Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.searchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_011685469.2 PREDICTED: Strongylocentrotus purpuratus forkhead transcription factor P (LOC577677), transcript variant X4, mRNA TTATCGTTGTCAGGTCCGGCGAGAAGCCGTACACAGGCTCAATGTCTTTTGCATTCAAGATTCGAACAGA TTTCGGTTTCTTTTACGCCTTGATGATTTGTGGGAGAGCATCTCCAACAAGTTCCTGCTGGTGATTGTTG CATGGTACCAAACCAGACTCCATGAGTGAAACCCTGGCAAACAGTGCTGGTGCTTCACCTGACTCCAAAC AGCGCATCACTTCAGAAAACGATGTCAGATCAAACTCAGATATACCAAAGAAATCAGAAACACTCTCCAT GTTGAGTGGAAGTGAAAAGAGCCTACATTCTGGCGGTGGCAGTGTAGGGGGGCAGTCTAACCACCATCTA CAGCTCCAGCATCTCTTGATGCCCCCTGGAGCAACCCAGACCCTGTCTGCTCAACAGATGCAGAGTTTAT TACAGGGTCAGGTCCTTAGCCAACATCAGTTGCAGCAACTGGTCTTACAACAACAGTCCTTCTTGCAGCA ACAGCAGTTACAGGAGCAGGCTACATTACTTCAACAGATGCAGGCAGCTGCTGTTGCTGCAGCCAGCGGT GATGCTGGTAAAGCCCAAGCCAAACTCTCACCACACCAGCAACAACTTCACAGCCTAGCCTTGCAACAAG CCCATATGATCCAGCTACAAGCCCAGCAACAAGCTGTTGCCTCGGGACAAATGATGCTACCACCAAGGTT GCAACAAGCCATGTCGGTGTCAGAGCTGCAGTCTTTGTGGAAGGAAGTCTCCTCACCAGAAGATGTCAAG AGCGCCCCCACAAGCTCTGTAGCATCCATGTTACCTGGATTGAGTGGACATCATCGTCATATGATGAATG GTCTCTTAGATGGATCTCACATACATCCAGGATTTCTGCTGGCACACCAAGGCATGATGATGCCCCATGA GGACCGATTGGCTAATCCTAACAACCACCCCCTCTATGCCCACGGTATGTGCAAGTGGCCTGGCTGTGAG ACGGTGTGTGAGGACTTCCCAGCATTCCTCAAGCACCTGAGCACGGAGCATGCCCTCGATGACCGTAGCA CAGCGCAAGCCAGGGTTCAGATGCAGGTCGTGAATCAGCTTGAGATACAGCTGACTAAGGAGAGGGAGAG GTTAGCTGCTATGATGGCCCATCTACATATGAAGCCTCCTATCGACTCCAAGCAAGAAACACCTAAGTCG TCTGTACAGTCATCTCCTTCATTGTCCAAGCCTGTGTCGGTGGTCCAGCACACGGCTCCCTCACTACCCA TGGTGCCCTCCAGTACACCTCCTGTGCCCATCACCTCCATCGCCTCTGCCCCCTACCATGTCTCCCTTGC TAGTGGTACCCCTAAGATCCCACCCCTCATCCCAGTCTCTACTCAAGCTGCTGTCCAGTCTCTTATGAGC CAGGCCCTGCGTAGTCCCCTTCATATCAAACAACAACAGCAACAGTTCCAGTTACATCCTGCTAACAACC AATCACACAAGCTTACTTCACATCATGTGACACCTGGTGGTCCAATCAGGAGGCGGAACAGTGAGAAGTA TGGCTTGTCACTTAGTACAGCAGAAATTCATCACAACTCAGACTTCTACAAAAATACTGATGTGAGGCCG CCATTTACGTATGCTGCCCTCATCAGGCAAGGCATTATCGATGCACCTGACCGACAATTAACGCTGAATG AGATCTATAATTGGTTCACAAGAACATTTGCATACTTCAGAAGAAATGCTGCCACATGGAAGAATGCTGT ACGGCACAACCTCAGTCTTCACAAGTGTTTTGTACGAGTTGAGAATGTGAAGGGTGCAGTATGGACGGTA GATGAGATTGAATTCATGAAGAGAAGACCTCAGAGAATGGGAAGTCTGAACACACCTCCGTCGACACCCA ACACACCCACCACACCCATCAGCAAGTCAGTTGATATGCTACCCACGGAGGATATGCCACTCAATCTAGA AACACACATGCATCCCATGGGTGGGAGTTTGCCGTTGTTAAGCGATGCAGCAGCAGCAGCTGCAGATCAT GCAATCCAAGTGTTGGACAACGAAGAAGATGACCTTGATGGAGACGAGTATCCTGGAGATCCCAGAGGTC GTTACCCTGGTGACGAGCGTGATACCTATCCTGAAGAAGAAAGGGAGCGATACTTGTTAGAGGTAGAAGA TAGAGGAGAGTATCCTGGTGGAGAGCGGGGTGGTGGTGACCCCTTCCCTGATGATGATAGAGACTCGTAC CCTCAGTGTGGAAGTGCGCCCCACCCTGACACCTGTAGGGATGTATACCCTCCTGGCAGAGAACGATCCC CAGGGGATGCAGTGAGCGAGGGGGAGCTGCACTACCGGGTGGAGCAACGGGAGCGATTCGCCAGTGAGGA AAGCGAGCGCTTCATGGCCGAAGAGCGGTTTAGGAGGGCTGCAGAGGAAGATCGATATGCAAGAGAAGGA GAGGAAGAAGCTGCAGCTCTTGAGAGGGAAGAGAGAGAGACTTATCCTCGGGGATTGAGGGAGGAGGAGG AGGAGGAAGAGGATATTGGTGAAGTAGAGGAGAGAGTGAGGAATGCAGCTATTGGTGATGAGCTGGTAGA AGAGGATGATGAGATGGAGGATGAAAGAGACCCACGTGAGGAAGCAAATCATGCTATTGCAGATCTCATT GAACACCAGAGTGCAGCAAACCGTCGCAAGGTTGGGCAGCTAACGATGGAGCAATTGAAACGTATGATGC ATCACAACCCTATGATGATGATTCCAGTACCAACCAATGGGCAATCAGAACATCACCCAGAACCATCCCT AGAGGGACCCAGCCAGGGGGTCATGTAAGGAAGGATGGGTCCCATCAGAACATCACCCAGAACCATCCCT AGAGGGACCCAGCCAGGGGGTTATGTAACGACTCATCATTCACTCTACTTCAGTTTGCCTTCGCTCGCTT CTTTTAGTTTCACTGACCTACTTGTACATGGATCTTGGGAATCTTTGGGAATCCTATCTAGGGAGACACC AAGGTGGTGGAAATACCTGGAAAATGAAATGAAAAAATATTGAAATTCAAAATATCTCAAGTAGGAAGTA GTTCTTCATCCATTGGTGATTCTACTGAATGTTATACATGTTGCTCTGTTGAATACCTTACTAGCCATAA GTTTTGCAAGGGTTTTATTTTCACTAAATTTTAGGGTCGCAGAATTAACAACTCTTTGAAATGACCGACA ATGCATTTGTGAGCATGTATAACAAGTAGCCAGTGTTATTACAAAGATATTACCTCTGCCTGGGTGTCCC TGTGATTGTCTCAAATATTGGCTTATAGTAATACAGTTAACTTTGCCATGTAAGGATGTGCATCGTGGAA TGTGATGATGTACTCCGTTACTTTGAAATGGAATTGTTGTTCCTTCTTACGATTTGAGCAAGAACACTGG CAATTTCGGTGGCTGAAAGATAAGAAGCAACCTCATGTGTTCATACATATGGATGAAAATGTTGTAATCC TAGTCTTGAATGATCAAATGATATAATTTGATGTAGCATTAGAAGCTCTCAGAGGGTATGTGGTTTTAAT TAGTCATGTACATACATACATGTAGATCAAGTTGCAAGGGAAGAAAAGATGATGTCTTTGATGTACACAA AGCATAGCAAACATAAACATTTTTATTATTTGTTATTGATTTATTTTTATTTTTTATAATGACATTTAAT GTTTGTAAAATGAAATATGCAGATTACATGGTGGTTATTCTGTAGAGTGATATGAAATGAGTTTCCTCTC CTCTCAAGTCTCGTTCAGATATGTTGTGGTAATCAACAGCATTTTTGATATGATGGCGTAAGTGTATATA CGCCTTCCATTTCTGTAACATTTCTTAAAACACAGAGCTAAGTGGATATAAGCCTGTAATTCACAGTTAC CACTCATTTACACATCTAAAAAGAAACCACTGTGTTTTACCGCTGCATATTTGAAGGAACCTGTATAATC CCTTTAGGCTGTTACAATGTGGTAAGGGAGTGTGAATGAACTTGCCAAAGTACATTGAATGTCTCCAGTT TATTTATTCTTAATATGACAATCCATCCACTGTGGAGTGGCTAGTAAAGGCAATGTTGACACCAGCAATT TAATCAAGACCTAGGAGTACATCTTTAATTTTTCCATTGATGGAAAATGCTCCTAATTGAACTTCAGTTG TATTAGTTTTTTCAAAACCTTTATAATCCTTTTCAAAACCAATAAGGAAACGTCTTTATAGTATAGACAT GATTCGTACGTAACGTAGGCATGCCTGTTATGCCGTCACTCCACAGGAAATGATAAGTACTATATGTAAA CTATCAGTCAATCATATGATTAATTATGGTAGGTAAGAGTCCAGTTTGAAAGAGAAGAGTACATCTTTGA GTACTGGCTTTATGGAAAGCCTGGCAGATGATCAGAATTGTAATTAATGTGTTATATATGGAGTGCTGAG AAGTGGCAACACTCAAGCTCAATCAAGATACTTTTACTATTTATTTCACGTATTTGATGAAATGCTGTTG TATATTTTTTTTTCTCTGTTTAGAACTGCCAATCATGTGTTTGATACCCATCATTGATATCATCCTTCAA ACTCATGTACATTTATGCGTATGTATAGCATGAGATCCTCTCTCTGCAAACAGAGAGTGAGTCTTCTGCG TACCTATTGATTAGTTTTTATTTTATCACCAGTGTCACAAATTAGAAATGTGTCATTTTAATGTAAAGTC TGATTAAGTAGACTACTAACTTTTCTTCTACTTCTTTTTTTTAAATGGGATGCAAATACCATTCCAGCCT TGCATACGATATATATGCAAATATGTAATCAATACAATATTAGAAAAAGATAATATAACTTCCAATACTG TACAGTCACTATTTCAAGATTGTGTGGAAAGTTCTAAATCAAGATTTGTCACATTTTACTGAAAGAAATA CCTAGATGTTATGTAGCTATTATCTTTGTTAGTAAAAAAAAAAAAAAGAAGCTAATCCTGATTCCTGAAG CATGATATCAAAAGTGGTTCATAATATATAATATGTAATTGTATTCCTGAAAATATGACCGCAGTTTTTC AAAAATCTCATTTAGAGCAACTCATGTGTGTCTTATCTTGCCCCCTGAAGGCTGACATTGCCCCGTTATT GGAAGAAGTGCATCTAGTATAAATCATGTTTGGCCCCAAAATATAATGCTCTCATAACCCATCCCACATG TTTTACATGAATGATGGCTCATATAGAGACCCCAGTATGGATTGCTCCCTCTAAGTTGTCAATGTCCTAT ATTGACATTTTCATGTCGATGTCTCACATTATTTTGCATGTTAGTTCATGTGTATATGTTTTCTCTCTGT CATGTCAATCAAAATGTCACCCGAGGAAGGCCACATTTATAGTTCCAGGAAACATCAATATAGGGTATTT TTAACGAGGTAGGATTGTGATCAACTATTAATTGCCCAGGAACATTTTCCAATGAGTGCTATAAAACTTC ACTGTTGAGTCATTTGCTATCCAGTTATTTTGCGGCATGACTCTTTTGCAAATCTGCAAACTTGAAGCAC TCACAAAATTTGTGATCATTTGATGCTTGAGATTATGTTTGGTTTTATATAGGTGTAGACATGAGATGAT TGTGAAGACATTAGAACTGCCATCAAGAACACAAAGTGTGAAGAAGGCTTTCAGATGTGTACTTTGTTTA AATATGCAGAATACTCTTTATCAGCTAGTTTCTTTTCAGTAGTGTGTTGAATATAAACCTGATGCTTTCC AGTTTCATCTTATAGGGTTGTAAATGAATCAAATAGTGGTATGTGATGATGACATAAAGAATGCTGCGTT GTGTGTAATATGATTTTAGTTTATTGATTACATGAGATGATTTGTATTGTATTGTTGGAGATGGCTTCCA GCATTATTTCTTTTTTCTTCTAAGATTTTTTCAAATTTCCTTTGAATTGCTTTCAAAGAGAAAATGGGAA GACAGAAAGAGAAGTAAATTGCATTTAGTTGATAGATCAGGTGGATTATGCTGTCAATAAGGCAGAAAAA CACCCAAGGAGAAGTGTCGTCAAATTGTGAGATTTATTTTTATTTGACAATTCATATACAACCAAAAAGA TTATGAAGAATGATGAATTAGAATATAGATTATTATGTAGATATTATATTTTTGTATTCCCTGCACTTGT TTAAGCATCTTCATTGAAAGAACTACTCCAACAAACTTGAGAATCATACAGGTTTGCACAATTTATTTTC CAAGAGAGAGGGAGACATAGAAATGACACCAGAACGAAAGAGGGTTTGTATAAGAGGATATTTGGTACAT TGATATTAAACTTGTCCTTTGTCCTCCCTCTAACAAAGATAAATGGGGTCACGCTGATGATATGGCCATG ATGTGTTACATCTAGTTTACAGGTTTATGTAGGTTTGATAAACCAAACCTCATCCTGCTCATCTCAATAT TAACCATGGTTACAGCTTAATACTACAGACTTTATTCTCATGATTTTTATCAAGTGTCAAATCTGCAGGT TTGTTTTAATGTAGTGAATAATTCATGTCTAAATATTTTACACTGCTACATGATTTGTAGACCAGTTATG CTGCACAATTATGATGTTTGTAATCCCGTTGTGAACATAAGTAGTATGTAGATCTTGCCAAAGTCCTTTA TCTCTCCTCGTTTAAATGTGAGTTTTTAATCTATTTTCCATACTGGAAGTTGTATAATTACTAAATTTGT TTCTCTCCACATGGTAGTTACTCCTCCACTTGTGTAAATGTTTCTTTGACTTGAAATGAAAGGAGCTGAT ATGCAAAACATTGAAAAACATTCAAAGCATATGCAATTTAAATTGCAGGGGAGGGGGGGGGGGTATTTGT GAAATGTTATGAAATGGCCTTGTTCTCAAATAATGTTATCATCATGAAAGAAACATATGTTAGATTGCTT AATCCTGTTATGGTAGATAGAAATGCCATATATATATGTATATATACAGCATGGGGTCCATTGTGGGTCT ATAGAAACAGTGTAGGTAGTAGTTTATTCCAAGTAAATGTACACCTTAATTGTTTGTTTTGCCTTGACAT GTAAAATATACCAAGATAATAATTTAAGGATGCTAGAGTTCCATTATTGTATAGGAATACAATACACATT TTGTGATTATTTGCCCATCTCACTCGCAATGTTATTACCATTTGTTGTTTAATGAATGTGTAAATGTGAC CTACCGGTAACTGTTCAAAATCACCAATAAGTTGCTAATCTGATGTCATTAAATAGATTAGCATTATGTT ACTGATTGCCCTCAGTGTAACATTTGTATTGCGTCAAAATGTTTGGAGCCAGAAGGGCATTAACTGCTTC AACACAGAGTTAAGACCATTCTGGCTCTGAGCGGACGATTGGTTCTTAGTCTCCAATCTCCCTATTGTAC TCACATGTATATACTACGCTGTGTTTCAGCTTGGTATAAGATGGTTTGAAGAAAGGAAACTGGACTGAAG TCTAAGTTTACCCATTGCTAAACATGTCTTCTCATCAGGTTTAAGTGAATGCTAAAATATGGGCCTAAGT ATTTTATGCCATTTTAATGATTATTATTTATTAGTTTTAAAAAGACAATCACTCATAAGAAGTGGATTTT GATAACTTATTGGTAATTTTGAGAAGACAGTCACACATATCCTACAGAGTTTAGTTTGACTCACTAAATG AATTGCCCAAATGATGAATTTTGTGCAGGTGATTGTTTGTAATCGTATTCTTTTCTGTTAAATTGTACTA ATTTCAATTGTTTCTGTCTTAGAACCTTTTTTGTTATTCCCTTACACTGTCTTAGTCCAGGTACCTTTTT AAATATTAATATGATTGAACTCCCATATTTTCACTGTATCCCTCTGTTTTTCTCTCATTTTCTTTTATCT TTAATGAAATCATTTCAATATAAACCTGCCATGTTTTCCTTATGTATATTTTTAAATTACTAACCTGAAA GAAACAAGGAAACTTGTTTTCTGTGATTAGAACTAACCTAACTTATGTCCATTCCATTATTGTGCAATTG TGTGGCATGTTAAGTGTATTGACTAACCTACATGCTCAGCATGCAGATATGTGCTTTCGGACAGGAAGCT ATATTTGGAATCTTTTGTATCTATGTAGAACCCCCATAGTTTGGTCCTGGTCTATGTCATTCCAGTTCTA TTTATGAATATTGTACTCTTTGCAATGTACATCAAAAGTGAATCAATCTTTCGTTGAATATACATGTATT ATGTAAGAATAGATAGAGTGATGTCATTTGTGTATATTTTTCCTTTTTTGTTTGTTTTTTGTATAATATG TTGAAGATACCAAAGAGAGCCCTTACTGTAAAAGTTTTTAAATTGTGATTTTGAGATTTTCTTTCAAAGA AGACAAACAAAAACACATAAACAGAGCCTATCCCCTGATGGAAATACATTGGGCCTTGAGAGAGATTTGT AAATGCTTCCAAAATGCCTTCTAATATTAGCACTAAAGAAGTAAATTCTTAATTTAAGAATCACCCTTTC TGTGAGCATTTCTATTAACGGGGAGAACAAATCCCATGTGTTTATACAAAAGCTGTATATATGCCGATCA GTGAGAAAATCAAACATAAATATAAGAATTGCACTGTGACCAATGATTAAAGAATCATCTTAATTATTGC ACACAAATGTGGTCTTATTTTAAGCTTTTTCTTATGTCTCAATTTACTTTTCTTTGTACAAATATTTAGT AAAAAAGGCCAGGTTTATAGTGCAGTAGCAGTCTTAAAATACATTGATAATCATTAGCTAACTTCTGTTG TATTGCTTGTTTTTGTGGTTGCAAAAATTAGTAATTTTGTGAGAAATTGTATGCTAGTCAATCTACTTGG ATAAATCTTTTATAGAAAGAACCCAATTATTACATGGTAATGATTTTTTAACTTTCCTGATATGCATGTA ATGTATGAATTGACATAGCAAGACAATGCTGCATGTTAAGAGTTTCTATCCAAGTTAAACTTATCATATG ATGTGCATTTCAGGTGCTAAATGTATATGATTCAAACTAGCATGCTCAAATTAGAATACATGTTGATATA TATCATAACGTTCTTGCATTTGTTGCAGGTTTGTTGAAATGTATACAAATTTCTACCTAATGTCATGCCA ACCTGGGGAAAAAATTGGTGTGTACCAAAGTATCACATGTTAATTGAGCAACACCAAATGATATACAACC TGCAGTAGATTGTACAAAGCTTTCAAGAAAAAATGCTCTTCTTCGTTGATGAAAATCTTTAGGACAAATT TTCATTCTACTTTGTTGCGTAGTGTAAAAACAAAAGCCTTCCAAAGAGTAGATGTTTAGTGTTGAGAATG ATTTTACACATACAAATAATTTATAGTGATGGCCGACGAGATATTTAAAAAAGCTGTGAATAGAGGAGAT GGGTTTGGGCATGAAAGTGTGGATCACAGATATTATGTCCTTATTGTACCTGATCCTCCTCGTATTAATG TCAAGTTGGTTACACCTGATTTCTTATAAAAAAAAGAAATGATTGAATCATGAGAAA
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds