Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.searchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_001198755.4 PREDICTED: Strongylocentrotus purpuratus glucose-6-phosphate isomerase (LOC762939), mRNA CGCCGCGCTCGTAAGGAAGTATTTATTGTTTTATTTGCACGTAGACCCGGTCAGCTCCCGTTTCGGTTGA AATACTTCCGCCTATTTGTCTGTGATTTCTGCTAAATTTCCATCATGGCTGCTACATTTTTGACTGAAGA TCCAGCATACAAAGAACTCAAGGCATGCTATGACCGAGTTGGAAGCAAATTGAACCTTAATCAGCTGATG AAATCCGATCCAAAACGGTTTGAAAAATACAGCCGCACTATTCCGACTCCAGATGGAGACTTTCTCCTAG ATTTCTCCAAGAATCTTGTGGATGATGAAGTCTTTGGTCTCCTGCTCAAACTGGCTAAAGCTCGAGACCT GGAGGGAGCTCGAGATCGTATGTTTGGAGGAGAGAAGATCAACTTTACGGAGGACCGGGCTGTGCTCCAT GTTGCCCTACGTAACCGTTCTAACACCCCTATCCTGGTCAATGGCAAGGACGTCATGACAGATGTCAATG AGGTCCTTGGTCGTGTCAGGAAATTTACAGAGTCTGTTCGTAGCGGTGAATGGAAAGGATTCTCAGGCAA GGCAATCACTGATGCTGTCAACATTGGTATCGGAGGATCAGATCTTGGTCCAGTGATGGTGACAGAAGCC CTGAAACCATTTGGAGGACCGCTCAAGGTTCACTTTGTCTCAAACATCGATGGAACTCATCTTGCTGAGG TCTTGAAGAAGGTTAACCCTGAGACAACCCTCTTTATTGTAGCATCAAAGACGTTCACCACCCAGGAGAC GATCACCAACGCTACCTCAGCTAAGAACTGGTTCCTGGAGACGGCCAAGGACCCTGCCCATGTTGCCAAG CACTTTGTCGCCCTCTCCACCAATGCCGAGAAGGTTTCAGCCTTTGGTATTGACAAGAACAACATGTTTG GATTCTGGGATTGGGTTGGTGGACGCTATTCTCTCTGGTCCGCCATCGGCACGTCTATCGCCCTCTATGT TGGCATGGATAACTTTGAGAAGCTCCTAGAAGGGGCTCATTTTGCTGACAATCATTTCCGTACTGCTCCC CTGGACAAGAATCTCCCAGTCATCATGGGCATGCTAGGAGTCTGGTATTCTAACTTCTTTGGAGCGGAGA CTCATGCCCTACTCCCGTATGATCAGTACTTACATCGCTTTGCAGCCTACTTCCAGCAAGGCGACATGGA ATCTAACGGGAAATATGTGACCCGTGATGGTCGCCGTGTAGCCTATTCTACCGGTCCTATCGTCTGGGGA GAACCAGGAACTAATGGGCAACATGCTTTCTATCAACTCATTCATCAAGGTACTCGCATTATCCCAGCTG ATTTCATAGCTCCTGTAGAGACTCATAACCCTGTCCAGGGAGGTTTGCATCATGAGATCCTAATGGCAAA CTTCTTAGCCCAGACTGAGGCTCTGATGACAGGCAAGACTAAAGCGGAAGCAGAGAAAGAGCTGGTGGCT TCTGGGATGTCCGCTGAAAATATTAAACTCATTCTGCCCCACAAGGTATTTGAAGGCAACCGTCCAACCA ACTCCATCATGTTCCAGAAGCTAACACCGTTTACACTCGGCGTACTGCTTGCTACGTATGAACACAAGAT CTTCACTCAAGGAATCATATGGAATATCAACTCATATGACCAGTGGGGTGTTGAGCTCGGTAAGCAGCTG GCTAAGATCATCCAACCAGAGCTCAAGGACGCCAACCCAGTTTCCTCCCATGACTCCTCAACCAACGGCC TTATCAACTTCATCAAGACTCACAGGAAGTAAGCAAGAGAGGATCAGAGGTCAGAGGTCAATGACCTTTC AGTAGTACTTACTGAGTGCAATGTGCTCCGATAGATAGAATGACTATCAGTAATAATAGAATCAGTAACT TGGTGAAAGTTTCTTTAGTAAGGTTTACTAACATGTACATGTATCACTGCTAACATACCTAAGCTTCGTT CAGATATGATGAGGTATACGTTTTATTAAAAAATGATGACGTAAGTGTAATACCCTTCATGTCTCTGTAT CTTATAACACAGCGCTCAATGAATCCATGTAGGACCTTTGTAGCTTGCAGTTGCTATTCATTAACATATT TTAAAAAAATCACAACTCGGTCAACTGCTTTTTTGCGTTGGTTTACCGTACCATATCTGAACAAGCTGTG AGAGTATTTAGAGGACATACATTAAGTTTGATGTACCTCTTCTGCTGTAGGTCATATTCAAATTTGAATG CCTAAGTAAAGAATTTTCCAGCTTTTATTTCATACATGAAGATTATAAATTGTATATTATCACTACATAG ATAATATCTACTTATTATGAGTAACCCAGGAATATATTTCACTTTTCACCTGTTAAGCAATAGAATACAG TGTACATGTATATGTTTATGAATGGTTATGGTATGTAGAACATACATGTATGTTAGTCCCAAGTTACCTT GAAATACATACATATTATCATGATACATCCAATCCATGTGTTAGAATTGTTGATTTGAAATATAAAAGAA ATTTTTAATCATAGAAATGATTCTGTGTTTCAGAATGAAAGAAATATCATAGTGGCTGAACTTTATTAAC TGAATTGCCGGGTAGAAAAATGCAAAACTGCCAAATATTTTCTTGGTTTTCAGAAACCTGCCGAGCAATC TCAACTCCCAACTTTAATGTGAATTAGATTCACCCCTCAAGAAACTCAAAGGTAATATATATGCAATTCC AATGACCTTGAGAATAAATTACTTATTAAACTTTTGTGAGTTGTTAATTCTGTGTAAAAGCTTGAATTTG TGTAGTTAATTTTATGATATATTGTCTCACAATTATCAAAAGAAAATCAGTACTTCCTACTTTTTTGTTT ATCTCTTTATAAAAGAGAATATTTGCTAGTTGTTTTTGTAGAAAATACCAAAGTGGTATACAGAGAGAAA GAGATATATTTATGTTCAGTTGTTTTAAAAATAATTTGTTATTGAAGATGTATTTTTTTGGTGTATGTTT AGGGGTTCCAATATATATAGATCTATGATTTATTTATGGAGCGTATTAATTGTGTATATTCCACACTGGA TGTGTAACTGTTACTTATTCAAATAATCACATTTTGCTGTAGGATTTTGTTTAGTTATCTTCAGCAAGAT CTGAGTTATGTATCAATAGATGTCTGAACCTTGGTACAAAATGAGGTTCAGTCAATCATAATCATTCATA CAATACGATAGGTGCTAGTTGTTGTTTGAATCATGTTAACAAGTTTATTACAAGCAAAGTCTATATTTGC CATCAATGATTAATACATACATTGTTTTGAAGATTGATTGGCTGACATTAGTAAACAAGTAATTAGGGTT TGGGCTTCTCTTGAACATTATTTTGTTTTTAGCTCCGTCAAAGTGGACATAAAAAGTTTTTGAAAGTATG GTATGTAAATAACACATGGCATAGAAGAAAGCATGCAACTGATGCAAGGTTTACATTGCTTTTCCAGTGA TTATTGTTTCCTTGACAAAAAAGATCAATGTTTTGCTTTGATAGATAGGAGAATGTTAATGCTATGCTTC CCTTTGGTGTCTATCTGAATAATTAAATAAAGTGATGAAATAATGATGTAACACTTGAAATTGAAGTATA TATTTTCAATTTATTGATAAACTCAGAACATCTGGCAATACATTTGCTTGTTACCATACCATCATCGATA CAACCATGCCTATGCATGGTATATATGCATACCCTCAATCACAGAGGAGATGATAAAAAAGTATGTTAAA TATTTTAATGGCTTAATCATGTTTAGGACCTTAACATTAGTTTCACCTTGGTAGCCATAATAAAGAAAAT GAAAGCTTATATTCAGAGATGTTTGTTTGTTTTACCTGACTGCTAAGAAAGCACGAGTATGGTTGTAAGT AAGCAACCAGGGACAGAAGGCTTTAAGTCATCTGCCAGGGACTTGGTAATGGGGATTAATGCCCTACCAA AGGGCACTAGCGTATTGAACTTGGTTTCTATGTGTGTATAATTACAATATAACTCTGTACTTATAAAAGA TCTATAAAATATATGTTTTGCACCTTAACCTCTTCAATAAAACTAAACATAGTTTTCAATGGA
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds