Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.searchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_041603150.1 PREDICTED: Lytechinus variegatus KAT8 regulatory NSL complex subunit 1-like (LOC121410833), mRNA CTGCATTTTTTTTGTTGTGAGAATGGAGATCAATGCCTGAGCACGTCGCCATATTATGCGATACTTTTTT CGACGTCGTAGGTTGGCCATGGAAGTCAATGATGAATAATGTGATGTGTGTGATTGTTGGATTCATTGAT TACCCATAAGGAGTATACGTTAGGATGTGAAATTTTGACAAGAGCAAGGAAATATGTTGATCAATTCGGA AAATAATGGGTGTAACCCGCATGCATAGTCCGATCGCTTGTTTCACGAACGTGCGTGGAACCTGTCCAGG GGTCACGTGGTGTTGCTTCTCATTACCGTCCATGTTATGATTCTCAGTTTGCGAAACGTTCCGTTCGAAC ATTCGTCAGTGCAACGTTGTTTTTAATTTGACGTCTAAAGCTGATCCTCTTGTCGGTCACTGAAGTCGGA AAACGATACTCGTAATATTGATGGAGACCACATTCCCGGCCTAAGCGCGGGAAATAGCTACGTTGGTCTG GTGTCTGTCACGTGTGGTAATCGTTCGGCCTGGGCCTGGCCTCTGTTATTGTTTCCATTATCGCCTGCCT CACCTGCGGCTTTTTTTGATGGACTGATGCAGTTAACGACGGGAGCGGGCTGAACAAACATATCTCTTGC ATTATTTGTGTGTTTTAGTATTACAACATTTGTGCTATTGTAAACATATGTTATCCTAGTATTTAAAAGA AAAAACAATTTTTATCTCGTTGGACGGGTCGACTTCGAAAGCTTAGTTTAATTAGTCATGTTCTCCAATC AATGGCAAGTGTGACGCCGTACAGTGGTGCCGTTCCCACGGTACCCTGTCCGTATAGCGCTTCGCTTCCC GTCGCATGTGGTCACAGTTCCCGCTGAGGCTATGTATGGCTGCAATGGCTCCGGCACTGACTGATGCCGC GGCTCATACAGGCTCCTTCAAGTTGCCAGCTTCGCCTGCTAACCCGGGAAGCAGTGGTGGCCTGCAAGCA AATCCAAATCAGCCAACAAGCCCAGACTTGCCCTCATTGGCAAATGGTCATTCTCCGGCAGTGCCCGGTG GTGTAGGCAAGCATTATTCTCCAGGTTCGACTCCCACCACTCGGTTGAGAAACCACGAGTCCACTGTATC GCCAACTTGTTTCACCATTCACACCCACTTTCTTGAGAATAATAATCACAAGGGTGGAGAAACACTGACA ATTTCAGAGGGAAAAAATTATCAGGAATTGCAATCAAACCACTGTAACGGCCCAATCAAAAACAAGTTAA ATTCATTAATTTCCACCATCGGCTCAGACCTGGATCTAAACCTAGATCTACTCGCGAATGGTGAAAAACA TTCACAGAAAAGCATATTGAAAACGATGAATGACTCTGCCGCACCCTTGGCACAGAAAGAGGTAGACCTA GACCTGTTGAATGATAATCGCCCTTCTACTCCACCAACATCCAAAAAAATGCCGCCTCTAACAATATCAA CTACTGGAAGTCCCAGTCCAACGGGTCCAAAACACTCTGTCGCTACTCACATTGAAAATATCAATATTCG AGATAATGGTGATATCGATGAGCATGTGGAGCTTGATACTAGCGATACGTCGAGCAGTTCTCTATCAAAT GACATGGATAGTTCATTAAGTCTGTCACACTCTAATGCACTGACAACAGATACAAGTCTTGAACAAGCTG TTGATGACTGTCTTGATCCAAAGTCGGACAATGAGAGCGACTCAGATGAAAGTAGTGTGGATCTTTCTGC CACTATTGCAGAAAAATGTAGTGGAGCAAGTAACATTGTTGAAAAGGAGAAATTCAAGTCTGTTAATGTT GTTGATAAGCTAGAAGTAGGTGGTGACAGGAAACCTAGATTTATGAAAGCAGAAGTGAAGCAGGTTGAAA AATCTGTATTCAAGGTTGTGAATGATAATGACCAGATGTCCGAGGGAAAGAAAGAAGCTATCATTTTGAT TCATAAACAGTCGAAACAAGAACATCGTGCAAAGTATTTGATGGAAAAGTTACGGAGATTACAGACATGT CACGTTGGATCTCGGATATATCAACAAATAGGTTCCTTTGTAGAATCAAAACAATCCTGCAAAGAAGCTG CAAATTCTGCTGGAAGTAGCAACATTACTTGTGAAGAGTGCCGGAGGAATCGTCTTCAGACGGGTAGTAG ACCTGGCGTTCTTCCTAGAAGTAGTTCAAGTCATAGCCATACATGTCCTCTACATACAAACTCTTCTTCA GACCGGCAAAGACATTCGATAAGACCATCATGGTTACCAGCAGGAAAAAGAACTAAGCCAAGTACACATA TCTCTCAGCACTTGCGAGAAGGGAAACAAGCATATCGTGAAGTGAAATCTGTCACTGGAAGACTACGAGC AGGCCTTGGTCATGTTGAAAGCACCATAGATTCAGACGTCACCGATAGCAGCTCAGGTGGAGAAAGTTGT GATGAAGGAGATGACAGCTTACCACAAACCCAGGCATCCCGTTCATTTCACAAGATGCCTCTTCACAGAA GAGCATCATGGAAATGGGCAATAGATAGGTCAGCTATTGCAACCAGATGGACTTGGCTTCAAGCTCAGGT TTCAGATCTGGAGTATCGCATCAGGCAACAAAGTGACATTTTCCGTCAGATTCGGGCTTCAAAGGGAGCG GTAACATTAGGAGAACCTCCATCACCAGAAGACTATCTCCGAGCTCAGGCTTTGGCTCACAGGACAGGTA GAAAGTTATCACCTCTTGAAACAAAGATAGTAATGTTGGAAGGATCACACTCTATGTCCCCTTCGAATCT GTCAAGTTTACTCAGTAATGTAGACAAACAAAGTGCAAAATTAAAGCAAAGTCTTCAGAACTGCATTTCA CCGACATCAACACCATCATCGTGTTCAGAGAAAACATCACCAGCTAGACCTATGAATGGCCTAACGGACA GTGCAACAACAGTTGCATCACCATCTCGATGCGGTATGAACAGTTCTCCAAGCTACCCTGGGATTGTAGG ATTAGACCAAGTTGTAGGTTCTCCAATTCCTGTAGAAGAACAGTACTGTGCAAGGACAAGACCTGTGAGA TCATTCCGAAAACGAAAACTCATCCGATCTGCAGGTCTATATCAAGTATGTAGCAAGTCTCAGAAGCTGT CCTCCGTTCATTGTGGTTGCTTTCCTCCTCGTACCCCTTGTGTGATGTGTGGCGGTCAGTTTAACAATCT TGAACAGCATGATGCAGACCAAATTCCATCAGATGAGAGGGTGGCCAGCCTCGAGTATGCATTCCATTCT GTGTTGTCTTTCCCTGAAGAAATTCCATTGTCACTGCAGTTAGAATCCCTACTGAAGAGTGGAGCATGGC AAAGGAAACATTCATCCAGATACCTAGGAAAGAAGAAACATAACAGGTTGCCAAACAGATCCCGAGTCAA GTTGCATACCAAAGATGGCAGACTCAAGAAGTTCCGTAAGAAAGAGAAACATCAAAAGCAATTGACTGTC AGATCAAGTGGAGACTCTTCAAGAAAAAGAGAGCCAGTAGTCAAGAAAGAGACAAGGAGCAAAGATACTC TTGTTGAGAATAAAGTTGAAAAAGAATTAGGATCAGCAAATGAGGACGATGAGGATGATGCTGCGAAGTC GAGGAAACTTTTGCAACGATTGGCAAGACAGAAGTTGAAAGCCCTTCGTCATGCCAGAAGTGATAAAATA CTATCACGTTCCCGATCCCAGCCAAGTTCTATTCCTGGTACACCAAAGAATTTCATGAAAAGCTCAGACT TAAGACAATGTCGAACTGATACCAAGAATCGGCGCACCTCTGATTTAGCAAATGCTGCATTGGAGAAGAG TAGAGAGAGGAGCTTTTCGCTGCCCAACATTGAAGTTGGAGACCACAACTCTGCACCAACTACCCCTGCA TCAAATGAAGCAAGGTCACCTACCCATCATCTTTCTCATTCACTTCCTTCTGCATCTCTTCATGGTATTT TGCGAAACAAAAAGGGGATGGTGGAATCTTACGACATTGACAACATCGTGATCCCATACTCTATGCTTGC ATCAACAAGGGTGGTTAAGCTGAACTACAAGGAGATAGATACACCCAAGTGGAGAGAACTGGATATGGAG GAATTCATGTCTAACAACTGCCATGCACATTTAGAGAATGAAGGCAAAAGTGAGGATGAAGAGGAATTTT TTGAGGAAAACCTTTCAGATTCTGAGTTTCTTGAACGCCACGAGTCTTGTGAATGCCTGGAGAAGCAGAA GTTTATGGTGAGCTTTGTGGATCAGGGCATACCTGGCCGAAGATCAAGACGTTCAAGGCACAGTAGCATA GGCAGTGCTCCAGACCCCCTCTCTCCAGATCTTCATGTAGACCAGTTATCAACAGATAGGCAATCCTCAA CATCATCTCCAACACCAAGTCCTTCTCCAATTACAACTCCTGATCAACTATCAAGCAGTACCACCAGCAG TAATGTCTTCAACCTCAGTGGAAGTCGGTCACTGCGTTTTAGTGCCTTAGACCGTCGCAGATCATCAAGT ATGAGTGAAGTGCAAACACCGAAGCATGTTGAAACCCCTACCCCACCATCAACTCCTACCCCTATGAACG CTGACTTGACTTGGGTAAAGAGAGAATTTCCCTTGAATAACATTGAAATGGAAGAGATAGCCTCTTATCC ATATCCAGAATCAGAACCCTCCACTCGTCCAAGCTCTCGTGCAAGCAATGCCACTCACCCAGAGAGTGTG TTATCAAGGACAGATTCACAGGAGATGAATTTTTACATGTCAGATGGAGATAATTCAGAAACTGAACCAA TGGAAGTGGATGATCCAAATGATCCAGAATGGACAGTTGTTGAAGATCGGCATCGGCCAAAAAAGCCAGA AGGCACAACTGTGAGTGAGGGCTTAGTTCTAAAGCTTGCCAAAAGGTGAAAGAGGGTAGACTAATAATAA ATGGATGAATGGTGTTAATAGTTTGAGAATCATGGAGGCGATGATATCATATTTTGAGTTTAGGTATTGA AATGTGAACAAAAAAAGATCTCTTTCCATAAGATCTTATGATCAGGGTTTGAGCAGGTTTATGTAGTAAA TTTTGAATTCAGTCAAAGGAACAGGTAAATTGAAACCTGCATTGTGCAACTGAAATGATGACCAGGAAGT AGGTTGTATTTGTTTTGAGATCCCACTTCAAGGAGAAAGGGCCAATGTAAAGTTCCAAGTTCAAGCAGAT ACTACAGTAACAGACCTACCAACCAGTACGTTTTTGCAACTAAAATAAGTAATTTATTGAGAACAATCAT CTCTACAGTGCCTATCAAGAAAAAAGTTTACACTTTGAAAAGGCCCTGGGAATTAAAAATACAACATGTT GGTAATTTTTTCACATATATTCTTAGGTTTGGGTCTCATCTAT
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds