Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.searchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_041623777.1 PREDICTED: Lytechinus variegatus histone-lysine N-methyltransferase MECOM-like (LOC121427404), transcript variant X1, mRNA CAATCTTTCTCTCTGAACCACACTCTCAGTGCCCCTTTCTTTGTATGACGGGTAGAGAGAGCTTCCAGTG AGCGGTGAATATCTCTTGCCAGGAGTAGAAAATCAGTTTAGGGCTCTGACTGACTGAGCTGCGTATAAAC CCGGTCTTTGATTGAAGAAGCAGAATCCCTCGCGGTGGTGTCGTCCGCCTATCTTCACCGGGGATCAGCG AGCAGGGAATCTCTCGGCATTGAAAGCCAGAAGTTGGCCGTTGATAGCCGCGCTGGTTTGCAGTCACTTT CCTCATTCATCGGTGATAACTTTTAGAAGTTGAGCGTTGTCTTGGCTTTGCCGGCAGTTCTCCTTTTCAT CTTTCCTTTGGTTTTGAGAGACTTGTTGCAGTAATTTTTCTCTATTGGAGCATCACTTATTATTACCAAT GATTGTGGATGAGTTTGGGAAAGTGAAGTGCTGGGTCGACGCCAGTGAACCAGGGACAGGAAACTGGATG AAGTACGTGCGCAGCGCCCCCAAGCTGGAGAATCAAAACATGGTGCCAGTACAGGTGGATGGCAAGGTCT TCTACAAGGCCATTCATAACATAGGCACGGGTGAGGAGTTACTCGTTCTTAAAGATGCAGCCTTTCCTGA TCAAGAAGGAAACCCAATACAAATCATAGAAGAGAAGCAGTATGAGTGCGAAGAGTGTCAAAACACTTTC AGGTCAAAGGTCGCGCTGAGGAGACACCAGAAGTATGCTTGTAACAACGCCAACGCCATTTTCTCCACTC TCAATCAGGAGTTCAAAGCCAATGCAGCAATGGAGACTACCTTGCCAGTGACTGACGAGAGTCGTGCAAA TTCAATGTCAGAGTGTTCAGACGAAAAACAGGAAGAGGTTGAAAGCAGACCCAACGAAGAGTTTTCTTGC AACGAATGTGGTCGCACCTTTCACTGGAAATCAGATCTTATCAAGCATCAGGCGACCCATTTCGGCGACA GGATGTACCCTTGCGAGAACTGTGGAAAGTGTTTCTCTGATCCCAGCAACCTGCACCGCCACATCCGCTC ACAGCACGAGGGTGCCAGAAGCCATCCGTGCCCAGAGTGTGGCAAGACTTTTGCGACATCCAGTGGCTTG AAGCAACATACGCACATCCATAGCAGCATCAAGCCGTTCACCTGCGAGGTATGCTTGAAGTCCTACACGC AGTTTTCCAACCTCTGCCGACACAAACGCATGCACGCCAACTGTCGCACCCAACTTAAGTGTGCCACGTG TGGCCAGACGTTCTCTACGGTCACCTCGTTGAACAAGCACCGCCGTTTTTGCCACAATGCTCAGGTTTTC AACAGCCAGTTGAACACCTCGATCAATAGCCCTCACAACAATCCAAGCTCGGGTGTCCTCTTGCGCGGAA ACGCCCCTCTCCTCGGGATGCCACCATCTAGCGCCCTCTATCAGGCTGGTCTTGCACAGATGTGGAATGC TAATCTGCAACTCTCCCAACAGGCCCTGATGCAGAACAACCTACTTTCTGGTTCCGGCAATAGCAACGGT GTTATCAGGGGACCATATCCTCTGACTTACCCATCTCTTGCAGCCCACCCTTCCCTCTTGACAGGAAACC TGACACCTTCCGCTCTTGCATCAGCCACAGAGAGTACCAACAAGAATGCCAAAGGGATGTCAACAGAGGA ATGGCTGCAACACTACACGTTGGGTGCAGGAAGGGACAGAGAGGGTAAGGACCAGACTAGGAAGATCAAG AGGGAGAAAGAAGATAGTGAAGAGAGTGAAGCCTCGGTCAGCACTCCATGTGGAAGTGAGTTGGACTGCA GCTCCTACAGTGATGTTGAGAGTGAAGCAGATATGGAAGTCACAAAGGCCAGAAGAGTGGCTGACTTCGT CAAGAAAGAAATACCAGAGGACGAATGTATGAATGAAAGTGGAAAAATATCACCTGCAGCAAGCGAATCA TCCTTACAGAGGAATGGTAGCAGTGAACCCATCAAAGCCATTGCATCCATAGCAGATAGATTCTTCAGTG CAAATTCAGCAGGTGTAGGTTACGGCCTTCTTAAGATGAATCCCATATCAAGGTTAGGCAGTAATCACTC CCCTCCAGCTTTCAAGAAGATAGACAGTCCAGTCAAGAAACTAGAGCAAACCTTTGACCCAACCAAGAAT CTACTGAAACCCCACAAGCCTGAAGAAAGGAAAGTAGATGAGCAACCATTGGACCTGAGTGTACCAAGAC CAAAGACCAAATCCGCTGATCTTCCAGACAAAGAAGAAAGCCACTTGAGGAGACCACACATTTTTGGTAT CCCTTCTTCGCTCATTAGCAAAACAGCAGACATCCCTGTCAGTGTGGCTTTCTCTTACCCAGGATCACTT CCTTTGACCATGGACCCAATCTACAGGGTTCAGAACGGCCATGGACCCCCTCCAGATAAGTACCAAAGGA TGGACAATGGAGAGAAAGTTCCTGCTGTCCCTATTCCACTACCTCATTTCCCTCCAATGCCTAAAATTGA TTTTTATGCTGCAAATAAGAATCTGATGAAGTTCAGGGGTCTCCCATCTCACCAAGCCTATGCTTTGAAC AGCACCATGATGTATTCAGGGTCCAGTCCATCGGACAAGATGGTCATCCGCAGCAAGGATCGCTACACCT GCAAGTACTGCGGCAAGCTTTTCCCTCGATCGGCCAACCTCACTAGGCATCTGCGTACTCACACGGGAGA GCAGCCCTACTCTTGCAAATATTGTGACCGATCCTTTAGCATCTCCTCCAATCTTCAACGCCACGTCCGC AACATCCACAACAAGGAGAAACCCTTCAAGTGTCCTCTCTGCGATCGTTGCTTTGGCCAGCAGACCAACC TTGACCGCCACCTCAAGAAACACGAGAGCGAAGACTTCTCGGGAGATTCTCAGACGCCAGAGAAGATAAA CGGTGAAGATAGACCACTCCCCTTGAAGAAAAGTGGTGATTGGTCCGATGAGCTCAGCGAGAAAGACGAG GCCTACTTCACTGAAATAAAAAACTTCATTGGAGTAGCGGAGATGAAAGCTCGACGGGATCTCATGCTAA GAGAACAAGAGGAGAAGATGGCAATTGACAGGAGCAAAGACAACATTGCAAAAGATGAGGGTGGCCATCC AGAAAGGGAGTATGATGAGGGTGAACCAGAAGAGGAGAAGCAACGACGCGAGATGAAGCTCAAGTTGAAG CTTCCATTCCAGGAATCTGCTGACCATTCCAAGGTCATGATGGAAACGGACCTGTACCGTGACGATGAGG ATGACAGCATCCCTCGTACTCCGGACTCCGAGCAAGACATGCAGTCAGAAGATGCCATGTCTGTGTCTGA GTACCAAGACGAAGATGACAAAGATGACGATGCGTCTTCGACAGCCCAGCCGGATAGCTTGGGAGGAGAT GACGAGACTGGAGACCTTGAAAGGTCGCAGATAAACGGACGACACTCAAAACTCCAGGCATATTCTCTTA TGATGGCTCTGTCAGAAGAGGAGCGTAAAAAGAACATTCTATCCAAGGGACAACCATTACTCTGCCCTCC CCAACATACAGCTGCCGTTATTTAAAATCATCTCTGATGTTGCTCCTCTTACTAACAAAACCTACATCCT TTCCATATCATTTTGATATTCTCTGTTTGCTTAAAAAGCAGGTAACCTATTCCCAAAATTCAAATTTTTT TTATATAAAAAAAACTGAACTTTTGTGTAATAGATGCACATATCTAAATTAATGACTATCCTGTACAAAG ACAGGTGACTCTTCAACTTGTCTGTACTCAACTAGTTGATAAAACTGGCTGTGTTTCGTGAGTTACGAAT AACTACAGATGACTGGTGATCCTTTCTTGCGATACACAATATGTCCCTATGTAGCTGACCCAGCACTTAA GAACATGCTCCAGTCTGCTCAACTTCAGGAAACAGGTTTGTGAAACCGCCACCAGGTTCATTGATGCTGT GCCCTTATTAGCAATTCTGTCGCAGTAGGGCAGTATTACTGGGCCAGTTTACATTAGGTTTACCAGGACA GGATAACTTGTGTGCGGTACTTCCAATTACTAAAATTATCAGATAAATGTAATGGCACATATTTTGAAGT CAGGTATAACTTAGACCATGGTCTAACTCTGTGCGAAAATTATGGGAAGCCAAGAGTGTCAAAATTTGTA CTAAGTTGTATGTTCCTTATGTTTACTGTGCTCTTTCGTGATTCATCGATGATGAAGACAATCATCTATA TTTCCTAGACAATTATGAATGATTTGAGAGCCACATGAGCTGAAATATGAAATCTCTACTGTTAGCAATT TGTGAAACACTTGGCTATCCATACTTTAACCACAACTTTAAACCTGACTTCAGAATGCGGGCCAACAAGT TTAAAAAGTGAAGTTATGTTCTTTAAAAGGATGAATGAAATTTAGATATTCCAATTATCTATTTCCATCG TTGATTCTTAACTCAATAATTAAAAAAAAAATGAAATTGCATATAACTGATTGATTGTATTCAATAAATG CCGGCATCAAAATCAAAGTCCGTGCTGATCACGATAACCCATTGTGGCACCTCTACTAAATGATTGCTGT CTCTTATTGAAATATCATTGGCTGAATAATAAACTGAAATGGGTTTTTTTTTGGTAAACAATTTTTGAAG TGAAATAATGTTTTAGGCTGATTAATTCCCATATTTTAGATTATAGTCAATCTATAACAGGACATATCTA GAAAAAGCTGATTAGACTCACGTTAGAAGATTTTGGCGTGGATAAGGAACCTTTAAGGTCACTTACCTTT TTTTTAGTTCAGATATTAACCGCATCCTTTGCATGAGACATGATCATGCTCATTTTTAATCCGAGAGATG GTATTCAATACAGTTTTCATTTTTACTATGAAAGTATTCGTTTTTACCAATGCAGGTCACAATAAATTCA TAAAGGCTATAATAAGCCTCATATGGTGTTTGACAATCAGATTTCTGTATTCAAAAATAGTGAAGAGATT TTGTATCCACTCTCTGACATTTTGTTCTTTGCGATGAATGTAGCATATACTTTATTTATGAAAAATTGTA AATAGGAATCTAATGACAGATTTTGCCATGTTCATTGTTTCTACTGTACATATTTACTATTTATTAGGAA GGATAATGATTAGTATTTGCAAATGAATGATTCTTTGTGTTTGTATGTTTAAGGGAAATGTCACTGTATT GCCAATTTGACCATCTCTACTGATACTGATCGTGCCAAATGAATCAAAATGAAATACGGCTAACCCCCTT CTAATGTAAGGTGATATATTCCAATGAATTATGAAAAAAAGTCTATTCGAGGGAAACATATTATAGGGAG AATATATTGTAGTTCACTTATAGCTGAAATGTATTCAAAAGTGCTCTTTGAGACATGTAAAATGAAAAGT GCCTTTCCAGATGTTGCTTTCTTGTCAAATTAGGGAAAATAGTTTTGACAAATCTATAAATACTGGACTG CCCATGAATATTTCTTCAAAGTATTCAGATATAATGAAATTGAATGCAACTTAACAGGTTGTATTGAAAA AATTGCATATTGACAATCTGATTTTCTCTAGCTGAATAGAGTGTTCACTATTTGATATAAATTATTGATT TCATGTTTTTTTGGTTAAATAAAAAAGGCTTTGTGATGCTTAATTATTTAACATTGTACAGGAATACAAT GAATGTATTTTCAAACATTTCCTGTAGTGAATGATCAGAATTAAAATAATTCATTTTTGTTCCCCCTGGT AGGAGTTTATTGAGCTGTTGTGTTAGGCAAGATTGAAATGAAAGAGCCATATTTCCCAAAGTGATATGAT TTCATCAAGTGAAAATGAGATAGAGAGAGGCCAGCTGCTCTGCTTGTCTGTCGTTCTACTTGTCACTTCT GTGTGAAAACTCAAGAAAGCTACAAATCAGAACTTAACTTGATTGAAAAAAAATCAAAGCATAATAATGA TAAATTGGTACTTATATAGCACATAATCAAGTAAATACATACAAATCATACAAATTGCTCTGCATTTTAT ATTGAATTTTTACATTTATTGTGTTTTTATTCATTATAAAGATAAGTAAATAATCAAATAGTATGGAAAA GGGATGATTACAAAATCTGCTTTTAAATCAAATAGCATGATATTGCATTTAGTATTTTACACTTATGATA ATGAATAATTAATTGAAATTATGACCAAAAATTTACCTGAATTTTCCCTTATTCATTTCATTGTTATGAA AGAAAGCCATTGTAAAAGTATTTTCTGATGGATGGTTCACTAGTCTTGCCTTCATGCTTTGTTTTTTATT TTTCATTTATTTATACAACTTTTCCCTGTGAAGATAACAGTAAATAGGTCACAGATTTTTGACACTGTGG GCTGATAAATAGGTTGTGCTTACACTTAGTATGTAATATGTGATAGAATGCCGCTGTTTTGACGAAACAG AAGTTACTGATAATGGATGATTTAAAAAAAAAATGTTTTAATCATCTTTCAGA
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds