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BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
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Blast program
blastn - DNA query to DNA database
blastp - Protein query to protein database
blastx - Translated (6 frames) DNA query to protein database
tblastx - Translated (6 frames) DNA query to translated (6 frames) DNA database
tblastn - Protein query to DNA (6 frames) DNA database
Database
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 3.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
FASTA query sequence
>XM_030982912.1 PREDICTED: Strongylocentrotus purpuratus uncharacterized LOC100892589 (LOC100892589), mRNA GCAACTAATTTCTTTCATCGTACCACTGTCGCAGTAACAAGAGGTCACCAGTTCAAACTAGAAAAGAAAC GTAAAATCTAAATTGAGGCAGAGCGCTTTTTCACAGAGAGTAGTAAACGAATGGAATGGTCTCCCATCAT ATGTAGCAGAAAGTCCATCACTCAATTCTTTAAAATCAAATCTTGATAAGTACTGGTCACTGAAGAAGTA CAAGTTTAATCCTGATGAACTATTCAACTGTCCATGTTCATCCGTATTCCGTAACTGCGCAACGCCAAAT TCAAGAGTAACACACTATAGCGGACACCGAGAGCCAAATAGGTTTTGTATAACTTTATGCCTACTTCCAA GGTATGAGGTATGATATACGCTTCTTCTATATATAGCCTACTACAAGTCTACAAGTCCGGGTATATATTT CATACTTGGAAAAGGTCATATGATTGCGTTTTTATTTTTCCGCCCATCGACCACAACTCATGTGCGTGCT CCTGCTATACGGCTGTAACATTTTTTACGCACACAGGTAGTGGGAAATAGTACCGTGTTGAACTTTTAGG GGACAAATACGAGATACCAGCGCAGTGGAGGTGCTACTGTAAGTGTAATACTCTTGGGCGAAAACCGTAT TGGCAGGCAAAGATGTTTGGAATTCCACTATCTCTCCCTACTCTGATAGGAATTATATTAAATGTTATTT TGCTTAAATCTGAACCAAGCTCTGGAGTACTGACATGCACTAGCCCCTGTCAACAAGCGGATGCAACTGG AGCTTCAGGTATACCTTTACCACCATGTGTAATAAGTACTACAAGAAGTTGTGAAACCGATGTCACTGTA CCTATCAATCAGGCACCTGGTCCTCCCCTCCAGGTTGGCTTAGACTCCTACTCCTCCTCCTACATAGCAA CAGATGGGAATATATACCTTGATCTGGCCCCTCGCTGGAAGGCTTCGACAGATCGCATCAGCCTTTTGAC TGGATATGAAGTTAAGGTCATGTGTCACCGAAGTATTTGTGCAGCGCAATACTTCTGTGTCACAATTTCA TTCAACAGAACATTGACGGTTAATGATGCTCAGTCCGATTTCTCAGTGACTTGCCAGAATGGAGATTTTG CACAACCTGACATGGATTACGTCACCATTATCCGCAGCCTACCAAACAATGATGATAATTCAAATGAAGG AAGATTTCTTACAAAACTTCCAAAGTGTGGACAGGAATCAAATTTAACTGTATGCAACGTTGAATCACCC GTCGATTGGATCCCGAAATGGCGGCCAGACGCTACTCAAATTAAAAATGGTTCCGTGGTGGTGAATTTTT GGCCTAGCAATAAATATACGGTCTATGAAGTCTGGCTTGAGAAAGTGGGAGGTAATGAGGAAGTGGGAGG TAACAACAATGGGCAGCATTTAATAACCTTCAATACGGAAACTGATCATCCTCCTGTGCTTTTCGACAAC GTACAAGAGGGAACTTATAGAGCATATGTATGGATTAATGAAGCACTGTGTGAACAATGTCCGATGATTA ACTCCAACAAAAACATCAATGTTACAGCTATGACCCATCCTACCACATCAACCCATCCTACCACATCGAC GACCCCTCCTTACCAACCTACACCCTCTTCACATACTAGCTCCCTCAGACCGCCGAATGTCAAATCGGAA CCCAGTCTTCCATTGGCAGCAGTCTCTGGAGCTCTGGGAGGAGTCCTAGTCGTGGTCCTGATCTTGTTTT TTGTCTCCCGTACCTGCAAGTGGAGCCCTGGTGTCCCCAGCATGTTCAAGGAGACTGAGGTTGGAAGTTT TCCTACAGAGTCAGCCATGTCTCATCAGAACAACATTCCATATAGTGACTGTGATTCTCTGAATGGAACC CAGTACATCAATCACTTCACTCCGTCGAATGGAATTACCATCTACTCTGACTACCCCACCTGCGGATTCA CCAGTCCCTCCATGGTACCAGCAACTATTCACCATAACAACATGATGGCCAATGGAAGACTTATGCAGGA GAGTCAGGTTTATGCCAATTCCATGCCTTACAAACAAATGGATAGCATCAGTAAAGTTGCGGATATACAT TCCCCTATGGACGTCCAAACACCCTCTAAAATAGAACAACCGTCATCGCCTGACTCTGGTTTAGAGTCAC TATACTCAGATGGGACAATGGAGGATGGTAGAACACTGTTCTCTTTAGCTTTAACTTCTTTGGGGGATGA AGTGTAGTATAAACTCAATTCGTATATCATGTTCCTTAAAGATTGGGCTATTTTCACTCTCATTCTATCA TCAGAAAATGAAGAGTGGTGCATTACTCAGTCAAGTTATCTACAAATTTGTGTTTTTCATAATAAAGTGG TCAACGCCATATCTGAACGAGGCATAACACAGTTTAAAACGCACTTACAATAAGGACATAAGGGTAACAA GGACATTTAATGAATCATTTAGAGCATTTACTATAAAGAAATGTGTATTGTGAACACACTCTACAAAGTG GCTATCATGTACAATCTTGATATAGTTTTTTGACTATAGGGCTTCAATGGTGCTGATTACTGTTTTTAGA AGTACAACAGTTTATGACATTTTAAAATTCATAAGATGTACGGTGCTAATGAGGTCATGTTAAAGTGCGT TTTAAACTGTGTTATGCCTCGTTCAGATATGGCGCTGTAAACCATAATGGTTCGTTTTTTTATGATAAGC ATGTAAATGTAATATGCTTGGCATCTTTTAACACATATCTTTAGTAAATATACACAGGACCCTTTTTTGC ACTCAGTTGCTACAAATTTATCTACAATACAAAAAAACAACTGACGGTTTAATGCTTTATATCTAGACGT GCTTTTAAGGCATATCAGGGATTTTTGCGATATGAGAATGTGGGGGATAGAAGTGTGTGGGAGGACATGT GGCGAGTGAGTGTGTGTGGATGTGCGTGTGTGAAGGAGGATGTGTGAGTGTGCTTGAGAGGATGAGGGAC TCAATGATTTGGGATTTGCATCAAACAAGGTCCATAATTATCATGTTGTAATATCAGCAATATAGACATG GATTCGTTTACACACAAGGAAATTGATGGTTCATTGTAAATGGAGAGATTCCTATAAAAATAGTGGAAAG AGCGCCATCTGGTGCAGACATCTCTTCCACATTGATACTGTTCCAAGATACTATTCCATTCAGCTGTCGT GTAGTTATAGTATAGTATAGTTTTTTGTTGTTAATGTAAATTTGAATTTTATTGCTGAGTTTTATTGCCG AGTGAAAATCAAACTATACAACTATGAATAGAATTTGTACACATTGTGTACACATGCATCAATAAGGTTT GTTTGTAGTTTTCAAACAACATTTTCTCGTCTTTATATAAAATTGCAATAAGCAACCTTTTAAATAGTAC CTTGATGCACATCAAAGTTTATTTTAATGTGAAAAAAGATGTATAATAAATTAAAAGCTTATTGGAAAAT ACCTTGTGTGTACCAAAAGTTGTTTAACCTTAATTATGATTTATGAGATTTATGTATAAACAACAATTTT TATCTTAGTAAAAATTGCACTTTGATTTATTTCTGACGATGCCTTTTACCTTTATAAAACTGAAGTAGTA ATTCATTTGATTGTTAAATTGTTTACTATATGTGAGTGGATTCTCACTGTTTTTATGGTATGCAATCAAA TCTGTTCACTTACTATATAAACCTAATCATATTTCCTCCCCATTTACTTGTTCAATTGATACGATTTTCA AGATATTCCAACACAAGTTATTATTCAAGTCATTTGATCTTTTCAGATTAATGAATCACGAGGCTGTGTA GAAAGTTGATTATGCTCATAAGTAGAAATGTGTTGGTGGTTTATTAGTTGAAGAGGCAGACAATGAGGCC TATGTTATGTGCATTTCAATAACACGCAGTATTTATATATAGATTTTAGGTGATTTTTTTTCAACTGTTA AAAATTATCAACAAAAGTGAGAGCAGAACAGACAGAAATCATTGACATGATTGAAGAAAAGGGGAAAAGG GAAACATTATATGAATTGGTTCAACAGAATGATATTAATGTACATCATGAGCCAAATTATTGATAACTAA CATTTCCTTTTCGGACCTGATAGCACAAGATATAGGCGGAAATATGCACTGACGTATGAGGAAGTAAAAT TCCTTTTTTCTCGGTTATTGTTTATTGCATGATTAGTGGTTAGTGTTGTTACTTTTATACTTTATATTTT TATATCTTTAATAAAGAACGATGAAGACTGTAA
Load query from file:
Options
E value
0.1 (Default)
10
1
0.001
1e-5
1e-25
1e-50
1e-100
Number of alignments
25
1
5
50
100
Word size
Default
2
3
4
5
6
7
8
9
10
11
12
13
14
15
Default = 11 for blastn, 3 for all others.
Matrix
BLOSUM62 (Default)
BLOSUM45
BLOSUM80
PAM30
PAM70
Gapped alignment
True
False
Automatically set to False for sequences longer than 4500 bytes
Filtering
On
Off
BLAST time is limited to 30 seconds
