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Echinobase Accession
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Echinobase Accession
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Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
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blastn - DNA query to DNA database
blastp - Protein query to protein database
blastx - Translated (6 frames) DNA query to protein database
tblastx - Translated (6 frames) DNA query to translated (6 frames) DNA database
tblastn - Protein query to DNA (6 frames) DNA database
Database
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 3.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
FASTA query sequence
>XM_003723760.3 PREDICTED: Strongylocentrotus purpuratus serine-rich adhesin for platelets (LOC763960), transcript variant X2, mRNA GTGTGTTGTGTGTGTGTGAGAGCTATACAGGCATACACGTGGACTAAACACGTCGAGCCAGACGAAAGGA AGTATTCAATGGACTTAGTACAGTTTGGAAGTTCCTCACTTTACACACCAACAAAACTTTGCGAAACAGA ACAGGCCGGTACCAGCGAGAAACAAGTCGTGTTAATTCTTACGAGTTGTGTGAGACATAACCTACTCTTG GTCACTTTGGATACCTCAGTGGCTCTGTCTGGGAACTATTATAAGGATTAGGCCTATATCGTGGACTTGT GAATGGAAGGAATAAGATTGTTTTTAGGAGGTAGACTGGTTGTGCGTTGACTTTCAAGACTTTACCCTAG GAGTTGCCCCCTTCCTAGGGGTGAAACACTGGGCATGCAATATGTCTACTCAGGTAGAGTCCAGACTGCC CATATTGCAGCCAAGGAGGTCTCTCCTACCTGGACCCAAGACACACTACCCACTCCGTAACACCGACATC AAACCACCGCACCTCGTACCATCCACTCCTAACGTACCATTCCGCCATCTGGCAGTTGGACAGCGTGTTG AGACCACAGACGGACGGGTAGGTCTCCTGCACTTCAAGGGCAAGACACACTTTGCCCAGGGATGCATGTG TGGCATCGAGCTTGACGATCCCATCGGCAAACACAACGGTTCCGTTGACGGGATTCATTACTTTGAATGT CCTCAAAGATACGGGGTGTTTGTTCCAGCACACAAGGTCCACAATCTACCTCCCCCTTCGCCTTCAAGCC CAACATCAACTCTTTCACACAATTCCAGTACTAGTATATGCAGTAGAGATAGCAAAGACTCTAAACCAAG CAGTAGAATACCCACGTTAGGTTTAGCTGGTGGAAAACTCCCAAGACCAAAGACATTACCTGTGTGCAAA GACTCCATTTCCAAGCTGAAGTCGAATAAGAAAAGCGGTAAGAACATTGATTGCGGAAGGAGCGATACTT CTTCAGAGAAGTCCTCAACATCCAGCAAGCTGTTTCAATCCAAGAAAATTAGTCCTGTACATACCAGTAT TACCCATTCTGGGTGGACAGGTGAAAATAGAACTAAAGGCAAGAGGACTACAGATACTCAGGTTAACAAA CTAAAACCAAATCATAATACTACTTTCACTGTGAGTGACAATAAACGACAGTATGCGAGGGTGACATCAC CGAAGGACAAAGCTTGTAGGAGTAGTAGTACCGAAACTAGTAGCAAGACTCTTCTTCAACGGAAACTTGC GCGCAATAAAAATGTGAATAGTAAACTCAACTCCCGCCCAAGTCTGAATGACTTAACAAGGACGTTTGAA GAAGGAGAAACAGATGAAAATAGACAAGACAAGCCAGACCTTGTTGAAGGTTGTTACTCTAAATTGAACG AGACCTTTGAGTTGGACAAGGAGGTTTCATCATTTTTCCAGGAATCTTGTTCAGGAAGCCTTGGCTGGGA CGACTCGCATTCGCTCAGTCCGCTTGAAGATAGTTCCTCTGGTCGCGAAAAATCAGATTCTAGTTTAGCG TGGGATTTTGAAGTTCCTCAATCATCAACTCCAGTGCAAATCCATCTCCAAGTAGGTTCAGATATCAGAA CTTCTATACCAGAAGAACCTAGGATTTATCCTCTAGGTATCGGAGCTACTGCTCCTGCATTCACCGTGGA TAGTCTGTCTAGCGATACTGAAGATGAGGAAGTGGAGTACAATGAATTTTTGGCAATTCCAACATACTTA GATACGCCAACGGGTCGATACAAATTTGATCTTTTAACACCTGAAGAACTTGAACAAGCTTTGAACGAAT ATAATCTCTTGCCTGAGGAATTACAGGATGCAATAGACTTTGAGCCTCAATTCTCTGATGTGAAGCCAAG GATTTGGGAACCTATTACAACTGTTGAAGACGAGTTTTTAAGGGAGTCGAGTAACGCCCTTTTCTCAGTT CCCTTGACTGCTGCTATGGATCCAGAGCTCAAGGAGAAATATGAGGGCATTGGAACACCACCAGTGGATA GCGGGGCCACCACACCACTAGGAATAGCTTCAAATGGAATGGAAGTAGATTGCTATCCGCAAGGGGTATT TACTACAGATGTAAATGGTAAACCAAGAGAGTACCCCTCTGTCTTACCAACACCAACATCTGATGGACAT ACTGTGTGCATGGAGAAGTATGGGGAGCTTGTGTTATCACAGAGTACTCTAAGTGATGCCAATGATACAA CTCTTGTGGACAACCCTTCTAGTATGGACGATGGTGTAGACCTCTCTGAGGACTTTGAAATGGAGGTAGA TCCTCACAATACCACGTATGATGTGGATGTGGACCTTCTGGAGCAGGAGGATGTGGAAACACCCACGTCC TCTTCTTTTGTCGTTCAAAAGTGTGCTGAGAAACGCCAAGAAGGGGATGGTCAAGAGGTCAAGATTGGCA TGGTCTTTGAGAGCAACAACAACAGTCAGGTGCCACTGTCCCCTCTGGATCTCCTGGAAGGAACTCATCA TTTAAAGACCTGTGATGTACAGGCAGCCATTCCAGAGACTGATAAATTTGGTGCCGTTGTTGTTTCATCT GGAACCGATGTGGAGGTATCCCAGCATAAGGGAACAACGAGCGGAAGAATAGTGATATCAATGCCTCAAA AGACTTGCTTTCCTGCCACTGCGAGTGAAGTGCAACACAGCAAGTTAGAGCGTATTATGATGGATACTGA GGAGGACCTCAAGTTCAGAATGGATGAGATGGCAGTAGAAGCCAACATGGCTGACCTGGAGGAGAATAAG AGCGTGGAATCAGAGTGCAGCAGAACAGAGAGCGACAGAGCTACAGATAGAAGGGATACGAAGACACATA GTGGCCAACCTAATGGAGAGTTACAAGCTGTCATGGAGGTTGGTATGTGTCTCATGTCCCATACTGAATC TGCTCTCACAAATGATGTCAGGAGTGGGATGAAGAGTCCCAGTCAGCACTCTAAAGAAGAGGAGAAGAAA GATGATGAAAAACCAAATGGTGTTGCCAAGAGAAAATCTTTGCTGCTTACTCCGAAGAAGGTCTCCAAGA ATATCACTTCGCACTCCAGCCATTTCCAAGTCACGTTAAGTAGACCAAAGACCGGAGCACCAACGACGTC CAACACGGCCAAACCTCCACCTGCTCAGACCCAAGGTGAGAAGGACAACAAGAAGAGCTATACGCCATCA TCCTGGAGGAACGAGAGTAATGGATCTACTAAGACTGGTGTCATTCCTAGGAGGAGATCTGCAGAGAACC GACAGGCAGGTCGGTTGAACGACAAGAACCACCCAGGGCGATACTCAGCTGATGCTGCTCACCTGGTCCA AAAGCTACAGCCCATCTTGGACATCAAGGAGAGCAGGAGAGCAGAGAGCACCTCATCAATGGAGGTGGAT CCTGGAAGCATCACTTCATCTAATCGGAGTATGAGGTCAGAGGTCACTGCTAGCAGTACAACGTCAAAGT TGAGCTCAAAGAATGCTCAGAATGGCAAACCTAACAAGAAGACAGCATTGTCCTCGAGGAACTCCTCTGA AACCAAGAGACATGAGCGTAAGCCTAGCTCCTCCAGCATGGCGTCGGACCACTCACAGAGAACTGAGTCC AGGAACTCCATCTCCTCTAGACCAAGCTCCAATAGTTCCAGAGAAGCGAGAAATGCTCGACGCAATCGCG CAACAGTCGGTTCCAACTCGTCCGGTAGAAATGTGACCGCCACCACCACCACCACCAAGCCTGCTACGTC AAGTACCTCTTCACGCAGTCGACAGAGTGGCACCACAACCAGTGAAAGAACTACCAAGTCTGCATCAAAG ACTAGTCAAGATACTACTCATGTAGATGCAGCCCCCACAAGAAAGATTGCTGTTCCATCCAAGAAGTCTT CTGATCATCAAGGCAAGAAGGCATCCACTTCTCAAAAAGATCCCCATCAAGACAAACATGGCTACAAGCC CAAGACGACAGCCCACACCCTGCATGCATCGCCTCCAGATCTGGTCTACACCTCCCTAGTCAACGGTGAA GCATCGCAGGAGATCAAACGCCTTGAATCGCTATGTGAGACAAGGTTTCTTCAACTCTCCAAAGCCAAAG AACAACTCCAAGAAGCTACTAAAGGTTTCGATGCCATGGCGACCATTGTCAGCTACCTTTCACATGAGGT TGATGGCTTCTCTGCACCTAATCTCAAAGCTACCAATGAAAAGTTGCAGAACCAGGTCACAATGTCGACA ATTAAAACGGCTCAACAAGAAGCAGAGATCTGTCATCTCCAGGAGGAGCTCAACATGGAGACACACACCC ATGAGGAGGAGACAAGGAGAACAGAGCTCCTTCACATAGAGGAGATCGAAAACCTCAATGAAACACTCCG AGCCAAACATAGCAGAGACATCCAATCAATGGCTACTGAACACACACAAGAAATCAGGAAACTAGCTGAT GGACATCAACAAGAGATGTGTGACATGACAGCGAGTCATCAAAGCCTAGTGCATGACATTGAGGACCAAC ACGCAGAGCATGTGACTCAGATCAATCAGGATCACATGGATCATATGGAGGAGGTGATCAGAGGGAAAGA CCAGGAGATAGAGGCTCTCAAGAGGGATGCAGAGGAGAGAATCAGAGAACTTCAGGATGAGGTATTCAAG TGGAAATACCAGTGTGACTGTCAGACGACGAGAACACAGGAGCTGGAGGAAGCCTTGAGGAAGGATGATA ACGCCAAAGTTCAGGCGGCCATCTCTCAGTACAAGCACCTACCAGATGAGGTAGCCAGTATGAAAGCTGT CATGGAGATCAAGAATCAAGAGATACATGAACTCAGGATAGCTAAGATGGCTCTACAAAAAGAGCATGAT CTGATAGAGAGAAAAGATGAGAAGATTAAAAACTTGACCGCCAAGGTGGAAGACGTCCAGGCACTCATGC AAAGAAAGACAGAATATGAGAGGCATCTTTCAACAGAGCATGTAACCCTGCGAGCTTCATACGAGCGTGA GAGTAGCGTTAATAAGAGACTATCCATGGAGAACGAGGAGTTGATGTGGAAATTAAACCAAGGTGATAAC TTTTCACCCCCTCCCCAGTTCAAAGCAACCTCTACCCCTTCCCCGTCCCCGTCACCTACTGGCGCACGGA AAGGCTTCTCGCGATCAAGCTCCATGGAGAGCCATGAAAGCGGCGTATTCTCACCCAACCATCCGCATTA ATCACGACGATGAAGTACAAGGATGGGCTCGCATGGGTCTAACAGCGCGGTGTAACCATGGACCATCGGC AGCAATTTTTCAATGAAGTACATTGGTCTATACCGATATGGCATAAATGAAGATGTCTTGATTGTATACC CAAATCATCATCATTTGGATGACTGAGGGCTCCCCAATTCAGACCACTCAACACTTTCCCTCCATCTTGC AATATTCTGAAGAATCAGAGGATAGTATTGTAGATAGGATTATGTCCAAGATTCTACAATGCTTATTGTT AAAGTTATTTGTTGCAATATTTCAGGAGAGGATAAAAATAAGTGAAATAAGAATGCTACAAAGTGGCACA TTATAAACAAATATTGATTTGTAAAAAAAAAACATGCATCCAAGCTGTGCAAATATCATTTGAAACAGGG ATTGATGCATGTATGGAAGGTTATACAGTAAGCAAAGAATTTCAAGCAAAGAAGATCATGCCAATTTTAT CATATGTCGATCATTACAACATCAAACAGTAGGTTATAATCTAAATTCAAACTCATTGTAATTAATAGTA TAGAGTGTTGTACCGGTATCTATGGCAGTAGTAACTGATCTGTTTATTGGCAAACATTTCATTTCATAAA CAGTAATGAAAATACTGGGTCAGAATTTCTGTAAAAATACTTAATTGTCAGAAGTCTCCTAAAAAAGTAT GTTTCTGAAAAGATCTAGTGATACAAGTTGTGTAATGAAATAAACTTTTCTTGTCAAAGTTAAGAGCTTT AACAGTAATAAACTCAAGAGTGCAAATACCTTTCTGTATTCTCTCAGTTTCCATGATATGACTGTAAGCC AATTGGATGTTGAATATGTGAAGCAAAGTCAACTCAAGGGATATTGAAATAATGAATATCATTTTAAAAA GATGAATAAAAGAGAAAGAGATTACACTGTACTTAAAAACTGATGTAGTAGCCTTTGTTGTAATGATGAA ACATCATATAGTATGCTTCTTTTGGAATTGGACATAATCTTTAATAGCTGAAGGATCTTTGCTACTCTCT TCCATCTCTAGTTCTCACTCATGCCTCATTATTAATTACACATGCCATGGTTTGACATGATTTGTTTAGA CTCCAGCTTTGGACATTTTATCATGATATTATTCAGCATGATATCACACATATATTTCATTTATTTAGTG AAAGAAACCAAATTTTATCCCAATAAGTATCGCCCTTGCATGCTAATTTTATGTCATCACAAAGATTGCT TTGCCAAATTTTTCTTGTGTTGTTTTGGAGTTTCAATGATTATTTCAAGTATTTACAAAAGTGGAACATG TGCTAAACTTTGTTTTAGGATGGAAATAGTCTTTTTCTTTCTTCGGTGTGCCATTTATATTTCTCTTGGG TGCCAAAGACAAAGATATATTGCCTTTATTTGAAAATCAAATGCTTTTTTTTTGTTTTGGAATGTTAGTA AGTGGTTCTATGATATTTCATTTGTTCATCTTTATGAGGTGAAAGAAATGGTTGCCATGCCAGTTATTAA ACCTAGATGTCATTGAAGATCTCTGAATTTCTTAATGTATGTTGTGAGGTGTAGATGTGAGGAAGAGGTC AATAATGAACTCATCACACATTCATAAGTGAAGAGTTCTAGCTGTAGTCCATGGTGTAACAATTGTGTGT TGGTTTTGAAGGGGTTTAATTGATTGTTTTCCATCAGAGTGTGACCTTTGACCTTTGTATCCTCTCCCAC CCTGTATCTCTCTCAAAACAAGATGAATATTTCTGATTGTAAATAAAATGTTTATTTGTGTAATTATAAT ATTCTATTGATTATTTTCCTTTATTTTTAAATTTTCTATCAAATTTATGCTCTCTGTAATTACCTCATGA AAGATCTGTATATCAAGCTTTGTGTAAATGATGTGTTATTTCATAGTTAAATTATTCCTATCTAGTTTGT AGATCATGGACAATGCACCTTATCAAATCTAAGATCTGGATGACTACTACTTCTCCTAACAATCAGAATT TTTGTTATATGTAATTGTTGTCATGTCAAGGGTAAGCTATGTACAAACATACGCATCTGAAACCCTTTGA TTTTGCTGTTAAAACTGGATAAACTGGATTAATAGTATCATGTTTTATTTGCTGAAACACCTGATCATGG CTGCTCAGCCAGGGGGTAATGGTAGTATTCACTGCTTTGTTTCTTAGGGAAACAGCACTGTACAAATCAA CTAATGAACTGTATTTTCATATATCAGCTAAATCAGAGTTAATTTGTGATTTTGACTGATAATACTGAGA TACCATAATTTAATTTAAAACAATATGAATACTAATTGTGGAGCACCATGTTGTGTGTCAACTCTGACAG ACATGAGCGCAATGACAAAAACCCACTATTAATGTTTCAGGAATTACGATCATTGTATATGGTTATGATA TATATATATATATATATATATATATATATATATAAATAAATGAAGACTAATGCTCAGGAGTATCCAAGAT AATGGGGAAACAATGAATAAGAAAAAGAAATTTTCATATATTTTTAATGGAGAGTTGTTGCTGCAGATGT CTAGCTTTAGTAGGGTGCATTGTTCATGAACTACATTTTTGTCTATCTTAGGGAAATTAGGGACCAATCG TGAAGACTGGTTGCTTATCCCTTCTTACTGCTTTAATTGGTGCTACTCTATCAAGTGTTAGATTGGTGAT GGGATTTCATTACATTGTATCTGTAAAATCATACACAGCACACAGCACCACAATCTTCTTCAGTTGTACA CTTCAAAATAGTATTCAGGATTGATGATGATGTTTTTTTGTTACCTAGGTTATATCATGATAGTTTCCTT CACATAGATACTCTCTTTCTTTGTGTCTTCATTTCTTCTCATTCTCACCTTCCCATCTCAATTTGTATTT CTTATCTTTTTATATTATCAATAAATTTTATTTAATGTAGAGTTTCATTGCTTCATTTTTTAATAAATTA TTGAAAATGTGAATAATCTCATTTTCTCATTTTACCTTATATTTGGTCAGTTCTTGGATAGTGAGTTAAT TTTATGATTTATTCATAAAACATAGGAAGCAGAACTTTGAAAATGAGTTATGTGAAATTACTGGAGCAAA TAAATGAACATATCAGTACATTTGATTACCATTTATGACTTGTCTGACAATATCTGTAGAGGCATTTTTA TATGAATTAATTAATCTGTTCAATTGAACCCCCTAATGCGAGGGTATGAAGTATAGACTGTAGATATCAT AAAGATGTTTGAACTAGATGTGTAGAATATCAGACAAAATGCATTCTCTACATTCCAAACAAATATGGTA GTGATAGTTCATTTTGATAGGAATGTTTTTATTTGATACTAAACTAGGAAACGGCTAACATCGTTTGGAC CTTAGACGAAATATCAACCGTATTTATTTCTTTAAGCATATACTCTTTATTCTGTATGTCCCAGTCAGTC ATGCCTAGTCATTCCTTATCACTACATTGTAGACATTTACTGTATTTGTTAATTAAATTTGTTATGTCAT GTTATCAGTATAATTAGTAACATAATTAGTCAACACGAAGCTATAATGGTTTTAGTGATTAATTAATAGA AGCCAGGAACGAAAGAGGCATTTATGAGTCTCTTTACTTTCCTGGACATTTTTTATCTTTGCAAAAGAAA GAAAATATTGATAATGGACTGTAACTGTCAATACAGATTTTCTTGAATAGTTTTTGAAGTCAAATAGGTT TGCAATGAATTATAACAAGTTAGGAGTAATAGAAAGGCAAGGATATGAACAAGAAACTATATACACTCTT TCTATTTCCATTTCCAACTCTAGGATTAAGTTTTAGTAAGGAAAATTCCTTTATAGCAATGAGTAGACGT GTCTGTAAGCTCCCTGTACAAGGCAACAGTTTGTATGTTGCATGATGCTCGCTCTGTAGGTTGCATCTGT TTTTGTATACAGTTTTGAAGTGTTCTGTCATTGTTTGTTTCTGTATGCTTTTATCTTTCTCTCATTCGTT TCCCTTTATAGCTCCTTCATTTCTCTACAAAATAATTATCTCATTTCATCATGCTTTTTGTCAGATTTCT CAATTTTTAGCAAATTGATTTCTATCTGTGAGTGTCTTTCATGTTTAATAAAGATATCTAATTTGCGTCT TCTATAAAAGCATTAATGACTTCATGTCACATTGTGCAAATTAATTGTTCAGCATTTTTTCATCATTGCT TCTTATGTATTATTTTACTTTAACACCATACCAATTTATCATTAATAACTTTCATAATAGACATTAAATC TGTTTTGATAGAGGAGACTGAAGAAAATGTTTCAATCTGAATGTCATCAAATAAACATTTTATGTGTTTG AGATTGTACTTGATGTAGATGGAATCAAATTGCTGCAGTCATATTAAAATAATATTAAAGCAATATCAGT GAAATTGAACTACAAATCAGAATATTTGATCACTGTTTTTCTTCTGATAGATGAAATTACAAAGGTTTTA GTGAATACATGGCTTATCAATTCATCTGTGATCATGCTGGTGTACATACATGTTATCAAAGCACAGTGAC TCTTTTCTTAATAATGACACTTAATGGTGTGTGAAATAAATTTTTAAAGCAGCATTCATTACAAACAGAT AAATGAAAGAGAACATGATTTGTGTACTTTCATCTGTTCATCGCAACTGTCTACTGCAATCTGGTCGTGT GCTCGTCAAAATAAAATGTGTCGCTTTCTCGTGATGTGAAAACTAGAAATTACTTGTAGGAATGTATAGA ATAATGTGCACATTTTGAATGTTACCATGGATATTGTTGAAATCCTATTGCTTTCGATCTGGTGTATTTA TATATTGTGACTGTACAGTATGAATAATGCCAATATTATAATATTTAAAAACAGATAAAATATTTATTGC AGCTTCTGTGTAATACATGCTTGTCTTGTTAAAAAGGGAAAGAAATATTTCAAATGAAGCTTGAAGCTTC CTGATATGCGTATCGGACAGAATAATCATGAACACATCTTTTTATGTAGCTGTAAATTTGTCGTTTACCC TGAATATTTGGTTGTTTTTAAGAGAAAATGGGAAATGTGTATTTCATGTATATCTTCAAAATATTTGCAT GATTTATTTCAGGTGTACAATAAAAGTTTTTGTTTATATCTAAAA
Load query from file:
Options
E value
0.1 (Default)
10
1
0.001
1e-5
1e-25
1e-50
1e-100
Number of alignments
25
1
5
50
100
Word size
Default
2
3
4
5
6
7
8
9
10
11
12
13
14
15
Default = 11 for blastn, 3 for all others.
Matrix
BLOSUM62 (Default)
BLOSUM45
BLOSUM80
PAM30
PAM70
Gapped alignment
True
False
Automatically set to False for sequences longer than 4500 bytes
Filtering
On
Off
BLAST time is limited to 30 seconds