Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.searchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_030980607.1 PREDICTED: Strongylocentrotus purpuratus uncharacterized LOC575928 (LOC575928), mRNA GTCGCAATGCACTCAACTCCTCAAGATTAACGAATTCATCTTCTGTCTTCATTGACTTGCGAGCCAGTAT GGAGGTGAGATGCATATGGGACTGAGCTGAGTGAATCGATAATAGTACCCTCTAAGGCCGGATTGTCCTA CTGTTCATGGAGACATCATCTTGGTGGTACCATCACTCCAAGATGGTGCGCCTGAGACGTCAGTGCTGCA CCCTGGCGTTTCTCTTCAAGAGTTGCATCTTCCTTCTGGCCGTATCCAGTGTGCTGCTTCTTCTGCAGAG CATCTGGAGCAGTAGTAGTGTGGAGGAAAAGACGGGGGCGGGCAAGAGTGGACGGCTGAACAGCAACACC ATCAACAGCGGCGCCTTCATCGAGCGCGAGTACCTGCCCAAAGAGAAATTTGTGAGCCATTCTTCAGAGT GTGAAGTTCCAAGATTCAATAGCAACTCTACTATACCGCAAGATGTGGTATGTAAGAGAATCTCGCCTCG ACCTGGGTCATGCCAACTGGCACACGAACTGTACACTTCACAAAAAGTGGAAACTTGTAGCCATCAGGAA AAACACCAACTGTGTCAAATAAAGGGAGAAGGCAAAGAGATGGCTGTTGAATGTGACCAAGAAATCTGTC CAGGACCAGTATCCCTAGGAACTATTAACCCGGCCATCGGTGTCCTACACTGGGAGGAGCTGAGTGACAT GAAGGAACTCCAGGCCCACCTCCAGCACCTGCTCCTCACAGGCAAACCAGAGGCAGTCTTTGGCTTTTGC TTCATCAAGTGTCCCTTGGAGCTACAGGAGGTCCAGGAGGGTGGACAAGGTGGGGAGAATATTCAGGCGT ATGGACAGGATGATGTAGATGAGGATGAGGAAGAAGGGCTTGAGGATGGTGTGGAGAACAGTTTCCTGGC GTTTGAGAAGGACTACTTCCAGGAGGACGTTGATGATGAACCATGGGCGCAACAGCTGCTATTGCTTCCA TCTAAGCAACAGAAATCTCATAGCAAAGCTCAGAGTAGCAGCCCAGGGTTGAACATCAATGTGATTCTAC TAGATTCAGTTTCACATAGCCACTTCTATCGATCTCTTCCTAGAACAGTACATACTTTAAGAGAAATTAA TAAGTTAAAAGCAGGCAGTGTTTTCAACTACAACTTGGTGCAGTCTGTGAAGGGTCGCACCTACGAGAAC ATCCAAGTGCTGTTCTCTGGAGTCATGTACAACCCAGAGGAGCCCTTTGGAGTACATGACATGCCCCCTG ATCCTGTAGGTACCAAGGTACTTCTGGAAGGGTTTAAGCACATGGGGTATGAAACGTTGTGGATGGAAGA TCTCTGTTGGACTTGGGAGTGGGGAATTGCCAAGAACTTTGTGGTGCATTCACCAAAAGAGATGCTGAGC TTCCGCTGGCAGAAACTTCTAGATGCCATGAAGGAGGGAGGAGTTGATCAGCTGGGTTTAGCTTTAGCAA GCTGTGAGATCTTGCACAGAAACAACCATAATGATCCTTTCCATGGTCCACCTGCCATCTGTTACAACGG AGAATACCAGCATACTTACATGCTGCAGTACCTCAAGAGTCTTCAGAAAGCTCAGCAATTTTCAAGGACT CCATTCTTCCACTACACAGAAATCAATGTCGGTCACGATGATCTCGGCACAAGAGTCCAGGGGCTGGACA CGGCTCTTGCTGATTATCTCACATTCGCAGCATCATTAGACAACACTATGACCATCCTTCTCGCAGATCA TGGCAACGCTTACGGGTCATTCATTCATAAATCGGAGGAAGGGCGTATCGAGATGTTCCATCCCTCAATG TTTATTATGCTCTCAAAGAATGCTGGACGATTCCTCTCTCCGTCTCAGGTCCACGCCCTCGAGGTCAATC AAGATCGGCTGACCAGCATCTTGGACATACACTACATGCTCAGGTCGCTAGCGTACCCAGGTCTCAAGAC CAAAGTCGCAGAATCCCATCAAAACTTTGACATCAACCCAACTGGACTTCTGCAAGAGGTGTCCATGAAC AGGACCTGTGACCACATCCCACGTATCCAACCCAACATCTGCATCTGTGAGGATTATGACTCCAGGGTCT CCAATGACAGCAGTAGAGTGATCTTTGCAGAGTTTGCGCTCGGGGAGCTGAATAATGCAATCCAGAACCA GTTTGTAGAGGCGCACCCTGAAGCCAGGAGAGGGTTTGGAAGATGTCAGCCTCTCCAAGCTCTTAGGTTT ACGAATGTGCGCGAGAACTTTCATGGGGACGATACAATAGTCATCAAGTTGGATCTTCATGTAAAAGCTG GGAAGAATGCGTCCCAAACCGAGGAGATCTTCTTCGTCACTCTCATGGCTTCCACCAACACTCAGCCGCG AGAACAGCTCCGTCTCATCAGCTACGACCGCCTCACCGCCTACAGTCAGTATGGCGCGTGTGCAGACAAG GGCGTAGCCACCAAACTCTGTGTCTGCTCCCTTGCCAGATTGGATGCTGCTGCAAAGAAGGCCACCGAGT ACGGCTCTACCCCAAAATGGCACGAGATCTCGTCATTTTTCAGCGCGTACACTTCAACCGTGAAAGAAGT GACATCGTGCCTGTATCTTTACGAGAGGCGCACGCCGAACGGTGTTGTGTTAGAAGCGTCCTGCGAGTGC AGGGATAGGCTATACTTAGTGGAGATCAATGCTAAGTCGCAGAACATCATCGTGTCCAAAGAGTTGCCTG TTAGCATAGTCCTGAAACCAGGCATGAGGACGTTCTTGGTAGCATTTGTGCAGAGCATTCGGAGAAAGAC ATGGTCATTGGAATACAGTATGCAGTATACAGAACATCGTCTAGTCTGATTAAGTACTCTTAATTACATT ATATGTAAGTAAATATTTCAGTATCCTTCTAAATAAATCATTTTTTTAGGATAATTTGATTATGATTATA CATTACTGGTTCAGCTGAGAATTAAAGAGAATTTGAGTTCTGGTAAGAGGGAGAAATTGATGATCAGCAT TCTATAAAATTGTTTGTTTCATGTGAAAGAATTCCTGTTTGTGTTTTATTTGGTATGCCTCAAAACAATG TGGATTAAGCATAGTTACACCTGTGATTTCAGAATCTTTGAGTGACCTGGCTGAGCATACACTTCAAATG ACAGAACAAGATTTAAAATTATTTATTCACTCAAGATCTATTTAAAATCTGGACATAGCGTGAAAATATT GTGTACATTCATTTAGTCTTGTTTTAATGTATTCAACATTCCCAGAACTCAATCTTGACCTTTAACTGGT GTGACAATTAATTATGTATATATTTAATTGTAAAAGACTATCAAATTGCTGAATAATTCTTTGTAAATTC TCATGCCATGACACTTCCCTCCATATGAATATATCGTCTACATTGGGCATTGCACCTGAGGCTGGGCAGT ATAATTAGTACTGTAGATTTGTCATGAATTGGTTATCAGGGCCATTTTTCACTCTATTGTGAAAATTGCA TATATATTGCACAAACTTCAGGCTTTTTATTAATTTTTTTCTCCAAGAACAACAGTATTTTGAAATGGTA CATGAATAGAATTTTGTGCCATAAAACTATTATAGAAATTATACCTGCAGAAACTCGAGAAATGTACAAG TACCAGAGAATCAAATTTGCTGGCATATTTATATCATGTTACTGTTTGAGTGTAGTATCTGCCACTTAAA GGCACCTGCATAGCTCAAGGGCCCTTGGGAAGAGCACTACCAATATTGAGGGTACCCTAGTTGAATAAAT CATTATTTTTATGATTATGATTACTATTTTTACACAACATACGTACATGTACATGTATTATGTGTTAACA ATAAGAAATATGTTCATATATTAAGAGCATATTGAAAGATGTCCAATCTCAATTTCAATCTCACTGTTCG TTATTTAAATGTTAAAAAAGATAGTGATTTTAGTGCTGGAATTTTAAAATCCAACTATTTGTTGGTGTCT CTGAACCTCATTTGAGTATACTCAAGAGTATCTAATCATTTGGAAGTACTTGTATTTATAAATTTTGAAA GAAGATGATTTCAATGACTCTTTTTCTTTCTTTCAAGTAGGAGCATAGAATACTGTAGTAATCCAGCATC AGCAATTGAGAAAGAAATTTGTAATAGGAAGCCAGTAGATATCTCAGCTTTCAAAGAAAAAATTGAAAAG ACGAAAACAATGAATAGCAAATGCACAAGTTTTAGCTTAAGGTTTAATTGTTTACAGTTATTTTGAAAAC AATTTCTCATGATTTTTGCTTGGCTTCTTTACTGCGTACGATTCTCTTATGACTTATACTAAAAATGAAA GGTACGGTATTCAGTACTAAATGAAAAATACTCTACTTAAAAATTATTTTGTTACATTTATTTATTAACA TATTATGTGTTAAGTATAGACAGGGTTTTGCTCATGACATTTTTGTGGTATCACTGAAACTAATGTTAGC AGATTCTGCTACTTAAATTACATGTAGATTCTGTTACTTGGAATTATTGGGCGATTCCAAACAGATAGCT AAAACATTAGTACTAATGATTATTCTATGTAGATGTTAGTTATACTTTTTGCATGGTTCAAAAAATTGAT TGGTGGAACAATAGTAAGATCGGATAAATGTAAAACAAAATAATCACGACGACTAGAAAGTTGTGCTCAG AACTATCAGCTTATTGCACTTATTTTTTGTCAGTAGGCAGGTAGCAAAAGAAAAGAGTACATGTGTGTAT TTAAGAAAAATCCTAACATTAAACAGCGGATTTTGGGTGGGGGGGGCATCAACCTAGTGTCATATCTCTA GTACACAACTCTGACATTAAATTATTTTTTTTTGAGTGTTTGCCAGTTTGCTTGTCAGAAAATTTATTTC AAGGATTGTTGTGCCCCTTCCTTCTTTTACAAAATCTTGAATCCGCCCCTACTAGTAGCAGTTGTTGATT ATCACAAGAGATAATTATGAAATCCCACGTGGCGCTTATTGAATGTATATACATGTAAGTAATGGGAGAT TCCAGTCAAATACACCCATTTTGGATGTTCTGTGTATATCTCCTACCACATTGGGTGTGAAGTTTGGATG TGCAATACCGCTGGCTGCAGTCAAGAATCTATTTTGAATATCACTGTGACGTACAGACATATATATCAAG TACAATATGTCACTATTTTATTTGTATAGTCAGGAGTATAGTACATGTCATTGGAATAGTAGAATGTGTT ATAGGTCTGCATGATATATTATTTTGTAGCTATATGAAACACTTGTTATATATGTATATATGGCGGGGGA GTGTAAAGGTGAAAGAAAATACATAATTTGTAGGTGATTATTTTTTGTTTTTGTGATAAAGTGCCATAAC AAACAAAGCAAAATGAAAGGTGAATCAGTCATTTGCTTTAATTTTTATTATTGTTTAGAAGCACTTATCT AGATCTGAGCAGTTTATTCAATGACTTAATTAAGTGTGATTAATTGTTCTTATAGCTTTAGTTTAATTAT TGTAATATATAGTTCAGTAATCATATTTTGTCTATCAATGCATCTCATGTAAATCAAAATATATTTTGTT GAGTTCTATTTCATCTTTAGAGAGCCAGAAGGGTGTTAACTCATACACTGGTTCTGTTGCATATAATTTA TGACTTTCTGGCTCTCAACCGCCATGTGTGAATGTACTAAAATTTATGTAGTACTACATTAATGGTAAAG TTTGTTATATTGTCAAATAAATCCTTTTGAATATCAAAACACATATGATTCAAGGTTGTTTCATCAGTAT GAAATTTACAATTTTATTTCATTATCAAATCATCAAATCACCAAATATATACCGGTACTGGCAGTACAGT AACGGTGCACTATGTACAAAATGTGAAAAGGCATTTTGAAAGATACTTTAAGGTAATAAAAAGAGTTTTC TTACAGGTTAATTGCAACAACATTGAAGGTACTTGCTTTGAGATTGTAGAAAATCATATAGGAACATGTA TAATTCCTCAGTGACATGCCAGGTGATTTTGCTGCTAAATTTGATACAGTAAACCACAGATAATCGTCAC ATGTCCACACATGTTTCAAAGATTATACATACCGGTACA
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds