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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_030981664.1 PREDICTED: Strongylocentrotus purpuratus helicase-like transcription factor (LOC581625), transcript variant X1, mRNA CCGAAAAGCGGGAAAATTTGATCTTCGAAAATAACAACAACACGCGAGTCACGTCAACTAGCTCTAAGTT AGACCCTAACTTAGACGTCTACTAGAGATCTATTTCTAAAATTGCCCAACCAACTGAACCGAGTTTGCTG AGATTACAATATTTGTAATACCTTACTGGAGCCATGCCGAGACACAGATGGCACAAACCAAAGTCCTGGT ATTCACCAGAACCATGGGACTCAAATTATCAGAAAAAGAAGAAACAGACGCCAAATAAGAAACAGACGAC GAAGAAGAAGCGTAGCCATGGCAACCGTTATTCTCTAACCGAGGCTCTCTCACTGACGATGGATTATTTG AGTCAGTCAACATGGGATGATGGAATAGATGATCATGATCTTCTTGGATTGGATCTTCCCATAGTAACGT CGCAGGCTGGTATTGATGATGTCTTCCTGGGTATGGTTCCTGGTAATATTGTGGGTCTACAGTATTATTC TGGCACGGTCAGTAATCATGAGATGGTGTCACTTGTTCGGGAGCCTCTTAACAGATACGATAAGAATGCT GTGAAGGTAGAGAACGCGTCGGGTCGTCAAGTAGGACACATCAAGAGAGGGTTAGCTGAAGTGTTATCAT ACATCGTGGACAACAACTATGCTAGGATTGAAGGTGTTGTGCCTAGGGGCAATATGAACACATACAGTAT GCCTGTGGATATCTCCCTGTATGGACCCCGATGTAACCAAACAGTAGTCCTTCAGAGACTACGAAGTAGA GGCCACCCTGTGTCCATGGTAGAGAAGAGGGCAGGCCTGCTCAACACACCCTCACAGTCTAAGAGCAAGA AATCTTCCACCTACAATCCTAGAAGTGCCCTGGGCAAGTCGGTGATGCTGTCAGAGACAGAGATGAAGAA TGAAGTGGATACCCTTTTTGACAATCTCAAATCTCTGGACAAAACTACAGAGCAAGAACCAAGCAAGTGT ATTATTAGAAAAATGTACCCACATCAAAAGCAAGCCCTCCATTGGATGTTAGCCAGAGAGAGTAACGATA AGCTACCGACATTCTGGGATAAAACACCATCTGGTCTGTACCACAACTCACTAACCAACTTCACGAGTGC CAAGCGACCTGACAGTGTGCGTGGTGGTATACTGGCCGATGAGATGGGATTAGGGAAGACTCTGACTGTC ATAGCACTTGTCCTACATGACTTTGCAAAGCCAGAGTTTAGTGACCTCCCTCCATCTTTACCGAGCTTAC CTGAGGAAGATGAGGTGGATTGCAACGAGCCTTCGACGAGTCAAGTTAAGCAGGAAGTTAAAGATGAAGT GGTGATGATCATGGATTCTCAGGAGTTGCCCACCATTTCTGAGGAGGTGATTGTGATAGAGGATGACAGT CAGAACTCCAACAATAACACCACCATTGTGATCAAAGATGATTCACCTCCTATCCCATGTTCCTCAAGCA CTACATCAGTTACAGCTACTGGTAGACCCAAGAGGGCAAGTGCTGCCAAAGTAAAGTTCATATTCAATGA TGATTCAGATGACAATCCATCCCCTGAAAAGAAAGCTAAAAGGAAGCCGGCCAAAATGGCAGCAGGACCC AAGGTGAAAGGTCAAAGTAAACCAAAGGGTAAAGGAAAGGGCAAGAAGGCAACAGGAGGAGATGTATCCC AGAAACCACTGCCTGGACCTAGCCAACCAGTAGCCTTACTCCCTGGCCCAAGGCCGTCAATCAACTCTGT ACCTGGACCTAGCCAACCAGTAGCCTCACTCCCTGGCCCAAGCCCACCAATCAACTCTGTACCTGGACCT AGTCTGCCAGTAGCCTCACTCCCTGGCCCAAGCCAACCAATCAACTCTGTAACTGGACCTAGCCTGCCAG TAGACCCACTCTCTGGACCTAGTCCACCAAACATCTCAGTGCCTGGCCCTAGTAAACCAATGAGAGCTGA GGTTAAAGGTCATCATGGAGATGGAGATGCTGCCAAGCCCCGTGCAACTCTCATACTGTGCCCACTATCA GTTTTGTCAAATTGGATTGATCAATTCCGTGAACATGTAGCAGATGAACTGCAGGTGAATGTATGTCTCT ACTATGGAGCAGAGAAGAAGAAATTGAAGGCTGATTATCTCAAACAACAAGATGTTGTCATCACTACATA CAGTACTGTGGCTGCAGAGTTTAAAGCAAAGCAGGAGAAGGCTACCCTTCAGACGATTGAATGGCGTCGT ATCGTGCTGGATGAAGGTCATACAATCCGTAACCATGGTACCCTACAAACACAAGCAGCTCATGCTCTCA AAGCACAATGCAAATGGGCTTTAACAGGTACTCCGATCCAGAACAGTATTAAAGACCTGTGGTCTCTGGT AGCATTCCTTGGTGTGGAACCATTCAAATCAACCCATACTTGGTGGCAGAGGATCATAACCAGACCCATT GCTAACAATGACTCTGCAGGTATAGATCGAGTTCGTAAGTTGATGGACACCCTTGCTCTGCGTCGTATGA AGTCCCAGAAGGTGAATGGTAAACCCTTGGTGGATCTACCTGCCCGTAACGTTGTACTTCAATATGTAGA CTTCTCAGAGGATGAGAAGAAGGTCTATAAGACCATGGAGAAAGATGGCAGACTTGCTGTTAGCAAATAT TTTCAGCAAGGCAGTGTTCTAAATCACTATGGTGATATTCTAGCCATCCTTATGAGACTGAGACAGCTGT GTTGTCATCCAGCATTATGTGCTAAGGCCGCTGCTAACCTATGTCAAGCTATTGATGGCAATGAAAGGAC AGATGAAGAAAAAGCTCAGTTGGTAGCAACCTTGGTATCATTCCTCAGTCAAGGAGCAGATGAGGAGTGT TGCATCTGCCTGGATTCAATAGAAGATCCTGTGATCACAAGATGTGCCCATGTCTTTTGTCAGAGATGTA TTGGAGAGGTCATCAACGCGGAGAAGGAGCGTGCTTGCTGCCCTCTGTGCCGACAAGCAGTAAGCAGAGA TTCACTGGTCCATGTTCCGAAGGATAGATCAGATACTGAGAATGAAGACACTGAAAGAGAGTGGCATTCT AGTGCTAAGGTTGATGCTCTTATGGAGTGCTTGCTGACTGAGAGGGCAGCAGACAAGACGACCAAGAGTA TTGTTGTTTCTCAGTTCACCTCATTTCTTGACTTGCTGAAGAAACCTCTCACTGAGAAAGGTTTCAAGTT CTGCCGTCTTGACGGTTCAATGTCGAGGATTGCCCGTACGGCAGCAATAAGAGAGTTTAGCAGCAATGAT CCAGATTCCCCTCAAATCTTCTTGCTATCTCTCAAGGCTGGAGGAGTCGGACTGAACCTGACTGCAGCTT CTAGGCTATATCTACTAGACCCTGCGTGGAACCCCGCATGTGAAGAGCAGTGCTTTGACCGATGTCATCG TCTAGGTCAGACCAAAGATGTCACCATTACAAAGTTCTTGGTGCGTGACAGCGTAGAGGAAGCCATGCTG GAACTACAGGAAACCAAAAGACAGCTCATGAAGAATGTGTTTGGCGGCAAGAACCAAACACCGGAAGAGA GGAGGATGAACAGAGTCAGGGATGTCAAGATACTCATGGGAATGAACAAGGACAAACCGTAGATCCCCGC AAGAAAAAGGATGAACGGGAGGAATTGTGCTGGTAGTGTGAGAAAACAGTGGATGAGAGAGGAATTATGA TGGTCATGGGGTAGAATGACATGTAGATTTTAAGAGAAGGGTCAAAAGACGAGAACTTTGACAGCAATAT GAGGAATAGAACAGTACATTGCTAGAGCAGGTATGAAAGAGGGACAGTACTGTGGCTGACAAATCCTGCC CATGAGTACCGTAGTGTTGATAAATGTTTATGGACTGAAAATGGCTATTTGTTTAAGACTTGCTACCCCA ATCAGGGAACCCAGGACATCATATTAGAGGTGACACCCACAATGTTCTTCAAGAAAACCTTGATAGGCTT TCAAAGATAAGCTCATCAACTGATTCCTGATTTAATATGTACAAAAACAGTCACTCATCTACAAATTCCT TCCATTCATGGTTATATGGCAGCTGATTTTCTGTACCTGAATTTTTTTTTGTTGTTGACTTTGTTGGTAC CTGATACAAACCGTTGCCTTGTTGTAATTACATGTAATACTGTGTGGGAAAAATGTATGTATTGGTTGGA GGACCAATTTTACTGCCATGTCTAAAGCTGTAGTGCCATTCGATACTTCATTTGAGAGGGCAAAACCTTT ACAGTCATAGCTACCTGAGAGAGAAAGTTGCGTCACTGGTAGTGGCTTCTGATTGGTTAGCCATTTCATG AAGCTCCAAAATAGTTCCCTCCCATAGAGATTGTACATGGGAGGAAACTATCCAGAGCTCTACGACCCAT CTCGCCTGTGCGTAGATGCGTGTGTCACAACTTTCTCTCTCAATGCGCTATGTCTAGAGTGAGTGCAACT TATGGCATTTAACTTGCCTACCAAAGATTTTCTTAAATGATGTGAGTCTTCCATCACTGATCCAAGTATT CTAAATAGACTTTGTGTTCTCTTTGTACATACATTAACATGTAGCTTAGGTAAAATCTATGGCTGTGCCA AAGTAGATATTTTTTTTTTAAGGACATTTTTTTTCTAAGGACGTATTTATCAAGAAACATTTCCAGTACT TCTCTTGTTTGCATCTATACACAGAGCAAAGTAATTGCTACTCCGTATGTATGTACAGATGAAACATCTC TGTAGATGATTTCTAGTTCTGATGCAAGAACTGTGTAGGTTCGAAACATAAACAAGTGCCGGTAGTTCTT TTTTGTGAACTCAAACAAGACTTTTCTGGTTATTCAACCAATATTGTTTAGATGTATACTGGTTTTATTG ATGCAGTATTAAACCCCTTTACTAAAGATTTGTTTTATGGGATCTTATTTTATCCTAAGCAGCCGATAAG TTGAACCCTAACCATTGTATTGTAGCTACCGGTATATGTTGTGCTGCCTTAAAACAGCGTAGTTTGCTGA TATCTGATATTTTATTTCTTGCCATTCTGTTGTTTTACAGTGACTATCTAGCGTATTGTACAGACCTAAC TTTTTACCATGTATTTGGATACCTGTTGTTGCTTGTATACCAGTTATATTGTATAAGGTTTTATTGATGC AGTATTAAAACCCATACTTAAGGTTCATTTGCAGCTACATGTTTTGGTTCATTATACAGAACTTTTTTTA TTGAATGGTCGACTGCATTGTGCATACATTTGTTTTTATATTTGATGAAGACATCAACTTTTTTTGGAAA TAATAATATCATACTATTCAGTTGTTTCACAATGAATATCCATTGTATTGTACAGTTTTATACCACAATC TGAACATTAGTTGTTGCTTTTAGGAATTATTGGATTACGAACATCCACAGAATTTTTTATATTTTGGGGT ATTTGCAGTCCACAATTTATTCCACTAGACTTCGACAACATACAATTAACTACTAAATTATTCATACCCC TTGATGTCTGTTGTGTTTTGATTAACTCAATAATGAAAGATTGACTGGTTGATTTAGGGCCTTTGTTGAA TACTGTTAGTTGTAAGCTTTAATATGTTAAATTCTCAAGAAACACAAATTGGGGGGAAATCATTTTTTTC ACTTACAGTACTTAAAAAATTACAAAAATTTAGAAGGTTATGGAATGGATGATTAAGTTGTTAACTGTGA ATTCATCATAGATTCTTCCACAATAAGATTGATTTCATAGTGATTTTTTGAAAACTATCAATATCCCGAT TCCAAACTTTAGTTATATTATAAGCTCATCATTTGCAGTTTCAAAGTCGAGAAAACACAATTTTTTTTTT GTCTTGCTTTTCTAGATGTTTCAATCGAATGAGAAAAAAAAAGTAATTCAAGAACGATACTCCCGTCTTA TTACCTGTATTTAGGTTGGGTCATTATGTTTTTGCATTCTCAGTTTATTTGTTGTTAAAAGCAATTGTTT TCATGTCTATGGTATTAAATTAATACATACATACAGAAAA
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???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds