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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>JT100883.1 TSA: Strongylocentrotus purpuratus WHL22.90786.0 mRNA sequence CTTCAGGTCCTGATGCGCTCCATCGTGAACCTTGACATCCAGGATGCCAACGGACGTACGGCCCTTGACC TGGCAGCCTTCAAGGGTCATGCAGAGTGTGTAGAGTCGTTGGTCATGCAGGCGGCTACCATCCTAGTACA CGATTCGGTCTCCAAGAGGACACCCATGCATGCTGCAGCCTACAACGGCCATGCGGAGTGTCTTCGGATA TTACTGGAGAATGCTGAGCAGGAAGGAGCCGTCGACATCGTGGACGACCAGGGTAGGACGCCTCTCATGG TTGCCGTTAGCAACGGTCACATCGATGCCACCATGCTGCTCCTGGATCACAGGGCTAGCCCAACCATCCA AGACGTCAATAAGAGGACAGCGTTACATAGAGCGGCCGCTAACGGACACGAGGAATGCTGTGATGCACTC TTAGGGGTGTGTAACTCCACCATCCGGGATATCAATGGCCGATCGGCTCTTCACATGGCTGCAGCGTGTG GCCACGAGGGTATCTTGGGTTCTCTCTTGCAGCTTGAACCCACGAACCACTTAGACAACAAGGGCTACAC ACCACTGCACTGGGCTTGCTATAACGGGCACGATAATTGTGTTGAGCTGCTACTGGAGCAAGATGCAAAC ATGTTCTTTGAAGGGAATTCATTCTCCGCACTTCACTGTTCAGTATTACGAGACAATGAAGTATGTGCTG AGATGCTGATAGATGCCCTGGCTGATGAAGTTGTCAACATCCAAGATTCTAAAGGAAGGACGCCACTTCA TGCTGCTGCCCTCAACGACCAAGTGGAGTGCATGCAGCTCCTACTGAAGCATGGAGGCCAGCCCAACATT GTCGACAAGGGTGGCAAGACTTGCTTCATGATTGCTGCAGAGAGTGGTTCTGCCGGGACTATAGAATTAC TGGTAACGGGACAAATAGCTGACATCTCTTTATCAGATGAGACAGGGAACTCAGCTCTTCACCTGGCTTG CCAACAAACACACGAAGGATGCGCTTTGATGATCTTAGAAAAGATAGATGACGTCAGAGTCTTAGACATG CCAAACGCTAAAGGAGAAACCCCGTTGCATATAGCTTCCGCTCAAGGTCTAGTCACAGTGGTCCAGGACC TTATAACAAGAGGAGCCAGTCTTCTAACTGTAGACAATCAAGGTTACACACCCGCTCTAAGCTGCGCATC GTCTGACAAGGTGGCCGACTGCCTGGCTCTCATCCTAGCTCACATGATGCCCTTCTCCCCGGGGAACTCC ACCATCAATTCCTCTCGCATCGCCCTCGCGCTCTCCGGCGAGCTCGGCCGCACCCGAACGTCCACCAGCC TCGACTTCAACGACGGCAACCGCAGCAGGACGGAGAGCAATGCCGATACGTCTGACTCGGAGACCTATTG ACTACTGATGTAAATGTTGATGATGTTGTAGGTTCTACGACACATGCTCTGGCGACAATTGCTACGTGGT CCACATTTCTACTCTAAAATAAGCTCTAATTTCTACCTTAGACCAAACACTACCTAACATTAACCCTAAC CAAAAACCTAAATGGATATTTATACCCAAGTCACATTTCTTTTATGAAATAAATGCTTAAAACAATTGTT GCCAGAATAGATTTAGTGTCACTAATTATATCATGTATCTTTAAATATTTAACAATTTAATAATTTAATA TAAAATATCCATTCAGCTAATTTACTTTCTGAAAACCAAAAGAGGGTTTGCAAAGTTTTTTTGGTAGCTT TTGGACCTCTTTTGGTTACACTATATGAAAACCGATTGCAACCCGAACCCAAGTCATTTATGTTTGATGA AATAAAGCACAGAGCAATTGTCGCGAGAATTTTTTTTGTGTCACCATCTGATTTATATTTAAATGTTTTT CTAGATATCCATGTAGCTAACTTATTTTCTAAAAAAAATAAACAGAGAGTTGAAAATTTGGTTATTTGAA CTTTTAGGGGCTGCCTCTGAATCTGTTAGAAATTGTTGAACCTTTTTTTGCTTTATAATGAAGTAGACAT GATAATTAATATTTTAATGTATTGTAGCTTTAATTCTTTGAGTAAAAGAAAAGGATTATTTTGCAGCTGT TAAATACTTGATTTTTAGATTATAAAAATCACTCCTAAATTTGCAGGATGTGCTCATTTCATTTGGCAAT TAGCTTATCTTATCACACAGTATAGATAGAGAGATGAACTAAGGTGGAATGGCATGGTATAAGTGACCAA AGTTTAACAGTGAACAGAGGATCACATTTAATAGGGAGAAAGGAAATGATGAAGCAGGGGAACCCTTCTT CTTTCTAATTAGTACTATTATTTTGTGTGTTTGTATACCCCTTGTAGTTGAGTTGGTGAATAGTAATGAA CATTCCACATCTCCAGGGGAGTGTTTCACAAAGACTAAGAGCGACATAAGAAAAAAAAGTAAAGTTAAAT TCAAGACTTGGACTTATACTACGGTATGCGATTTATGCCCTTAAAAAGTCTTGAACCAGATGTAAAAGTA GAGAGGACAATTGTAACTTTAAAATTATAATCTTTAGATAATATCTCCCTTCAATAAAGAACTATCAAAA GGTGTAAATTCTGTAGATTTGTGACCAAGATTTGTACGTCCCTTGAGAAACCAATGCCAGGAATGGTAAC CGTTAAAGGAACTAGTGGCATGAATGGCCTGCTATAGGTCAAGTTCAACTTAAGTCGATCTTAGTCTTTG TGAAACACCCCCCAGATCTCATTCTGCAAGCAAAGCCCTGAATGAGCCAAACACACTCAGATGTAGACCA AGATATGATCCAAAGTACCTCATATATTCCTGTAGTGACTGACATTCCTAGACTTGTTTTTTTCATTGTT TTTCGCTCGTTTGTCATAGATTTAGGTACATACCGTGTAGATAGTACTTTTTACAATTGACCAAATATAT ATATATAGTTTGATAGATGTACATGTATGGTAATTTTTCGTTTACTCTAGATAGTTTAGAAAGACATTTT GAGAGCAAGCTTTAAAATATGTATGGGTGTCCTCAGTAAGTGTTCATGGGCTATTCAGCATAAATTATAA TAAACGAAATCTAATCAGCCCAACAAATTTGATGGGCCACAAATGAACACCTTGTAAAATCACCATTGTC CTTCATTTTCTGTCACACTTCTGGTCAAATCTTCTAGACCAGTCTTGAAAGTTTTCATTGTACCTTCACA GCTGCATAGGATAGACTCTTCACATTGAATGCTTTAGGTTACATGATTGCCACAAATCGTCCTTGTTTTC ACGAAGTGACGGTAGTGAGGAAAATCGTAACGCAAAGTGAACGCAATTTTTTTTCACTACCCTCACTTCG TGAAAACAGCGACGAAATGTATCCACAATTCGGATTCTTCGTTTCTAGATTTGATACTTTTTCAATTAAA TGTTGTGTAAATTGATTTTCTTCATAGCCTTTCTAATTTTATATCGCTTTCCATTATCGCTTTCAACTTA TTTACTCTAGCTTTCTTGTTTTTTTTAATTTGGGCTTTCTTTTTCTGGGAAATACTGTTCGTTGCCAGTC TGTCATAATAATAATAAAATAATAATAATACATATGATTTATAAGGCGCCAAATCCACTTGACAGTCAAA TGCTCAAGGCTTGAGCATAATATGGGATTGTGTATATCAGTGTTATAAATGTAGCTTAAAACAAAGAGCA CATATCATCCATGTGCTCTGCATGCACTGTATACACTTGCATTTCTATTACTTTATATGGGAAAATAATG TATCTACACTTGGGTTCTGTAATGGGTTCACAGACATATCTTCTACTATTTATATTTCATAAGATTGATC TTTTTAAACATTATTTGTATGTAAATAACATGAGAATAAGGAAAGGAACATGAATGCAACGATGTTGTAG TGTTTGCAGCATTTCCTAAAAGATATTTGCCCCAAAGTTATTATATTTTCTCTATATTCATATCAGTATT GCTTGCAGATTTAATTTTTGTGATATGTAAAGATAATTCATTATGTCTCTTTGGAGTTTAAAGAGTTCAG GTACATTTTGTTGGGAAAATTAGTTTTCTCTTCTGGGTATTTCAAAAGATCAGAGAACTGTCTTTTTTTG TTCACTGCGTTAACTGGGATATGAACCAGTATATATTACTATGCAGGCTAGAAACTATATATTTGAGTTG GTGCTTTGAAAGTTATTTGTATATATTATGAAACACTTAATATTCACCGGATGTATTCAAATTGCCGCTT AGATATTGTTTATATTCTTTTTTTTTTAGCATGTAAAATGTTATACAGTTTTTGTATTTTCAAATCTACG GTTTTGTTACGCTTACATTTTAGTGGATTTAGATATTTTCAATAGATCTTGTACAAATTGATTTCATATC TTGGCATATTTGTGATTATTGGTTGTTAATAACATATTGCTTTATTTTGAGAAGAAGGTATGCTAATGGG AAAAGTGAAGAGAGGCACTGGGTAACATCCTTAATACTTAGTTACGATTATTTTTAGAAAAATGTTAATG TCCTAAAAGAAATTTCAAACTTGAGATGGGATTAGGGTTTTTATAGAATCACCTCCCCCCTTGTTTTTAC ATGTTATGACATCATAAAAGGAAAAGCAGCCTCGGCGTAAAATATATCCATGGCAAGGGAAAGAAAAGTC TTTTATCTAGATATATTCCATTCCAAAGGAATAGACTGACACTTTTAAATAGATATTCAGATACCACTAT TGATATTATGCCAAAGCAATAATCTGGTCATTTATTTCTCCTTGAGTTTGAACGGGGCAACTTTGGAGTC CGTCTGTTTACCAAGGTGCTCTTGCATAAAGAGTTGCGTTTAAAGGCAACTCTGAAAATCAAACGCAAGT CCTAAAAAATCAACATAACATGTGGGTCCGATCGGCTCGCCTATCTAGCTGAGACGACGAGCCATGCTTA ATTAATGCAAAGTCATTGTGAATATGCGTACTCTACATAAGATGATATCATCAAGTTGATACCGGTAGCT AGTTATTAGGTTGACAACTTCCGTTTTTCAAAGCTTTAGATTTCAAGTTTCCAGGGAGCTGTTACTCCTG TAAAACTTCTGATAGGGTTTAAACTGTTTCCTTCACTTTGAAACAAGGTTTCTTCCAGGAAGGGCGATCT TGAATGTGTGCATGTGTACATTCACTCTGTTTCTGTACTAGAAGTGTTGCTATTGGTATTGTTTCTTGGT AAAGTAAGGACTAGGTGGGACTACACATTTAAGCTATAAACTAGAAGAGGTAGAAATTGACCGTGACATT AGTACACAGAATATCCCAACACCAAGACGAGGCAGTGGTATAGTGTTTTGAAGTATCAAACCAGAATCCT TGCTGTTCTTGCAGAATTCTTGTCATATGGTGGGCTTCATTGTCATCGGCTACCGTGAATAAGGCTGCTA CGACCATTAAAAAAATACTTATTCATGACATCATTTTTGTGGGCAGCCAATGATTTACATCTGTGATAAC CGTGTTTGTTTAGTTTCTACTTTCAATTCTATTAACTATTGTGTTTTGTTTATTGGCACAACAAAGATCA TGTACGGATGCTGTAACGATAGGCCGTGAAACCTGCATTTATGATAACCACCTGTACAGTAAGATCACCT GTCTATATAGACTATATTCTGATGAAATGTGTAGTTGAACCTGTGTTTAAGACCACTTTTCTTGTAGCCA TTGAGTGGTCTTTATATCGAGGTCTCATTTTAATGCATCAATACACCAAATTTATTCCATTTGACGGCAA CATCTTGATTTAAGTATTTTTCCAGTTTTCCCCTAGAGATTATTTCATCACGCTAATTTTGTTCCACCGA ATTGGTTATAAACAAGACCAAGTTTTTCCTCCCTCGATTGTGTTCGCCATGTACATGTATGTTGTACTTT TCTCTTATAGTAAATTTTGTTGCTAAACGCTCCCTTCTTTTTTAATTTGTTTTGAAATTGTACCTCTAAC AAACTATCATAGATTGTGTATAGTTTCCTATTTTTTTAGGAACCGGTGCATCAATGGAATGAACAAAAAT ATGTTTTGTGTTCTTGTAAATACAAATGTAATACTGTAAATGTTGTCAATATCTGATAACAGAGTTTGAA ATGGATTATTTGGATGAGGAATTTGACCAAATTTGCCAGGAAATGGCCTACTTTGTGTGGACTGTATATC ATGCTTATAAGATGGATTTAAAAACATGAAATAAAATACTGAAAGCATATGAACA
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???blast.numalign.1???
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???blast.numalign.50???
???blast.numalign.100???
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???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds