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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_011672779.2 PREDICTED: Strongylocentrotus purpuratus E3 ubiquitin-protein ligase SH3RF1 (LOC589164), transcript variant X5, mRNA AAAATTTTAGAGATACCGTAATAGTAATGGACGCTGCGACACACAGACCACAGAGCAGCGACACATGAAA AACGTAGCTGAACCACATCTTTCTGTCCTGATTCAAGTTTCTATGGAATTATGTAGTGTACTATAGATGA TAAACGATGGAAGACTCGTGACATCACATTCACAGAGACAATGCTATCGTGGATGAAACTAAAGTGATGG GGCTCGAAATAGCCTAAATGAATGGAATGGATGAACAATCGATATTTGACATCCTCGAGTGCTCTGTATG CCTGGAGCGGTTAGATGCGACCAGTCGCGTCTTGCCGTGTCAGCACACCTTCTGCCAGCGATGTCTTCAG CAGATCCTCAATACCCGGGGCGAGCTGCGCTGCCCAGAGTGCCGGGACCTTGCCCCGCATCAGAAGGTAA CAGACCTGCCCACCAACATTCTCCTTGTGAGGCTGTTGGATGGCATGAAGCGGCCGGCTCCACCGTCGCC CAAGACTGGAGCTTCGACGACGGGCAGTTCTGGAGGAAGCGTGGGAAAGAGCAACGGACAGGCTGAGTCT ACTTCCGCCAGTAGGAGTGGTGTTTCCAAGATTCCTGGTCCTAATCAACCATGTGCTAAAACCCTGTACA ACTACGATGGGCAGGAATCTGGCGATTTGTCTTTCAATAAAGGTGCTATCGTACTCCTTCTCAAGAGGAT CGATGATAACTGGTATCACGGTGAACTAGACGGTAGCCGCGGCTTCTTTCCCGCAAGCTACGTTGAGGTG TTAACGCCTCTCCCGCCCGATCCGCCACAGTGTAAAGCCCTCTATGACTTTGATGTGAACGAACAGGAGG AGAAGGACTGTTTGACCTTCAATAAGGATGAAGTGCTGATGGTGATAAGAAGAGTGGATGATAATTGGAT AGAGGGGCAGAGAGGTGATAAGATTGGAATATTCCCCATCTCATTTGTGGAGTTGAACGATACAGCCAAG GGTCTGGTGGTTGTGAATGAAGGAGCTACAGGAGGAGATGGATCAGGTCATGAGTCTGGTTCCAGTAGCA AGAACAAATCATCGAACAAGCGTCATTCTTTCACTTCCATGCTTGGTGTCCAACTGCGCTCCAAGGACTC CCAAGATCGAGGGAGTGGCGGCACCAGTGGTGGTGGGGGGAGTGGAGGAGGTAATGGTACCAGTCCTAAT AACCGTCACTCCATGGAGATCTCATCTCCTGTCCTCCTGAGGTCTAGTAATCCCACCGCTGCCACCCTTA TAGAGGCTAAGGCAGCAGCAGCAGTAGCAGCAGCGGTAGCAACAGGTGGCCCTTCACCCGCATCATCTCC ATCCCCATCATCATCTCCGCTTCCCGTTGCCACGGCATCAGGGAGCAGCACTCAGACTGCTTCTGGAGGA AGCAGAAAGAAGCCAGCTCCACTTACGCTGATCAATCAGCCTGCTGCTGGTGGACTACCACCCAACTCTC CTACCATGTTTGCATCAGGTGGACCAGCCACGCCCACTCATCTTGCAGCCCAGGATCCACCATCCTCTCC TAAACCAAAAGTGGAAGTGTATGTAGCCATGTTCAACTACAAGCCCCTGAACCCTGATGAGATTGAGTTG CGGAAAGGCGAGTGTTACACGGTGACAGAAAAATGCAAGGATGGGTGGTTTAAGGGTTTATCCGTTTCAA GCGGCCAGATCGGTGTTTTTCCTGGCAACTACATGCAAGTGTACAGGCATGATAGACAAGAGAAGCAGAA GAAGGCTGCTGCATCATCATCAGCCTCTTCATCATCAACTTCATCATCATCGACCTTTGCCAGCTCATCT CTCTCCACACCATCATCAGCGTCAGCCCCGCGATCAGCCACAGCATCATCTCATACAACAGCACCCAACT CTGGAGTTGCCGGACAAAGTGCTAGCTCCGGGGCAGGAGAGAAGAAAGCGCATCACCATGATGGACAAAA GACTGTAGCACAGCTGCAGGGTGAACGGGCAGCACTGAGGATGCATTATCAGGGTGCAACTCAAGGGGCT GTTAGTAGGCCTATCCAGGCTCCTCCTCAGACAAGACTGAATGAAAGACACCCTCAAGGTAGCCCACCCA CCGTGGGTGTGGAGACAGCTAGGCAGGGCGGGGTAGTAGGATCTCCTGCTATGGCAGGCAGCTGGCCAGG GAATGCCCCGCCCACTGGGGCCAGTGTAGGAAACAGGCAGGTTCACACTGCAGTTCAAACTACAAACGCT AATGCGCAGACTGTGCGTCCTAGGACAGTCAATCCCACCGCTGCCACCAGCACGTCTTACCCCAATGCAT CTCAACCAGGTTCACCACCGGTCTCACACGGAATCAGAACTCATGGAGGAGTTCCTCCTGGTGCCACCGG GCTTGCAGATACCAGCAATGTACAGCCTGGTGTCCCTGTCAGACAAGCATGTAGCCAGATGGTGTTCCCT CACCAGAAGGAGAAGAAGGAGAGGAAAAGCAAGAAGCCTTCCAACAAGCATGTTACATCCAACGAAGCTC CAGAGTTAGGAGGCACTCGAACCACCAGCCCTTCGCGCTCCGCCATCCGAACAACCACCTCCGCTACCCA GTCACCTAACTCCTCCAAGTCATCCTCCCCGGAGAATCAGCAGGGGGAGGCTCCAGCGGCAGAGACTCCT GCAGGAGCTGTGACAGGGGGAGGGGAAGGAGCCAGGGGCGGGACTGAGACAGGTGCTGCTGCTGCGGAAC AAACCCCACCGAAAACAACTCCATTGCTGCGTGAAAGATATCGTGTGATTGTCCCATACCCACCGACGAC AGACGCTGAGCTTGAGCTCAAGATTGGAGACTCTGTCTTTGTTCACAAGAAGCGAGATGACGGCTGGTTC AAAGGAACATTGCTCCGAACGGGCAAAACGGGACTCTTTCCTGGTAGTTTCGCTGAACCCTACTAAGCCT CGACCCTGATGCATACTTTTTTTACTGTGCAGATGACACTTTCTGTGGAGTCTTGATGTGATTTGATGCC TGTATGAACAAGTGTCATGGAATTTGTGAAACCTTTCAGATAATGTGCATGCCGATATTTGAATGCTGAA CTGAATATTCTGTGAGGAAGGAACATGTAATATAATTCAATTCTCTGCTTGGTTGACAGTTGTTAAGTAA TGCAGTGATGGTAAAAACAGATTTCCTTCTTTTTCAGAACTCTGGTTCTACCCATGTTAATTAATCTCAA AATAAAATTATTAAATAATTGGGAATTGAGAAGATGAGAACAAAAATGCAAGAGGGGGGGGGGGGGGCGT TGGGGATCTGTCGGTTGAACATAACTTTCAAGGTTATTTGAAGAATGATAATCATCTTGGTTGTGTTTTA CCCCCTTCAAGATTCGCCAACAGAATCATTTATCGAATGGACCTTAACCAACACTGTGTTTTACCTCTGT AGGTAGTCCAGCTTGCATGGCGTCCGAGTGTCATACACTGGTTTGTGACAGGTTTCTCAATAATGATGAC AACCTCTGTTGGAAACATTAATTTATACTGTAATAATAAGAGACATACACTCTAATTCACATAAATCAAT GTTTGTAAAAACCGAAAATTATTTTGATAGCAGAAAATCTCAGTTCTGCCCCATTATTGCATATATCAAT AGTAGGGTGGATTCACAATTGATAGTGCCCCCACAGGCAAGCCGCGACAGCCCAATTTTTCAGTTCGCAA TCAGTGCAGTACAGCCAAAAAAAATTCCCTGGATCTCCTAGGGTATATAATATTGTCACAGCTGATATTT TTGTCAACTATTTCCCATAATGCATCGAGTGAAATTGACTAAATTTTGGTATCTCTAGATGGCGCTGTAG ATTGTGAATCCACCATATTTTATATAATAAAGTGTGGAGATAAGTTTTGTGAAGGGGAAACTTCACAATT TAAATGGTACAGAATTAATTCAATTTTATTTCTTTGGATACTAAAGTGAGTTGTTGATTGATGATATGCA AAAGATTGTGCCTGATAGTAGTAGACCAAAGATCATGGGTTTAGATGAAAGTGAACGTCATTTAGCTATG TAAGTACACACACTGCATGCAAGCTAAAGCAAAACATATATTAAAGACTTGTCACAACTATTAATATATT GCTATTTCAGAAGATGACAATTGTGAGCTCGAAAAGGATCTTTTTTTCTCAACATAATGCAGGAATGGGC AGTAGAGCATAAGTACAAAGCAGACATTTTATGGAAATATGAAAAGTATACTATTTAAATGTTTGATGTT GTTGATTGTTTTACTTGACTGATAAGAAAGCGTGTTTATGCTTGTATTAGTAAGCTATCAGGGGACAGAC GACTTTAAGTCCTCTCAAAGGGACTTGTGATGAGAATTGATGCTCTACCAAAGGGCATAAGCATATTGAC TTGGTTTTGAACCCAGGATCTCCAGGTTATGAGACCACTGCTTTACAACTGAGCCATGGCAAATCTAACA GAAACTGAAGAGAATGACAGAGAATAGTTAGCTCTTGGGATGAAATTGATATATAAGGACAGTTTGAGCA ACAGGAAGGTTTGGGTAACAATGGCCCAATAATTCAACAGCAGGCAAAACATATATCAGTTATAGAAAAT GAAGGCACATAAGTGATGTCATCAAAGCTTATCTTGCTCTAAATAGCTGATGTAGTATTGTGTTAATATG GTAGCATGTCAGTAATACCTTATGCAATGCTACAGTAGCTAAATGTTCTGTGAAACCTTTCTTCCCAGTA TGCATGAAGATTTGTCTACAAGTCTCCATGTAGGCTTGGTACATTTCACATCTGAAAGCCCTTAAATGAT TAAGCAATTTATGAGGTAAAACAAAGCAAACTTTAAAAAGTATATGATTGTTTAATTTACTTTACCCCAC AGGTAAATAATCATGTCATGATGTCAAATTTGTTTAAAAAACCATGGTTTATGATGTTAAACGTGCATGA CTTTAAGTATAATATACATCTCTGTGTAACTTGACTGCATACTAATTATGATTACTTGGTAGGCAGTAAA TATAGGGCTTGTTAAATATAGACCTTGCCACTCAAAATCAGAACTTAAATGAGAAGTTGTTATAATGCTT GTGCTTTCTTATTCCAATCATTGTTTTGAATTATATTATTTACGATAAGTACAGATTACTGTACGGTTCC ATGTCATTTGTTCCTAGGGGCAGTATTCTGAAAACCTTTAAACTGTGTCAAAACTATGTCAGATTACAAA GACCTCTGTATTATGCTAAAAAATTAGAGCTGCATTACACGGCTAAATCATTTTGATAAGTGAAATTAGT TGCATTTTAGCAGCATGAGCAATCGTGTAAAGATGCATCTCCACAAAAATCTGTTGGATACGTTTGTGAA CTTTGTGTAGTTCAGAGATCAATGTGTTGATTTCTTATTTTGTCTGTTTGGCGCCAGAAGGCCAGTAGCT CATATAATTTTATCACACAGAGATAAAGCCCTTTAGGCTCCAAACAGACAGTATACAATGTTATTATGGT TTTCAGATTACTATCTCAAAATTGCTTTTCACAGAAGACTTGCATAATATACTCCAATGTTCAATTTCTG TTCAATTTTTTATATATTTATGGTTATCACTGATACCAAAGAATCATTATTTAACCAGTGATATGTTTGT CATCTGTACCATGTCTCTAGCATTCAAGTATGGTCTGTACTTTTGAATAAGACTTCACATCATTACATTG AATTAATTCAGAAGTATTTGCATGAATGCTACCCTCCTAACTCTGTCAATGTAACAGTAATATTTTTTCG ATGCCAACGAATGCTGTATAAGTATGAAGTTATTGTTGTCCATTAGTATACCAATTAAGGAGGCTATATA GTATATGGTGTTAGAGCAGTGTCATGATCGCACCACCTCAGTTTTATTTCGAAGAGGCACCAATATGATC AAACTGGAGGATCGGTATTCACATATAGGTATTAACTTTAATTCGGTTTGAACCCAGTGGGTGCTTCATA AATAAATGGACTAAGTTACAGTAAACCAGCTTTTACCTAGCCGCATTCGTGACTAGATGTAATTAATGAA AGTAGTTTGTTTAAAAAAGAGAATTC
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???blast.gapedalgin???
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Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds