCCAGGACATTTTTTATCTTTGAAAAAGAAAGGAAATAT TGGTAATGGACTATAACCGTCAATACAGATTGTCTTGAATAGTTTATGAAGTCAAACAGGTTTGCGATGA ATTATAACAAGTTAGGAGTAATAGAAAGGCAAGGATATGAACAAGAAACTATATACACTCTTTCTATTTC CATTTCCAACTCTAGGATTCAGTTTTAGTAAGGAAAATTCCTTTATAGCAATGAGTAGACGTGTCTGTAA GCTCCCTGTACAAGGCAACAGTTTGTATGTTGCATGATGCTCGCTCTGTAGGTTGCATCTGTTTTTGTAT ACAGTTTTGAAGTGTTCTGTCATTGTTTGTATCTGTATGCTTTTATCTTTCTCTCATTCTTCTCCTTTTA TAACTCCTTCATTTCTCTACAAAATGATTATCTCATTTCATCATGCTTTTTGTCAGATTTCTCAATTTTT AGCAAATTGATTTCTATCTGTGAGTGTCTTTCATGTTTAATAAAGATATCTAATTTGCGTCTTCTATAAA AGCATTAATGACTTCATGTCACATTGTGCAAATGATTTGTTCAGCATTTTTTCATCATTGCTTCTTATGT ATTATTTTACTTTTAACACCATACCAATTTATCATTAATAACTTTCATAATAGACATTAAATCTGTTTTG ATAGAGGAGACTGAAGAAAATATTTCAATCTGAATGTCATCAAATAAACATTTTATGTGTTTGAGATTGT ACTTGATGTAGATGGAATCAAATTGCTGCAGTCATATTAAAATAATATTAAAGCAATATCAGTGAAATTG AACTACAAATCAGAATATTTGATCACTGTTTTTCTTCTGATAGATGAAATTACAAAGGTTTTAGTGAATA CATGGCTTATCAATTCATCTGTGATCATGCTGGTGTACATACATGTTATCAAAGCACAGTGACTCTTTTC TTAATAATGACACTTAATGGTGTGTGAAATAAATTTTTAAAGCAGCATTCATTACAAACAGATAAATGAA AGAGAACATGATTTGTGTACTTTCATCTGTTCATCGCAACTGTCTACTGCAATCTGGTCGTGTGCTCGTC AAAATAAAATGTGTCGCTTTCTCGTGATGTGAAAACTAGAAATTACTTGTAGGAATGTATAGAATAATGT GCACATTTTGAATGTTACCATGGATATTGTTGAAATCCTATTGCTTTCGATCTGGTGTATTTATATATTG TGACTGTACAGTATGAATAATGCCAATATTATAATATTTAAAAACAGATAAAATATTTATTGCAGCTTCT GTGTAATACATGCTTGTCTTGTTAAAAAGGGAAAGAAATATTTCAAATGAAGCTTGAAGCTTCCTGATAT GCGTATCGGACAGAATAATCATGAACACATCTTTTTATGTAGCTGTAAATTTGTCGTTTACCCTGAATAT TTGGTTGTTTTTAAGAGAAAATGGGAAATGTGTATTTCATGTATATCTTCAAAATATTTGCATGATTTAT TTCAGGTGTACAATAAAAGTTTTTGTTTATATCTAAAATTCATGTCTCAAAATGTATTGCTTTGCC
Load query from file:
Options
E value
0.1 (Default)
10
1
0.001
1e-5
1e-25
1e-50
1e-100
Number of alignments
25
1
5
50
100
Word size
Default
2
3
4
5
6
7
8
9
10
11
12
13
14
15
Default = 11 for blastn, 3 for all others.
Matrix
BLOSUM62 (Default)
BLOSUM45
BLOSUM80
PAM30
PAM70
Gapped alignment
True
False
Automatically set to False for sequences longer than 4500 bytes
Filtering
On
Off
BLAST time is limited to 30 seconds
