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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_038201948.1 PREDICTED: Patiria miniata E3 ubiquitin-protein ligase SH3RF1-like (LOC119729324), mRNA ATTATTTTGCAAGACACAAAAGTACTCCGCATTTAATTTCAAAGAAGTGTATTATCACTTTTCTCATTTG ATCTATTCAAATATCCTCAAGTGGTGGATTTTATTCATGAAAAAGTGTACATCAAAAGAAATACGAAACG ATTTGGATAAATATTGTAATTTGGAGGACTACGTTTTTTGGTGAAAGCACCGAATACGTCGGATGTGATG CGGTCAACAAGCAAGATGGCGGCCATGAGGTTTGGGTCGACTGTGAAACCTCAGCCGCTGATAATGTGTA AATTTCATATTACTTTGTATTCTTCGTCAAAGTTCGAATAGATTGAGTTTTTTTTTAAATTTGAAGCCGA CACCTGGCAGCCCCCATGGATGAGCAGACCATCTTCAATCTCCTGGAGTGCTCGGTCTGCCTGGAGCCTC TGGATGTTACCAGCCGGGTCCTGCCCTGCCAGCACACCTTCTGCATGCGCTGCCTGCAGCAGATCATCAA CACCCGCAACGAGCTCAAGTGCCCAGAATGCAGGGAGCTGGTACCCTGTCGGCTGGTGACCGATCTACCT ACTAATATACTGCTGGTGCGGCTGCTGGACGGGCTGAAGAGGCCGGGCAAAGCGCCCCCTGGGTCACCTC CACCAAGAACCAGTAATGCCGGAATCTCGGGCTCCGGGGAGACGACGGTCAGCGGGAGAAGTGCCTCCTC AAAGACTTCCATACAGAACCAACCATGTGCAATGGCCCTGTACAAGTACGACGCTCAAGAACATGGCGAT CTCTCCTTCAACAAGTCGGACATCATCCTGTTGCATAAAAAGATTGATGAGAATTGGTACCAGGGAGTGG TGATGGGTACCAGTGATCAGATCGGTTTCTTCCCGGCCAGCTACGTGCAGGTACTCACCCCTCTGCCACC AGACCCGCCCCAGTGCAAGGCATTGTACGACTTCGAAGTCAACGAACAGGAGGAGAAAGATTGCCTAACT TTCAATAAGGATGAGGTTCTGAACGTGATCAGGCGTGTTGATGAGAACTGGGTGGAAGGAAAGAAGGGAG ACAAGATCGGCATCTTCCCTCTATCGTTCGTTGAGCTGAATGGTACAGCCAAGGCTTTAGTGGATGCACA CGCCGGTATTGACATTAGCTCTGGACCGTCCCATCAGTCCCAAGGTAGCGGGGATGCAGGCAGCAACCCT GATCAGACGGGATCCGGTCAGGAGGGCGGCAGTAAAAACAAAGCCAAGCGTCACTCGTTCACCTCCCTCC TCGGCCTGAGCGTGTCAGCCCAGAGCAAGAACAAGGACTCCCAGCCCAGCACTAACGCTAGCGCCAGCAC CAGCACCAGCAATGCAGCAAGCAGCAGCAACAGCGGCGGCAGCAGCAGCAACAGGCATTCCATGGAGATC AGCTCCCCTGTCCTGGTACGTTCCAGCAATCCCACGGCGGCCAATCTCATCGACAACAAGGCAGCGACGA CATCACAGCAGGCTGCGGCAGGTACTGCAGCTGCAGCAACAACATCGACTGGTGCTACTGCGACAGCTGC AGATGCATCATCATCATCAACGACGTCTGCTGCAAGGAAGAAGCCAGCTCCCCTGACTGGTATTTCACAG ATTCCCGCCAGCAGCACTCGAGGGCCCAACTCCCCCAGCGTGGCTGCTTCCCCGACTGTCACCCAGGCTG GCAATGCAGATTTCAGATTCGTGGCAGAGGCACCAGCCTCGCCCAAGCCAAAAGTAGAAGTTTACGTGGC CATGTATTCCTACAAGTCCACCAAGCCCGATGAGCTGGAGCTTAAGAAAGGCGATTTTTACACCGTGACG GAGAAATGTAAAGATGGCTGGTTCAAGGGCATGGCTGTCAAGACTGGTGACTTGGGCGTCTTTCCTGGAA ACTACATGCAGGCTTACAGGCATGATAGATCAACCAGGAAAGTCACCACCACTGCACCTGACACCAGGAC CTCGCAATCCACGTCCACTGCTACCTCATCACCCAGCCAGGGCTTTAGACCACGCCTCCCTAGCGACGCA GCATCTCGGGCTGCCTCCACCAACCAGAGAGCAATGCCCACGGAGGCTCCCGGTAGCCCCTCCCCAATCC AGGGGATGAGACCAAGGGTCTTGAGCGACGCTGCCTCACGGATGTCAGCCCAACGTGCTTCCGCAGCTGC AGCAGCTGCAACAACTGATGCCTCGACGACATCACCACCTGTTGGCCTGAGCTCTGCCACAACTCAAACA ACCGGCACCCGGCCCGCCGCCAATGCCTCTCGACCTGTGGGCCAGTCTTCTCAACCAACCTCCCCTGCTC CGATGCAGCAGGAGGGTAGGCCCATGGCACAAATTCCCGATGGACAGAAAACTGTCGCTCAGCTGCAGAG TGAGCGCGCTGCCCAGAAGCTGCAGTTCAGACCGCCCCCGCCAAACTACCCAGCGCGCTCAAGTCTTTCA ACTGTGGCGCAGGGTAGGGCAACTGCTGCTCATTCTGAGAGGAACCTTAGAGGAAGTCCCCCTACTGTGG GGACGCAAACTGCTGCCATGTTGGCAAGAACTAGTGTCAGTCCTGCTGGGGTCCAACAACCCCAATCCCC AGGGGTGCAAACCAGACATGTAGGGGTGTCAAGCGCACCCATCAGTGTCAGACCTAGGGCATCCTCTGGA CAAGCTGCGGTGGGATCTCCACCCACGCATAATGGAATACTCCAGCGAGTACGCAGTCCTAGCTCACCTC AGCCGGGGTTGCAGGATGGTACCACAACAAACGATATGGGGAATGCAGTCACAAAGCCCAGGGGATCCCC CATCCTGGGTCAGGGGTCACCTAAGGGAGCAAGTGTGAGCGGTTGTGCCAACCAGCCCCAGTCCACGCCT CCACAGGTAGAGGTCCATTTAAGCAGTTCAACAAGTGCCAAAGCTAAACGTCACTCCGCACAAATCCCGG CTGCAGCAGCTGAGGCCCAAGCCAGGCAGCAAGCACTGAAGCCACGCCGTCACAGCGAGAGCGACAACGA TTCGGTGCGATCACGCAGGACAGTGCAAGCCAAAGCTACCACCACCCAGCAACACCCACCACAAAGCAAT GCCCAAATGCACCCTGTTGCTTCATGCTCTGCTCAGACCAGCAAGAATAATCTTGCTGCTGCCACTACCG TATCAACCTCACAGCCCCATCCCAGCAAACAAACTGTTGTAGTGTCTTCCGCCTCTAGTCAGTCACATAG CAAGCCCAGTAGTCCTAGTCTGTACAGGGTATCCGATAATTTGCCATTCACGCCCCCACCAAATGTCACT GCACCTGATTGTGTTGTTGCGTCTTCCCTTGCCGGTCCTACTAAGATGGACAAGAAGGACAGGAAGGATC GCAAAGCCTCCAAGAAGCGATCCCAGGTGAGTCCGGACGAAGCAGCACCAGTACCCTTGGCTCGCCTCAG CTCCCTACCTGACGGGCAGGACCCCTTGTCCACTGACGCTTCTCCTCAGCCCCGCCCCAGCCCGAGTCTC CCTCTATCTGCCACTCCGTCTGCTGTACAGGGAGAAGGGAGTGGGGAGGAGACCTCACTAGGAGCAGAGG GGGTCAGCGATGGTGCTAGTGCCGTGGAGAGGAGGGACAAGCCACCCAAGACAACTCCACTTGTCCGAGA AAGGTACCGAGTGACGGTTCCCTACCCGCCACACAGCGATGCCGAGCTGGAGCTGAAAGTGGGCGAGACG GTCTTCGTACACAGCAAACGGGAGGATGGATGGTTCAAAGGCACCCAGCAGAGGACGGGGAAAACAGGTC TATTCCCTGGAAGCTTTGTGGAGAGCTACTAACTAAGGATGTGTCCAAGTTGGGTACTTTTGTGGATCTC AGCCTTATGTGTTGCCATAAGAGGAGAATGAAAAATTAAACAGGCAGTAACTTGAGCTTTAGCTCAAGGT TTTACGAGGTACTACGAGTTACCTTGGGGTGCCTCTGGGTTCAACCTCAATTTACCACTAGGTACCTTGA GGTACCTCTGGGTTCAACTTCAAGTTACAATTAAGAACCTCAAGGTGCCTCTGGGTTCAACCTCAAATTA CCACAAGGTACCTCGAGGTACCTCAGGGTTCAACCTCAAGTTACCACTAGGTACCTTGAGGTACCTCTGG GTTCAGCCTCAAATTTACCATTCGTCCCTAACTCTGGTGGACAGTCACTCTGCAAAGCAAATTTTAACCA AATCCTGCAGTGTTTTCATGTGGTAGCTAAATACATTACTGAACATGTTTGGCTAAAATACACTCTGGAA CATGTTTTAATAACAACATATCTATAGATTTCAATGTGATGTAATCATCAGTAAGCAGAACACATGTGTT TAAGTGATTGCAGTATCAATAATGATCTGGCAGCCATATTAGCAGCACTAGTAACACAAAAAGCCTGTGC CTTCACCCTCTTTTGTGAAATGTAGTCTAGTCGCTTAATATTCAATGGAAATGACATGGCCCATGTGCTT ATTTCAGAAGAAAAAGTTAACGTACTTAGAGCATGTGAACAGTAAGTGGTTCAGCCTAAACCATTGAAGG TGGTTCTTGTTATTGAATTATCATCATTACAGATGCCTTCATCCAATAAGTGTTTGCCTTTTGCTACGTA TTAAGTAAAATGTTGCCATGTGTTTACGGCTGTGTCTGAATCAGTTCTTGTTAGTAATGGCTTTCTTTCT TGCTACTTACACACTACTGACACTAGTCATAGCCATAGACAGAAGTAACGGATTCTGAATAGGTGGCAGA TACTGCAAAATGTTCAAAAACAAAAACAAAACAGAATTTCAAGGTTAACATAACTTATAGGTTTTTTTTC CAGAGATACCTGCTATTATTCTCAGTTTTAAGCGTCAATATGTAACTTAGTGCTGCAGTTCAGTGCCTCA ATATTTTCAGGATTACAAGTTTTTACGTTGAGAATTTTTGAGCAAATAAGCTGTTATCCTGTGTTTGAAT CTATTCCTGATAAATGGATACTGTTCTAACTTATATGCTCTGCCCATTCATTGTTCACAAATAACGAATT TGAATTTTCTTGTGTACTATGGTGTTTCAACAAATGTGTGGTTGGAATTCCACACAAAGCCAAAATTTAG TTTTGTATGTATACCCTGTAAAAAATGAAATTGGTGGTGGGAAAAAAAAGGACCCAACGAGCATCCATTG AAAGGAAACGATGAATATCATGTAGTTGAAAAGCAAATCTTTAACATAGATATATTAGCAGAATTTTGTA ACGCCAGCTATATATTTTTAACAGCTGGTTATTGTTAACAAATAACAGTATTATTGTTGTTAATAAAATA TATCAATATTTGGTTGAAATTGCTGCATGCAGTATGTTCACCTATAGTTGTTTTTTTTGTAGTTCCTGAT TGTAAAGAAAACTATTAATTGGCAAAGAAATTTCCGATATTTGAAAGTAGTATTTATCCAAATCAAATGA AATTTGACCTGATAATTAACAAGTTATAGTAGAAGTCTAATTCACACATTTTAACTGCCTGACAAACCAG AATAAAGCACAAAATAACTTTAAAACAAAATTACCTTTTGTTTTTTGGTATTTTCAATTAGTTTTTGAGG TCTAAAAGAAACTTGATTACTTTCTAATCGGCCTAATGTTGAAGTCGATTTTGCAACTGAACGTGAATTT ACTTGACCAAACCTTTTGAAAAAAAATGTCTTTCAGTTAGGTCACATTTTCCTCAGGCATTTGGTGATAT ATGCACATGAAAAAAAAATGCATTACAAGTGTCAAACATATCCCCAACACATTATTCTTTTGTAAAGCGG TTTGGATAATACAGCCTAAATGTAAAAACAAAATGATTTGCTCGGCTATTTTTGTACCTGTACCTGCTTA AAAAAAAAAACAATATTAAAATGTACTCTGTTTACAGAGGCTGAGATATTTATAAAGTAACACTACTTTC AGCCAATTTTGCTCAACTGCTGTTAATCTAGTCGCTAAAGGAAATAGCTTCCTTACTGATTCTGTAGTAG ATATTTTTCTTTGAATTCAAGATGTAGGTTTTCATAATGCTACATGGACACAGAAAGTTTGTTTATTTAC ACAAGTGCATTTGAGGTTCATTCTTAAAACATTGTGAATTGGCCTCACATCAGAAACTGTTTTGTTTGCT ACAAAACAACAGTATGTGTCTTTGCCGCGAAAAAGTGTCGCTAACAATAAAGATATATGTAACACAGATG ATTATTTTTTAAGTGATTAGAATGTACATGTACATAGTATAACAAATTGAAGTTAATAATGAATCCAGAA TGCAGTAGAATGTGGAATAATCAGTACTTGTCTGTACCAATTTTGTTTTTCAATAAGTCTGGGAACCATT CCTGAAAAGCTGTGTCCCATAGTCTGTCACCCCATTGAACTCAATGACCTGCAATTTTCTTATTCCAAGC TAACAATATAGCTGACTGATTGTCCTACTTAAATTATTTTAATGTCTTGGATTAATTTGCATAATGCACA CTTTTATGGAAAAAAAATTGCTGATTAATTCTAATACCCAAAATAAATTGTACTATTGTACCAATTGTGA TAATGTTTGATAGTACTTCTGCTAAAGCCATGTCACCAAATGCTCATTGTGACTATTTTTTTTAAGCCAA CTGCCACCAAAAAAAACAGGGTAGAGATTCAGAAAATTCAGGTTTGCTTGACCGGTTCGTTTTTAAGTAC TGCATCTGTATTCGTGCAAGAATATATGTTCAGTAATTGCCACTTTTGTATTCAGTTCACTTTGTGTTAA CTCTTTATTAATAAAAAAATGTACTTGCATTATGATCCGAAGTTAGGTACATAAATGTCAATAAATATTA ACCCTGAAACTGAAAGATA
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???blast.matrix???
???blast.matrix.blosum62???
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???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds