Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.searchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_041600350.1 PREDICTED: Lytechinus variegatus MAP kinase-activated protein kinase 5-like (LOC121408738), mRNA CACGCATGCGCATTTGATGAAGGCCGGCTCCTCCTGCGACGTCGGGATTCTGGAATTGATCCTATTAGAC TTGTTTTTGCTCCAGATATAACTCTGTATCCCAAAGGAACATGAGTGGCCAACCAGTAAAGATAAAGACT GTCTCTATCCTAGAGGAGTACACCATAGATTGGACCCAGAAACTTGGTACAGGGATCAACGGACCAGTCA GGCCATGCCAACATAAGAGAAGTGAGGAGAGGTTCGCTCTCAAGCTTCTCACTGATAAACCAAGTGCTAG GGCAGAGGTCAACCTTCATTCTCGTTGCAGTGGTCATCCTAACATTGTGAAGATTGTTGAGGTCTATTCT AACGAGGTCCAGTTCCCGGGAGAACCTGCCCCAAGAAGTCGCCTTCTGGTCGTGATGGAGCTGATGGATG GTGGGGAGTTGTTTGATCGGATCAGCAAGCAGAAAAGATTTACTGAAAGGCAGGCAGTCATTCTGACCAA ACAGATTGCATCAGCTGTATTAAGATGTCACAGTTTAAACATTGCTCATAGAGACTTGAAACCAGAGAAC CTTCTTCTTAAAGATAACTCTGAGGATTCACCGGTCAAGCTTTCAGACTTTGGATTTGCAAAGGTTGATG ATGGAACATTGATGACACCTCACTTTACCCCATACTATGTAGCACCTCAGGTTCTTGAAGCACAAAAAAG ACAGAGACGGGAACAGAAGAACCTAATCCAAACCTCGCCAAGACCATATACATATGATAAGGGATGTGAT ATGTGGTCTCTTGGGGTGATAATCTACATCATGCTCTGCGGCTATCCACCTTTCTATCCTGACACACCCA GCAGACAACTCTCAAAGGACATGAGACACAAGATCATGGCTGGTCAATATGAATTCCCTACAGAAGAATG GTCACTTATATCAGATGAGGCAAAAGATGTTGTGAAAAGGTTACTGAGGGTTGATCCATCAGAAAGACTT AACATTGAAGAACTCTGCTCACATCCCTGGCTGAAAGAGAATTCAGCACCAAACACAGAACTGCATTCTC CTGCAATAATGCTAGATAGGAATATGCTTGACAATGCTAAACAGGCCCACAGTGAACAGCTAACTGCCAT GAGAATACCTGAAAAGAAAGTCACTTTGAAACCTGTTGCTAAGGCTAACAATCCTATCGTCAGGAAAAGA ATTCACAGCAGAGGTCATTCCATAGACAACAGAACAGGAGAGGAACAGCCTCCTAGGAAACAGAACCGAG AGATTTCAGAGGGTCTCAGATGTCTTAGGAATGTTATTGCACATTGTGTAGTACCGCCTAAAGATACCAA TGGGGAAGATACACTATGTGAGCTAATGAAGAGAGCTTGTCAATATAACACAGATTGTCCCTCCCTTGAT AAAGCACTACATAACCTATCATGGAATGGAGAACAATTTTGCCATAAAGTTGACCACTCAGAACTAGCAC TTCTTCTTAAGGACATTGTAGACCAAAAGGAAAGGCATGGGAAACACTGAATCTTTCTTCTTCAAATTCC TTTTGATATTTGGTGTAGACAGACCAACAACAAAACAAGACAGTAAACAATCTACAAGGCTATTCATCAA GACAAGATCTTCAAGTTATTTCAACAGGAAAGTTCACCCTAATATCAAGTTGGTTTTAAGAACATGAGAA TATATAAGATACAAATAAGGGAGAGTGATGTGATATCTTTTTAGAATTTTGAAATTGATTTGCTATATTT CAAAAGTATAATGAAAGGAACATGAAAGAAAACTCTTGCAATGGGGAACTGCTGAAAGTGTTTGGATAGA GAGATGGCTTGATCATGTAACTTTATGCAATTGCCCCTTTTTCATTTAACCTGTTGCATACTGGAACCAG GTGATCTCGGTACAAAGGTTGTGGGTGTTAAAAAATTCAGTAGTTGATAGGTTAAAAGAATAAATCAAGG GCAAGTTTGGGTCATCTTGTCCACCTTCAGCTAAGTACTCTTTCACTGTCCATGTCTTGGAAGTGTTTAA CTCTTTCTTTTACTCTGAAATTGAATATATTTTATTTGTATGCTTCCACATCATACCATAGGTGGTCCCA GAGGTATTATGTTTCAGTTCATCCGTCCGTCCATCCGTTCTAGCGATAACTGAAAGAATATCTTGCGTAT CAACTTACAACTTTAATAGTCTAGGTATACATACAGGAGTGGCAATGATCCAATTATTTTCGGGGGTATC AATGCAAGAAAATCTTGGAAATAATAGAACTGTTTGAGCTTTCAACTTCAAACGTGGCTCTTTGCATGCA GCTGGGAGTGGCATTGATCTGAATAGATTTGAGGAATAGTGAGGTCTCAGAGGCCATTATATACATTGTA ATGCCTTGTTTTCGCGATGCCTGAAGGACAACAATCCAATTAGATTCAGGGTCATGAAGTCAAAGGTCAC TTGTGAAAATATCTCTTTCACACAATAATTGAAGAATCTTCTTTGAGGTATATCTTCAATCTTGCTTTAC GTTTGCATGTATGGGTCATGATGATCTGCATTGATTTTGGGATTTCAATGTCACTGGAAAAAGGTCGAAG AATTTGTTAATTTTAAATTCTAGAGGCTTGGTGTATAGTATAGGGGTCAGGCCAATGATGGAAAAGTGTA AAGATCACTCGTAACTTGATTAGAATTATTGTGCATCTATGAATCAGAAAAAGATCATTTTTATATATTT AATGGACCAATTTATTAGTGGGAATATTTTAAATATAGAGTACATTTTTGAGATGCTAGGCTGTTTCTTT ACTTAATATATGTCTTGTTTCCTTACTTATTATCAGGGTAGGCTACCCCAGGGTGGTGTTTCATAAAGTT GTTCATAAGTTATGCACAGCTGGAACATGTTCTTAGGTGATAAGTTAGCTGCATATATCATTTAGCACAA GAAAGGATCACCAGTCATGTGTAAGGTCAGGCATAACTTAGGAACAGCTTTGTGAAACATTCCCCTAATT GATTATATTCCATGTATAATGAGAAGTTTTACACTGTAATCACCAGAGTAGTTCATGTATTTATCCACAT ATAACAAATCTATATTTTGGCCATTATGTACAGTATTGACATAGCTTATACACTAATACACTTGGAGGGA CAAAAGATATGCTGTAAGATCCAGTCTGAATAAGATGTTTACTTCTTTCTTTTTGCACAAAAATGGTGCA TTTCACCCTTTGAGCTTGAATATGATATTTGTTTCTCATATGAAGTTAATTTCTTTCTTTTATGATACTC TTTGTGGTCAAAGAAAGCACCCTGGCTCTAACTATTTATGCATGATAGCATTTCATTGCATAATACCTAT CAGGTACTTATCCCCCACCTGGGTTGTCTGTTGCAAACGTAGATTGATGATTTGCCTAGTCATAATTATG TTTCAGTGGCAGGATCCACAAATTTTTAAATCATGATTGGGGGCTGTGTCTTAAAGCTGTGTGAAAAGAT GAAAGCAGCTATGTGGCAAGTTCCCCCAAGTCTTCGCAGTCTCCCTTGTCTGCGCACATGCGTATCTGCA CGATTCTAGTAAAAGAAGATATGCAAAGAACACAAACTTTACACATGCAATACATAGACAGATATTCATT AAATCAGATTAAAAATGGTGGAATAATAATGAATTTTGGATACTTCTTGTGACGACCTCAAAATGAAGCC TTTCTCATCAAAATCCCTGAATCGCGTTCAAAGTGAATCGGTGCGCAGACATGGGGCACCATTTTTTGTT CAATCTGAAAATGACTGCCCTAGGTTTTTTCCAAGAAAATCATATTTTTCAAATTTTATGAGATATTTGG CATGCTAACTCATAATGATGTACGGAACATTATCAACATTAACCTTAACTAAAATTGTTAGGTGCGCAGA CTTGGGGACCACCATCATACAAAGCAAATGGAATCTGAGAATCCAAGGCGGTTTATCCTTGTCAGTCCAT TCATATTAGCTAAAGTTGAAGGACACTGATATTAATTCACAACATTACTACTAACATAGGTGGTTAGTAG GCCTACAGTGTGTATGCAATTTCAATGAGATTCTTAAATGAACTGCAAGATTTACTTGAATTATAAACCA TTTGGCTCATATTTTGGCATTCTATATTCAAGTTGTTCATAGAGCCATGTGTAACTTTAAGAACAGCTTT GTGAAACACCCCCCCCCCCCTCTCCTGAAACTTATCCATTACTGATGCTTTTTCAGGAAGCTGGTCCTAA GCTTACTGGTGAAATACTCTTGGGTGCCAATCAAACTCAATCATTTTCATTCACATCAACTCGAGTTGAA ATATAATGTTTACCAGTTAAGGAATTCTTATGATTTACAGGTATTGGAGTTGTACGTTAACAGAAAGGAA GTTTGTTCATCTCATTAAAAGAACATGGTTCAGTTATTCATGAAGTAACTTTGACGGCATAATGAAACAA CCCTTTGAACACAAAGACAAAATCAATATGAATTTGAATAGATAGTACTTGATGACTGCCACTGATTTGT TTGTAATTATGGTTAAAATGATTGTATATTTGTCCATAATGATCTCAGGTTGTGTTCAAAGTACAGTGTA TACAGAGAAGAGACATTCCAGCTAAGCTAGAGAATTGTGTTAGTAACTGCAAATCTTAGCTGGTTTCAGC TGGTTCTAATTGTTATTGTAATAAAGTTATCTTATTGATTTAAATCTGGACCTTTTGTAACATGGGTAAC ACTTCCTTGTGATACCATAGAACTGTGTTGCCATGCCAATGATATATAAAGGCTAATCAATAATCCGTGG TAGATAATATTAGCTTATTTTTGAAGGTGCAAGGGGAACTTCATGTACTTCTTTTGACTGGTCATGCTAA ATCAATATTCAGAGTACTGCCCTGCTGACTTGACTTCAGAAAGATCAGAAGTGTGTAACTGATATTTCAA ATGGACATTCTGTATATAGCAGTACAGAAGGAGGTGATGATCATGTGATGAAAAGGAGCATCGTGATAAT GCAAAAATAACAATTCTAGATCATCCATGTAATAACTCAATATTACATTTTCATGCCTTGACTCCATATA TACTCTGCCAATATTTATGGGTATTCTTCAATAGATGTGGGGGTATAATTTATATAAAGCAAAGTGAGAA TTTCAGATTTTTGTGAAGAATTGATATTTTCTTTCTTCATAATTTGGTCATTCATTTCATTATATCTACC ATCAATTTGGGCTTATTACCATTTAGTCTGCTTGGTCTAATACCCACTTATGTAATTTGCACCTGCCCAG TTGGTAGAATTTCCACTTCGTTTTATTATTTTTTATACTTTCTCAAATGAAAATTTGGTAAATGAGCAGT TTGTCTTACCTAAGCAAGTGGATATATGGGTAAAGCTAAAGCAAGAATAAGAATAAATGGTAAACAGAAT ATAGAGTGGCAAATAGACTGAAAGGTTATTTGGTTAATTTGTTGTAGATGAAGTAGGATTATAGTTAGAC CATCTGAGATAAGACCACATGGGCAATAAACAAAGTGGTTGTTGACCAAATGGCAATTTATCCATCATAT TACATTACCTGTGTGGCCATAGATTTTACTACTTCTTGTATTTTTTAGAAATTCATTAGATCTTTAGCCT GATTTTTTTTGGAGGGGGGGGGGGGTGGGGGCCTAATTACACCTTTGATTTTCCCTTTTTTTACATGGCT TTTGATTTTAGTTGGATTCCCTTTTAACTTAACGTCATACACACTTTATTGAAGAAAAAAAGTCAATCAT ACAATTTGTCTTTGAGTGGATGCACATTCAAGTAAGGTTATTGTTCTTATTTAGCCTGTTCATTTAGAAT TGTATATTAAAAGTGAATTGATAAGTTATTTCCAGTGTTAAAAAAATTCCAGCATTTATTTTTATACAGT ATGTGTATGTATGTTTGTAGCAGTGAAAAATAAATGTATTAGATGTGCCTGACCTTTTTTTTACAAGAGC ATGCAATATCTGATTTTTAGAATTTAGATTGAGCTTCCAATGATAAAAATTTATTAAAGTTGAAAAACAC AATGAGTGGTATCGATTGCATTGTACTGAAGAAATGTGTTAAGACTAGATTGATATTATGTAAATATTGC AAAAATGTAGACAGAATTACCTCAAACTGCTCAAAGAATTGTGTGATTTGGGTTTCTACTTATTTGGCCA TTCTTATTGAATGATCAATAATAATAATAATAATAATAAAAATAACAATGTAACCAACTCTCAATGATGG ATGTGTGTGATTAAAAGATTATTGAAACATTGTACTTCTTGTTTGTTACACATTGTCAATTTCACTGCCA ATATAAGTTAATTTTTATAGGCCCTGTTGACTGATTAAGAATAAGCTGTAATTACTTCATAAGTTGACCC TTTTTTTCTTTTTCCAAGACTATGTGCAAGGCTCCAGACTATTTTTTGATTGCCCGATCAGTCCACCAAA ATCATTGGTATTAATGATCATTGACAGTGGATTATGGCAGTCTTAGTTTGTGATTTTGTAATACAGACCT CAGACTAATTCTGCAAGAATAGGTGTTGTAATTGAATAATAATACAATGTGTTTTGTTCATCTTAAACTA TCATTTTGTTATCCATGCAATATAAATTCAGGTAACAAATTAGTACTTTATGTGCAAAAAATATTTTCTG AATAGTGTACTACATACTACAAAATTTTAGTTTAGTTTATGGTTGATTTGCTGAATCATCTTTGCAATAG AGGTTCTACTTTACTGATATATTTTATATTATTACATTTGATTAATTCAATAGCATTCATAAAATTTGAC TTTATATGGTTTTATATGGTCTATCTCATTTTGTATTTCTCATTAGAGATGTAAGTGTACAAAAACTAAA AGTATTGTTTGTATTAATTGAGTATGGAAATGTATTTTCACCCATACTTGATGTTCAGTTGATCTGAAAC CTATGTATTTCTGTATGAATATTTTCTTGTAAACTCTTATTATTTATAGTATACAAACCAGAAGTTGAAA AGAATATAAGGAAATCCTGCGTTTTCAAGCTTTGATACTTTTTATCTATGACTCCTCCAAATACAGCTTA CTAATTTTAATTTCATGTTTATCACACGTTTTTATGAATTAATCGTGAAATGTTTTAAAAAACTTTTTAG AGAGATATTTCATGAAATAATTTTGGTTCCACTTCCTAATAGGAAATCAATTTTTTTGGCCATCTTTGAT TATTTGAAAACCCACTCAAGAATATGGTTTGTATATACCATTATGGTCTTTTAATATTTGACAGGTCAAA TTATATTTTTCAAAATTTTATATTATGTAGTAATGACTACATGAATTTACATTTTATTGCAATTATGTAA TGTTTTTTTCTTTTAGAGTTGCTGCCTTCATGATGTCATTACTTGGCAGATGTTATTTACTTATATTCTT GTCTAAGAAATAGAGGATAATGGTTTGTGGAAATTAGCATGTATTGCTTTATAAAGACATTTATGGAAAC CT
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds