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Echinobase
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_011665550.2 PREDICTED: Strongylocentrotus purpuratus E3 ubiquitin-protein ligase arkadia-B (LOC575286), transcript variant X2, mRNA TTTGCCGCCCTCTGTCGTCAAGCAAGCGCCATTGCTACAAAGTGCAAGATTCTAGGATCGTGTCAGAACA CTGCTGCAAATACTGCTAAAAAATCATGAAATAAGCACTGAAATATGCAAAAGGTTCCCTCGGGACTGTA GGAAGTGTGCTGTGCACATTACATGTACTGGTACGTGTAATTTCTTCACAGTGTACACGCAAAGCAGACC TTGTGCTATGGATCAAGAGCTAGTGAATATAACCAAAGGTCATGTGACCAATGAAGCCTTGTCGTGGCCC GATTCAACATCTTCCAATCCAAATCAGGTCAGCAGAGGTTGTGAGTCAGCGCATGAGGCAGCCGATCTTC CTGACCGATGCTCGACGGTGGATGATGAGCCATCGTCTCAGATGGACTTTATGCCCTCGGATCCGCACAC TCCTTCCCCCGTACAGATCCAAGGAGAGCAACTCGTCGCAGAGCCATTGGTGTCTCTCGGAAATGAACCC TGTGTAGGACTCTTCATCCCACCAAACGAGGACGAAGTTGATGTTGTGTCGGTAGATGGCAATCGCAACA GCCGTTCTCCTTTCCATCTTCTTGAATTAGAGCAAGCAGCGGAGAATGCCATCACAAGACAGATCTTTGG ACAGCCTGCACAAGAGTCGGTAGACTTTGATCCAGTACGCGTAGCAAGTCAAGAGGCTATTCCCGATCCC ATGATAGCAGCTCAGGCACATGACTTAGACTATAACATGATGTCTTTGTCAACCTCGCCTCAGAATCCTT TCCAGAGTGAACCCCTCTTTTCAGACATCCTAAGCGATACCAATGGATTGGAGGACTTCGATAGCGTGCC ACATCAAGCTATGAATACCAGTGTCCACTGTCCTGCGGTAGGGGAGAGTAGGAGAACTGAGGGAAGTAAG GGCAATGGCAGGGACTCTGCTTTAGCTAGTGAACTCGAGGAAGATGGTGCAACAAGGAGGAGAAAACATG GCGGTTTGAATAAACTATTTAAAGGCAAGAAAGACACTATGTGGGCAATAAGCCCCGGTAAGCGAGACAG AACACCTCCAGTTGCGGAAGAATCTCTTCTTCATCAATCAAATAATGGTGAATTATCAGCGGGTTATCAT GCTCTGTCACCGTCATTCACCATCAGTCAGAACTCTGCATTTGAAGCTCGTGCTGCTCACTCATTCTCCG ACGCTGATAGTACTTCATCTGCTTTCGCCAGTGAAGGCGGTGACGGAAGTGTAGCCAGGCAACCCATGGC CGAGGGCAAGATACCCTGTAAGATCTCGTTTGAAGCTCGGGAACCTGGATGCCTGGATACGTCCGACGTG GAATCGCAGTTCTCCTTCAGCAGTCACGGTGCCACGATAGGATCGGACACGGTGCGATCCATGTCTCGTG CCGGTGACGTGACCACCATTGTGGACTCGAGCAGCGAGGAAGAATCCGATGTTGACATTGTGACTCTGGA TGATTCCATGAACTGCACGGATTCAAGTGGATATGGTTACGGAAGCGCAGCAATGTCAGACTATGATGTC ATTGACCCCAATCTTCCAAGTACCAGTGGCTTGCCTTTGACCCCGAGCAGACAAGGAAAGACAAGTAAAA AGAGGAATTGGTGGGAAGCAGAGACAAGTTCTGACGCGGGTAAATCAGATAAAGCTGGACCGTCCAGACC AAGGGCTGGAGGTTCTGGTCAAGGCAAAAGTCCTGTTGTAGTTGAACTTCTATCTCTGTCCAGTGATAGC AGTAGTGAAGATGAAGTGGAGGTCATTGATCTCAGAAAGGATCACTTTTCGTACAAGAGCAACCCAAACC AGCACCATAGCAGAGTAAAATCCCGGAAGAAGGAATCAAGATCGCCCGTCATTGTGGACCTAACAGAATC TGATGGGGAGATTGAAACCAGTAGCAGTTCAACTGAAGCTCACCCTTCCACATCTTCCTCTGGTAAGCAT CTACCTAGTGGAATGCACTGTCAAGCAACTCAAGACTCGTCCAGGAACGACGATACGCAACGTGTGACCT CTCCCGGGTCGCCCTCTGTTGCTCGGTATCCTACTTGTTCCCATGACAACCAATCTGCCGGTACACCAGG ATCATCATCGTCATCGTCTCTGGTGGTGAGGAGTTGTAGGGGATGTAGCAGTTCAAGGAGACACCCCCAC CATCATCATGTGGTCAGCAGGCCTTCCTGCCAGCACCCTGGTATGTCATGTAGCAGGGTCAATCCACAAC AAGGTCAGCCTGGCACGGAAACCAACGGCTGCAGCCTCAGGTCAGCATTCTCTACCACAGCCAGACAGTC ATGGGAACAACCTGAAACCGGAGAGACAACTCATGATGCTTCCGAAGAGGCCCGCGTATCATCTAGTAGC CAAGATCAGAACGATGCCCGCAGAAGAACCTCCAACTCCTCCTCCAACTCCAACTCCCTCCTTCAGCGTG CTCTAGGCTACGTTCCTCTGTTTGAGCGGGGATCAGAATCCGGTGGTGGGGCTACGTCAGGGTCAGCTCA ACCCCAACCCCAGCCACAGGACTCCCATCCTCCTGCGTCATCTACTCCATCGTCCACGGCTGCATCCATT CTGCTTAGATCACAGTTCATGGATGGACGTCATATGATGAGGGAAGGAGGTAACAGATTCCAGGCTCGGT CAGGGCTCTTTAGTTGCTCTCTTCATGGACCAGGAAGACAGCATGTTCTCATACCAAATAGAGCCCACGG TCAGCAGCATCATGTCTCTGGTCCAGCGAGGCCGATACCCCATAATCCTGCACACTCCATTCAACAACAC CACCAACAACAGCAACAAAAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAACATGTGGCTCAACAACAGC AACAACAAGCACATCAGCAGCAACAACAGCAACAGCAACAGCAACAAGGTGTGAGCTCACAGGTTGCTGG TCCTTCGTCTCCCCCGCCAGCACCTTTCCATATTGCGGGAGGTACCATGTCAGGTGCAGGTCATCTTCAG CACCCTAGACCTCACCCCCTTCAGTTGGTAGCCGAGATCCAGCTACCTCAGCAAACCCCATCGGCGTCCG TCACCCACCAACAGCTCAGGCAGAGGCAGCAATACTTGGTGGAGTTGCAACGTCGATGTCTGCAGGTCCA GCCGGTCCAACAGGTGGCTCATAGATCATACCCGCGTACCAGACCTCGCATGCCAGAGTTCAGCTTTGCT CCTGATGTGTTGCCAAGACATGTTCACTGCCAGCAGCAACAACAGCAACAGCAGCAACAGCAGCAACAAC AACAGCAGCAACAACAGCAGCAGCAGCAACAACAGCAGCAACAACAGCAGCAACAACAGCAGCAACAACA GCAGCAGCAGCAACAGCAGCAACAGCAGCAACAACAACAGCAACAGCATGAACCTGACCAAACGGCACAG TCTCAGTTGCCACAAGAGCAAACTCATCCCCGTCCGGAGCAGCTGACTACAGCTACAATAGGGGTGACCC GGGAGCTTCCAAGACCATTTTGTCACCCACAGCCCCAAGCAAGGCAACCTGTTCTTCATTCACAGAGGGA GACTGAGCTTGGCACTGGGGTTGGTCCAGATGGCAGGCAGCATCAACATCGGCATCTACACCATCACCTT CACCACTACCACCATAATGCGCCCCACCCTCACCTTCACACTCCAAACCTGTCTGGTACTACAGTTGCTC CTCTTATATCCAACTTGCTTGTACCAGATATTCCACCTATCCATACCGGTCACCCCTTCTACGCCCAAGC TCACCCTCTCTCCGTCATGAGGGCTCTGAGGGTCAGTCCTATGTATGAGGAATTAGTTCAGCTAGGAGAA CACCTAGGACAGGTGAACAGAGGAGCTTCCAGAAGCACCATAGAGAGAAATACCTTGCCACATAAATACA AGCTTCGTCATCAGAAGGAGAGTGATAGTAGTGAGGAGACGGGTGAAGTGGAGGGAGCAGCTAAGATCCC TGATGATGATATGGAGAAGTGTACTATATGCTTGTCTTATTTTGAAGATGACGAAGATGTCAGACGGCTT CCATGTATGCATCTCTTCCATGTGGAGTGTGTGGATCAATGGCTGGTGACCAACAAACGCTGTCCCATCT GTCGCGTAGACATCGAAACAAGGATGCAAAAAGAAGTCTGAAACCTGCTTTCTTATGAGTCCAGAAAGCA TGAAAAGTCCTTGTAACAGGTGCACCGCATGATGTTCACCTGTGTTTGGAATACTTGAAATGACATTGGT GAACCCGTTTTTAATTATTTTATTAAATACCTTGCATTATTTTTCTCAGTCAATTTCAACATCTCTAGAC ACTTACCGGTATACGAATAGTCATCAGTGACTTAATAATGTGGTTTATATCAAGATTTTGATTTATTTAT TCTCTTTTTTTTCTTTTTAATTGTTCGTAATGTTCTTTTTATCAAGGGGTATATGATATTTTCATTAATT TTACTTCACTTAATTATGTCCCCTTTTAAAGTCTTTGTCATAATCCAGGACTTTTTTGCAATATTTTTTA TTTTAAACAAAATCTTTGCTTTATTTCTTGAACCTAAGATAACCTTAAATAAATTTGAACTTTTCGTTTC CTTTTAAGAAATTTTTTGTACCTCCATCCCTCATATTAAAACAAAAGATGAATATTTTCTCAATGTCGTT CAATACTGCTATGTGCGAAAGATTGTATATTTTCCACTTGACCTTTTTGTCTTGACCTCTGTACTAAACC CTCACATCAATTAATGAAACATGTGATGGTGATTATAGGGGATAAGGAGTTGCATCATAGCATTGACAGA AGAGACAGATTTGTAAATAATCATGTTTAGTTAGTTACAGTACTTGATGAAAGTTTGTAAAATATAGGGT AATAGGCCTCAAAGGAAGAGAGGTGAAGGTTACAAATATATTTCTATTTTGGAATTCCATTGAGAGATCA GTCTATGAGCCTATGAATAGAAAATCATGTCTGGATGACTATACATTGTGACATAGGCTTTAATACTGTT GTAGGATTTAATAATCTTTTGATTAAAAAACAATGAAATATGTTTTGCATGATTTCGATGAATAATCTAT ATATCTGGAAGATTTCATTCCAATATTTCTTATTTTTGACAGTATATGAGTTTATGTTCCTGTATGGTTG CGAAGAGATTCTATGTCGGGATGTCTATAGACAAATATGTTACCTTACTCCCTGCTTTTTTACTGCAAAT TTTAGTCATTTCGTTATTTACTTTTTACTTCTAGGCTGATGTGAAGTTGCGTAATGTTAGTACAATACTT GAAATCCCATGGCCAGTGGGAGGATGCCGGTTACATGGGATCAATTAGCGAGATGAATGTTGATTTTTTT TTTTTATTTTGCGAGCATGTGGCTCGGATCGATATTAGAACATTGTAAATTATCCATGATAGAAATTATC ACTACCAAAATGATAATATAGAGGGTGCAATAGCTACTATCTTTTAAGTTTATATTTGTATTTATGTTTT AAAACCATTCTTCTTTATTAAAGGCTTAAACACGTGTATAGTGCACAGACTTTGCTTCTCCATTCAACCA TTTCCCAGATAATGACCTTTGTATTAAACAATAAAAAAGGGATATTAAGCATTTCTCTTCAATAGCTCAA TCCACTGTTACAGGGGTATGTCAAATCTATTTAGAAAGTGGAAGCAGTCTTGTGGCTTTTGGTTCTGTAT ACCGGTATTGGAATAATGTAAGTAGCCATTATGTGGGTTAAATTAAATGTTGGAAATATTTTGTCTAGAT GTGTTAAAAAGGAAAACATAATATTCTTTCTGGAGCCACCAGTTCCCATTAGTTTGAAATATCTTGTAGA GGATGTGTCAGAAACTTATGTGGTCGTTTGTGTGGGTCATTAGAAACCAGTTCCAATATTATTAATATAC ATGTATTCATGACATTTATAGAACATGTGAAAACACCAGATATCATTATGTGGCTGCTTGATACTTGTTT TCCCTGTAACATCAAACTTTCAATCAATCATAGTTTAAAACAGAGTCCATTTCTTGCTAAACTTGTTATT TTTGTCTCATTCATGTGAGTAAGTAGACTTATTAGCAAGTTAATAAATGATTGGTACTTTTCGTTTTGTT CACAATTGACATACAGTTGCCAATAGGAAATGTAATGTTTCCATATTAGAATGCTGCAAGATTTGAATTG TTGACAATTTACTGGGAAATTTCCAGAAACTGCTCAATACGATTTACATGTATCTTCTTGTTTAAAAAAA AGACAATTGAAAAGCATATTTTTTTTACCAGGCTTGCTTGAGTAATACTTAGAGTGAAATATTTGATGCC TAAAAGATTTCTGATTGACAAGATCTGAAAAATACTGCTCCTGTAATAACAAAATAGTATTGTCATAAAT CATTTCATATACCATTAAGAATAATAGAAAAGAATTCAGTTTCATTTGATTTTGAATTATTGATAATACT AGTAGTATGAATAAACGTTCGATCTTGCAATATTAACAAATGGTAGTGATTTTTACATGACTCGTAGGTT TACTACGATCAGGCTTACAAGATCAGACCTACAAAACTTTGCCAAAACAACCCTGCATATGTAATTACAT GTACAGTCTCATTCTGGTTATTTTATTCTTGTTTTTGAAGAAAAACAAACTAGTCCTCTTGATCAAATAT TTCACCCTGCTTTGCTGTTTAACAGTTCTTGTGAATGTTAACCATCTCTTCAGATGTGAAGAACTTGTGT TTCGTACAAATGAACTTGATTCTGCTCATGTGATTAAGACTGACCATAGTATACCAAACAATTAAAAAAA TATGTATTATGAAATAGTGTATATGAAAAAGAGGTTTAGGCTTTGTTTTATGTTTAAAGATAAAATAAAT AAACAATAGAGGTCACTTCACTGTATGAACATAATATAGCATTAGAATTGTTGCACCGTTGTCCATTTCC CTCAGAAAAGATACATTTCATACAATTCTCCAAACAATATTTTTTCTGTGTGTACTTCCACTTGACTGCC ATATGTGTTTCTTCATATGATTTTGCTCTCGTTGGAAACTTACATGCATTTGCAAGCGGAGTTTCACATT CTTTTAAAATCATTCAACACAAATCATGTGGAAAGTAGTTCAATTTTTCTGTTGAATATGTTGTTCAAAA CATTTACTGGTACTGTTAGCAGGAGCATTATATGTATCTGCTATTATATGAATTTCTTTTGAGCTGCACA CATCTGTTGAATATTACCCCTTACAATAGTGATTTAGGTGTTGAAGATGCTTGTATATTTTTCCTAGTTT GGTCCCACAGTAGAACATCTCTACATCAAATTTAAATGTGCAAATGTATTATTGTTATAAGTACAATCAT GGCTTGAGAACATGTATATGAAGCATTGGAATAAAATTTAAAAAAGAAGAAAAGAGTAAA
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???blast.numalign???
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???blast.numalign.5???
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???blast.numalign.100???
???blast.wordsize???
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???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
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BLAST time is limited to 30 seconds