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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>JT116650.1 TSA: Strongylocentrotus purpuratus WHL22.738029.0 mRNA sequence TCTACATCTCCATCGCCCTCTGCTGCATCCCCCCAACCTCTGGGGTCCTCTACCCCTGCGAGGGAGTCGC CCCATCCAAGAGGATCACCCCATCTAGGAGTACCTGACTCATCCCTTCTCAACACCACCGTGATCATCGA CAGGGGACCAGCAACACCAGCTCAGCCAATCAACAACCAGGAATCGTCCCTTCTCAACACGCCCATTGTC ATTGACAAGACGCATCAGTCGATATCTAACATGGATTCAACTCTCCAGGGTGATTCGACCTTTGACCAGA CGTTGACGCCAGCCGTCACGCTGGCAGACTCTTCCCTGCTGAACACTTCCATTGCATGTGGCGTGCCATC ATCGTCGATGACCAGGCATCAAACAACCATTCTCCACATCTCACCCCCGGAGATCTCAGCATTGTTGGAC ATCTCCATGCCAGCATCAGAGAATGGGGATACCATCTCAATCTCAATGGATTCTTCCACATTTAGGACAT TTGGACAGGACATCTCATCTATCAGTCCCAACTCGACTACCAATGAGCTTCTAAACAGTAGCACCCTATC AAGAGACATTGGTAACGTCAGCCCAACATCTTCACCCTTCAAGATCAACTCATTAGGTCCTGAAGCACAG TGGTTTAATGGAGAGAGCTTAGACATCTCAATGTCAAGTCTTCTTGGGCACCTGGAGTCTCCCGAGAAGA AGGAGAGGAATCACCCCTCTACATCTACCGCTGTCTCTGTGGCTTCTACTCTATCCCTCCCTCCTGGTCT CCTCTCAGAGTCATCCAGAGACTCCATCATGGCACGAGAGGTTGACTCTACTCTGCAGGTTATGTTGAAT GAGAACAGCATTGACTATGTGGCTAAGTTTGCTGACCTAGCTGCCCACATCTCTGCGACCCCTGACACAC CTCACAAGATCAACATCATTGACAAGGCCTTTGCGGAAGATAACACACCAGTGGAATCTGGTGGTCCTCA GCTACAGCTATCATCTTCTACTTAGGGTCCAAGCTTCATGAACGTTACTCCCAAGATCTTTGCTGTCTGA GATATGTCCAACAAGATTGATATCATTGATAAGGCCTTTGCGAAAGCTAACACACCAATAGAATCTGGTG GTCCTCAGCTACAGCTATCATCTTCTACGTAGTGTTCAAGCTTGATGGACGTTACTCCTACATCTCTGCG ACCCCTGACACGCCTCACAAGATCAACATCATTGACAAGGCCTTTGCGAAAGATAACGCACCAATTGAAT CTGGTGGTCCTCAGCTACAGCTATCATCTTCTATGAAGAGTTCAAGCTTCATGGACGTTCCTCCAAAATC TGTGCTGTCTGAAACATGTCCTTTGCAGTAGAGGATACCCATTCCAAACATGGTTTCTGATGAACCCTGG TAGTCCTCATCTAGAGCTTTCATCCTCTACATAGGGTTCAAGTTAGTTGGATGGCCTCTGCCAACCTTGG CATGCCCCACAAGATCAGCATCCTTGATGAGGCCTTTGCAGCAGAGGATAGCACACAAGCAGAACCTGGC AAACTTCACTGATCTGCTACATCAATGTGTAGCATGTTTGATAGCCTTCTGCATCTCTGCTACCCTGCAT GCCCCACAAGATCAGCATCCTTGATGAGGCCTTTGCAGTAGAGGATAGCACACCGACAGAACCTGGTGGA CTGTAGTGACAGCTCTCATCTGCTACGTAGATCCCAAGGGTGTTGGATGGCCTTCCACATCTCTGCCACA CCCTCAACAGGCTGTGCACGATCAATACTGCTTAAGCTCTCATCTCCTGCGTAGTGTACTACCTTGTTTG TTGATTCCATGCATCTCTCCCACCCCAGACAAGATCAAAAGCATTGTCAAGTGTCAACTCCTTTGTACAT ACCTAATGGTCAATTCATCTTAAATATGTCATAGAGATAAATGAGCTTCAGTTAGTTTGTAATAATGCTA GTCTTTCTTCACTTCCTTCTATCTCCATCACATCTTTATCAAGTTGGAGTCCTATTTTTGTACTAGAAAG AAAAGGTATTTGGAATGTCTAACAGTATTAGAGGAGTGTATTAGAAAATGAACAATTGCGATAGCTATGT GTCGGTTACTTCTAGTCTTTCATCTTTCAGCTCTGTCACTGTTTGTCGTATCGTCTATAGGAAGAGGCTG GTTAGTTAGAATGAACGTTGTTTTCCATGAAATGTAAGGTAAAAGTGTACTTGAACTAAATTAGAACAAA CTTTCTTCATGATTAAGTCATTTGTATAATGCTTCTCTAAAGTGCATGATACATTGATTATATGTTTACT TGATATTCGTTAATCAAAACAGCAGAAATATACATAGCCAAAATATGTCATAATGAGATGACATTTATCT GAACACCTACAAATTTGATTTCATTTGTCTTACTAATGATAGCTTCTTCTTCTCCTCTACAACAGCTCCT CTTTCTCTCTTTTCTTCCTTGATTTCATTTCATCAAACCAAAGAAAATACAAAATTTTGCTAATATCTTC TATTCTATTTCTATACCTCTTTGAGGACTTTTTTGTTGCTGTCATTTCATGAACTCAATATTATCTTTAA AATGTTTAATCGCGCCACTGGCAGTATTATGTGCATAGGATATTTATTAAACAAATTTTATTTGCGTTTA TTGGAGTACAGTATAATGTTAAATGTCATTACTTATAGATGCATGTATCTGCCTGGTGGAAAAGATTGGC GATCTCACGATTAATGAAGGCATCAAATTTCAAAAGTAAAATTGTTTTAAATTTACAGATGAGAGATAAC AATTTAGTAAACTTGAAGAAATTCTCTTCATCATATTTTAAGGACTTCTAGTCCCCCCTTCCCACCTTTT TTGGGCATTTTGAAAATCTCTTGTTGCTTGATAGTTAATATTGGTTAATATCTACATGATTCTTCCTCCT TTTTTTTTTCCTTCAAAGTTCCTGACAAGTTTTGGATACTATATTTTTGTCTGATGACATCATTGTACAC TTACTTGTAAGTTAAAGACTTAACTTGATGTGTTTATTGTATTTAATGTTACTTCAAATTGTTGTGATTT TTTGTGGTTAATTGTGCAATATCCTGAGTTGCAAATGTGTTGTGGCCAAGAAAAACATCAATACTTGGTC ATTTAAGCATCTCCGTTTTATTTGGAGAAGATTAACATCTTTATGCTGCAGTTTGGATCTTTAATTATTT TTAAAACCACATGATATCATTGGTTCAGTACATGGTTTGCAAAAGCAGAGATGAGTTGTGTATTTGGGTT TCTGTTGCATTGATGTATGTGGGATCTTCAGAGTTGTATTGGTTGGATTATGAAGAGAACTGCTTGTTTA AAATGACATTGCAAATCAAGTAGTAAGAAGATAGCTTTTCATATGGTTGCTAGCATTATCTTGTATGAGC TAATACCAGATACATGTATGCATTCTTTGACAATTTGCAATGATTGTCAACTCCCACCTATCCTTACTAT GTCCTGGATGTTTGATTACCGCATCTTAAACACTGCCATATACAATGTAGTTCAGGGATCATATTTTGAA AAGCATGTGTCGAAACAAACTGAAAATACACATGTACTGCAATTTTTGTTTGTATGTAAGTCTGTACTTT ATAATCTTGTTTAGAGAAATAGTTGGCTGAATGCATATTCCTCCCATACATGTTGGGGCGCAAACCTTAC ACATATAAAACATGTAAATGTAATTGCAAATTAAAATGTGGATACGGTAAGCTGTTTGCTTGAATTAGCC TTCACAGTTTGCTCTAAACACTTAACAACTCGCAAGGTGGTGTAAGTTGGTTTGTCTGGACAAGCTTACA TGGAGGAAACGTTTCTTTCTGAAAAATCAGATTGATAAGATATCTATCTCGTGAAGCTGCATTGTATTAT AAGAATTTTTTGTTGTTTAAATACTCTTAATGTGACAAAATGTAGATCATATTCAAACAGCATATTGCGG ATGGAAAGTGTATAATTCTGAACGAATGATAGAAGGAAGAAAGATATCTAGATGACCCATTTGCTTTTGC CCATATGATTATGGCTATTCACTGCCTTCAGCTCAATTATACATGCAGAAACATGAAATAGTAGTAGTCT ACGACTTAGTTGATTTTGCACAACTCATCTACACATATATAAACGCTGTCATATTTATATTTGCCAGTTG AAATTGTTAATTCGCTGCATCTACTTTCTTCAATACTCGTTTTATTATGAAATAGACCGTTTGTCATATG ATTCTTTGCCAATGAAATTATTTATTCATCTTGATTCTTAAACTTTGATACCATCTTCCTAGGCCATGTG AAAGTTATTTCTTGCGTTTTGTCCAAATTTGAAGCTGAAATTGGTTAGAGGGGGTTTGACAAGTGATATT TTTCTCTACTGCAATACAAATGCCATGGGTTTGTTCCTGACACAACTACTAAATTTTTGTTTTCTATTTG TCCATATACTACAGTGGTTTGAACTACATGTAGGTTGAACATTATCTAGTTGCCCTGGGGGGTGTTTCAC AAAGATCTTAAGTTGAATTTATCTCTAAGTTGGACTTAAAAATTATGGAAAGCCATTAGCATCCTTGAAA ATATTTTGTAAAATTTATTTTAAAAGGCCTAAAATGTTGATTCAAACCATTCATATTTTCTATTATCATG GGAGATTTCATGTTCTTGATGTGGAAATTATGAAAAGTCTATAATACTCTAATTTTTGCTTTTGAATATA TTTTATTTTAAGGCTACAAATGGCTCTCCATAATGTTTAAGTCTAACTTAGAGTTAAGTTCGACTTCAAA TCTTTGTGAAACACCCCCCTGTTCTTACAGATTTTTTATTTTTCACATTTAACAAGATAACAGGGAAATA GCTGAAAGAGAAAGTGAGTAGAAATGAAAACCAAAGATTTAATTTCACATGGCCTTATAAACAGCTTTGT GTATCTGGATTTGATGTGTTCATTTGGGGAGAAAAAAAAGTTTTATGTGGTTCTGTGACTGACAATGACT AAAATAAGATGTTTAGATCAATAAGAAAAGCATAAACATGATTCTACATCTTGGCCCCATCTTATACAGT GTTGATTTTAATCGCAACTATGTACATAAGAGATATGAGACTGCAAACTTGCGATTGATTGGAGGACTTA TGATTGATTTGGATCGATCGTAACTATTATAAGACGGGGCCCAGATGTGTACCAGTAGATTTCAGTCACT TTGTTGAATCCAAACCCATGTGAATTGACATTAAATCGACTTGCCCCACTCAGTAATGGTGCTGTGTATA ACAGAAGGTTTATTTCCACTGTTGCACCCTACCATTTAGCATGTACTAACAAGTGGATATTTTCATTGCC AGAAGATGTCTGCCAGGAAAAAGACATCAATGTGAATAATCTTAAGTCACTCCAGCAGTGATGTATAAAT GCTGTATTCCAGTTGCAAAAATATATATTTTTTGCTTATTTATACATGTATTATTTGTTAGTAATAATTA TTGCTGAGTAATGTTATGTGCTTATAATGCCCAAGGTGAAAGAGCATTAATTGACATAAAACATATTTTC TTTTGGTATACATGTATATATGAACATTTGTTATAAATTAAACAAAAGAATGTTTTATCTCAAAG
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???blast.matrix???
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???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds