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BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
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Blast program
blastn - DNA query to DNA database
blastp - Protein query to protein database
blastx - Translated (6 frames) DNA query to protein database
tblastx - Translated (6 frames) DNA query to translated (6 frames) DNA database
tblastn - Protein query to DNA (6 frames) DNA database
Database
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 3.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
FASTA query sequence
>XM_038214687.1 PREDICTED: Patiria miniata erythroid differentiation-related factor 1-like (LOC119739675), transcript variant X1, mRNA GTTGTATAATGGTCAAGTCCAGAACCTTCAGCACGATTTTGTGATCTTTTTTTGACAGTGACATTTCTGG AACTTTCATGAACGTCAGGTTTGGGGGATGGAAAAGTGATGAAACAGAAAGGCAACGATGAATTTATCGA TTGTTACCAATGAGAATAGGTTGAAAATTGCAGTGTAACATGGCTGGCACGGAAAGGAACGTTGATGTGG AAGAAAGAGACAAGACATGGGAGCACTCCCAGTCTCAGGCAGTAGACGTAAAGTCCAAGGTCATGGTCAA GTCAGCTCGGAGACTTCCCATCTACCAGTTCTCAAGATTGGATCAAAACACCGACCTACACAGACCGCCG GACAACTGGCTTCGGAGTGACGCTAAGCTGTCCAACACCTGGGTGACTGGTGAATGCACACAGTTTTCAA GCTTTGCCATGGCTGAAACATTGCCGGATACTGTTGGTGAAGTGGACGTCATCTCGGCAGCTGAGAACAT CAAGAAACTGCTGAAGATACCATTCAGTAAGACCCAGGTCAGCATGGCCGTGCACCGCGTGGGCAAGACC CTACTGCTGGATGAGCTGGATTTGTACAAGCACCTCAGAAGTGCATCGCAGGGAGAAAGAGAATGGATGA AGACCTTCCTCATACAGGCGGTGTTGTCCGAGGGGAAGAGTCTGACCATGAAACGCAAAACCAACGAGCT TCTTCAAAACTGGAATCTGTTGTCCAAGTTCCTGTACTACAGTATTGGTAATTCATCAGATGAGTCAGTT CCCCAGCAGACCTACGACTTTGAGGAGCAGCACTTACCACCGAACCAGTCTGCTCTGATCCAGATACCAG ACCTACTACCCAAGACCAAGCCCAGTGAATTTGCCCGTCAGGCCCTGTGGCAGTTTGAAGATATCCGCAT GCTGATTGGCACTGACCTGCCTATCTTTGGAGAAGGCATACACCCCGCTGTCAGCCTGAGACTAAAGGAC ATGAGCAGCCCCATCAATGTCCTGACTGGCCTAGACTATTGGCTGGATAACCTTATGTCCAATGTACCAG AGCTAGCCATGTGCTATCATCTCAACGGCATCGTCCAGAAGTACGAACTGCTCAAGACCGAAGAGATACC CAACCTAGAAGATGCTAACTTTGCTCCCCAGGTAGTGAAGGATGTCGCACAGAACGTCTTGTCTTTCCTG AAAAGCCACTGCACTAAAGAAGGACACACGTACTGGCTATTCAAAGGTGAAGATGAAGACGTAGTGAAAC TCTACGACCTGACAAGTCTGTGCAACGAGTATCCCAACAGGCCCTGGGAAAATCCCTTCATTTCACCGGT TGCCATACTGCTGTACAGAGTGGCAAGGAATCTGTCCATGTCCGGGCCAAACAAGAAGGATAAAAGCACC ATCTACAAGCTGCTGAAGAATTGTTTGCAGTTGCTGGAAGGCAGGGAGGGGAGCCATCCGGAGGTAGCAG CCTCAGCGTGTCACCTCCTGTCTCACGTCTTCATCAACGAGGACGACCTGACCGACTCCCCGCCCCCTGC TTTTTCAAGCTCCGCCTCCCAGAAGCCCTCCAAGAAGACCCCACAGCAAGCAGACTCCTCGTCTGGTGAT GATGAGGAAGAATTCGTCATCGAAGAAGAGGACGGAGAGGCGTCGCTGACCGTGCCCACCATGGACACGC AGAGCCTGATGCTGCCGAGCGGTAAACACGGTGTCTTCAAGGAGCGCAGACGACGTAGACGGTCGGCCAA GACTGTGTACGCCTCCAAAGAGGAGAAGGCCAAGAAAGCTTTCACGTACATCGTCATGGGTCTGAAGAGC ATCATAGAATGCCCCAAATCGACAGAAGCACCTAGTCAGGAACAGGCGGCCAAACTGCCAAGTCCTCTGC CATCCCCTACTCGAGTAAGGACCCTTTGCTACCCTAGTAGCTCCGTGGCGGGGGAGAGCCGGGGGAAGAC GGATCGTGCTGATGCTGAGCTGAGGCAACTACCGGAAGGTACTGGAGAAGACCAGCGACAAAGTGAACAG GAGGCATCTTACACAACAAACAAGAAGTGCGACAGTAGGGCGGAAGCCAAGCAACTTGGCGCAGAGAAGA AAGAGTCGTCAAAGAGTGATTTGAATCTCAGTGATCAAGTAAAGGAAGTTGGGATCGCATGCAGCACAGA GTCAAGAGATTCCGGTGAAACGAAGAGTGCCACTGAGGTTTCAGATTTAGAGATTGTGGTTAGTTCATCC AGCGTCATGCCGGTCGCTCCCTTCCCTGGAACGGCCGATAATTCTGGGCAGGATTTAGAGATCAGGGACA GTGCAAAACCAAAGCAACCAAATGTAAGCAAGTTGGAGACTAGCGGCCCATCAGTGCATGAAGGTATCCA ACTCAGGGATCAGTCAGATGACAGCAACGAGAGCTCTGGTTCGTCAGATACTTCGTCATGTCTCCCAGAA GACACAAAGCCATCCACAGGTGAAGAAGAACCTCTCCCACTGACCGATCTGTCCATCGCCACCAGGACCT GGCACCCGGGAAGCTGGCAGCACGAGATGAACTTCCTGCTGCTCAAGAAGGCGTGCGAGGCCTACCTTGT GCTGGCCAAGATAGCTCGTGATTCGGAGAAGTATGGACGAGCTCTCCACTTGGCCCACATGTCCTTACTC TGTCAAAGTGCTTGCCAGTCAATGGACGTAGTGAATCTACCAGATACAAACAGCGCCCCCAATCTACTCG GCGACCAGCTAGCGGTGTGCGGTGACTGCCTGACGCTACTGACGCACAATCTGGCCTCGTATCTCAGACA GAGGGAAGACTTCAAGTACTTGACGGCGGACGATCAATTTATCCTGAGAGTTGTTCAACAACACCATCCC ACTAATGAGTACGAATGGGCCGTCGATTTTCGCAACGACACTGAGCACAACCTGAAGACCAGCATACAGT GCTACATGCTGGCGCTGAGTGAAAGCAGCGACCGTGGCGATGATTACGTGACGGCTCTGACGAGAAAACA AGGCAACGCACACAACGAGTTGGGAGTCTACTACATGAATCAGGCGCTTGTGTTACGGAATAACGAAGGC AGTCTTCAAAGTGAGCAGGATCTGTGGCGCAAGAGCCTGAGATGTTTTGAGTCCGGCATTGAGATATTCG AGAGCGTGAAGGACGGGGCCAACATCGCCCTCCTGCTGTGCAACATGGGCAAGCTGATGAGACTGTGCGC CTTCAGCTTCGGCGAGAGCGAGTTCTGTAGCGGGAGCGAGATGAGCCAACAGGAACGCTCCTACTACTAC AAGGCCATTGATTATTACCAGAGGGCACTGAGGCAGCTTGGCCAGCGCAAGAAGAACCCGTATCTATGGG AATCAGTGACATGGGAACTGTCATCTACATATTTTGCCATGGCAACCATCTTGCAGGACCATCCACCCCT GTCTTCTATGGCTCAGGAACAGGTTGAGAAGGACATCATCGGACTGATGAACAATGCCTTGCATCTGTGT GAAGTAGAGGACATCACACCAGCCAAGCAGCCTGTGTATCAGTACCGGGCAGCTACCATACACCACCGCT TAGCATCTATGCATCATAATGCCTACAGAAATCAGTCATCCCTGCAGAAGCAGAAGCACACGCGCTCGCT GGCTGAGCTGCATTATCAGAAGGCCGTCAGGCTGTTCCAGGACCTGGACCGTCCCTCGGAGCTGCTCAGG GTTCTACTGGAGAGAGTCGCACTCCTGGAACACCAGTTTGAAGGTCAGTCTGGCATCAGTGCACGCATCA AGACATTACATGCAGGCCTGGAGGCCCTCCTGCAGTGCAAGGACGCGCTGAGCGCATTACATAAAGCAAG AACCAAGGAAGCGACGCAGTCTGACGTGCCTGCTGGTGCCACGCGAAATGTTGACGGAGTTGACTCGGAC GTTGTCGATCGCTGTCCGAATCCGCAAGAGTTGGACGTGGAGGAAGGCGATTCCTCTGGTTTAAGTGGTG ACAGTGAGGGCGGCAGTGTTGAGATTTTGGACTCAAAAGGAGTTTTGTTGGAAACAAGCCTGCCCAATTC TAGAACAAGAAACCAGGGACTCCAATCTGAAGTGGGGAAGGGATCATCTGATGAAGAGAAAAAGCAACAG GAGAAACTTCATGATGACTCAAAGCAGGACCTAGGTGCTCACAAACCTGCCCAGGTGAGCTCCAAGAAGA GATACGGAGTTACAGGTCAGGGGTCACATGCAGAAGGTCTTGGGTCAAAGGTCAAGGCCAGACTGAGCGA AGGGGAAGAGGAGCAGCAAAGGAAACTTCAAGTTGACTCAACGGAGGAGGCAGGCTCTCACAAGCCTGCC CAGGTCAGCTCCAAGACAAGAGCCGGTATTGGGGGTCAGGGGGCACATGCTGAAGGTCAGAGTTCAAAGG TCAAGGACAGACTGAGCAAAGAGGAAGAGGAGGAGCAGCTGAGGCTGGAGACAATGTGGGAATCCAGGCT GCAGTATATGCTGCGGAACCTGGTCAAGTTGCACAGCGCTAACAAGAAAGGGATGCAGCAAATAGCCGAC TACAAGAAGATGTATGCAGCCTCCTTGGGGAGAACCCGTCCCTCATCATCGTCCCCATCCTCCCTCTCAT CTTGCTCCTCCTCATCGTCTCTGACTCCCGAGTCCACTAAGACACTGGTCAGCATCTTGGACGAGGTGCA GCAGTTGTTCCAGGGTGTTAAATGAAAAGAGCAAACCTCTCTGTTTTGGCTGAATCAGAGCTGGAAATCC ATTTCTTGTGTGTTTTATTTGTGTGTCAGTGTTTGCAAATTCATTTTGATCGCAAACTTGCAATCGATAT TGTTTCGTTATATTTGTGGTTATAGAGCCATTTTATCAAAAGAGCCCATAGATCATTGTCACAAGTCCCC ACAAATTCTCACAATGCAATCACAAGTCAATGACATGTCATCCTATCTCATGTCAAGCTACTGAAGTAAA CTGCGACAGAAGCATTCCTTTGTTACTGTTCATCCCATGTTTAGTACATTCCTTGTGATGTCTTTGTGAT GGGACTTGACAGCAACAGTGACACTGTGACTCGCAAGCCTGAAGAAACCTGCAAAGACATCATGATGATA TGAAGAAATGTGGATCCATAAGGGAA
Load query from file:
Options
E value
0.1 (Default)
10
1
0.001
1e-5
1e-25
1e-50
1e-100
Number of alignments
25
1
5
50
100
Word size
Default
2
3
4
5
6
7
8
9
10
11
12
13
14
15
Default = 11 for blastn, 3 for all others.
Matrix
BLOSUM62 (Default)
BLOSUM45
BLOSUM80
PAM30
PAM70
Gapped alignment
True
False
Automatically set to False for sequences longer than 4500 bytes
Filtering
On
Off
BLAST time is limited to 30 seconds
