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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>JT097245.1 TSA: Strongylocentrotus purpuratus WHL22.726546.1 mRNA sequence AGACGACAGTGTGGGCTTTGTTATGTACGATCTTGTCAGAATCATAAACATCCTCATAACCTTCCGGCTC TTCAGGATAATTACACACTTCAAGACTATGGCCATTGTGGTCAGTACTATGCTAGATCTGATCAGGAACC TACGTGCTTTCATCGGGATCCTTGTCGTAATCTACTATGTATTTGCTATTTTGGGGATGGTCGTCTTTCG AGGGAAGAGTCCCCAGCCGCCCAATAATACTGACATAACTCAATTACCAATGTGTGGGTCTTATCAGCAG CTGAATTACTATGCAAATAATTTTGATGATTTTGCGTCTGCCATCGTTGTACTCTGGGATATCATGGTGG TGAATAATTGGCATGTCTTCCTGGAGGCATATTCAAAAACAGCTTCTCAATGGTCCCAAATCTATTTCAT TGCCTGGTACTTCACCTCAGTCTTGGTTTGCCTCAACGTATTCACTGCAATTATTCTGGAGAATTTCATC ACATCCTGGGACCGAAGTCAGAAGAGACAGCGGCAATCTTTGGAAGAGGGAAATAGACCGACCGCTTACC TTATGTCTGTCCATACAATGTTCAGGGACGATCTTCAGGAGCCGACCGAGAGCGAACTCCTGGATGAGAT TTACAAGCATCCCCACATACAAAACCTGCGCTTCTAAGACCATCTCTTGCCACCACTCTGTGAATTCCCT TGCCTACCCGACACTGCGTTTGATAATCATAAACAGCGTATTCTCTAACTGTCACAGAAAACTGGTTAAC CAAAGATATAAGAACTGCAGATGGAAGAAGCTAGAAGACTCGCCAATTGTTTTGGATGGTCAGACGATGC TAGAATCTAAAAAAGACAATAAAAAAAACATGCTCCTCGCTCATGTCCCACTACTTGTCCGGAGGTTCTG ATGATCGACAACTACTAGTACCAGACCCTAACAAGACATGGATGCGTAACAAGACGTGGAGAAATATTCA TGAAATTTGTTACAAAATGCATCATAGCTTGCATTTGTTCAGCAAGTGCCCCTATCATTTCGTAACAACC AAATGCTCCACATCCCTCCTGGGCATTGGTAGTCCATTTGCTACAGGCCATACATGCAAGTGACTTGACG TGGGTGTGAAATTGTAGACTAGTTGACACATGAATTAGAAATGAAAGCTCGGTGTCACACCATGCCTGTA GGTCCAAATGATGCCATCATTGGTTTAACTTGTCTCTGTATCAGTCCAACCTTCCAGAGACTCCCTCCCT GGGTAAAGAACGTCAAGGAACAATCACTGCCTTTATCTTGATCTTACTTGTACATATGCTGTTGACAGTT GGACATTTTATCATGGACATTTCAACCACTCTACCCGATCCCTTGCCCTAGGATAAGGAGCAATATTCGA ACAATCGGTGCCTTTCTTTGGACCTTCCATGTCCACATGATGATGCTGATAATGTTTGAAAACTCCTATC ATATAGTTTAACATTACACTGATTAATTGATTCTTCCCAAATCCCGTACCCCCGGGTAAGGAGTGGCATT GAACAAGAAATGCTTTACTAAGATATGCGCATAGATGTGCTGCTAGGTAGAACTCCCTCTCACAAACTAC AATTTGAAGGCCCAACCTTCGTTCTGTCCTTGATGCAATACGTCACCTGGGTAAGGAGCGGCATCGAACC AGAAATGCTTTACTGAGATATATGCATAGATGTGCTGCTAGGTAGGACTCCCTCTCACAGACTCACAGAC AACACCTCACAAGGGTCAGGAAGCAGCAGCAGGTCCTAGATTCAAACACCCATGACCAAACGCACAAATG AAGTCACTTGATTCAGAGTTTTGAGCACAGCCTTTATGCCTAACAGTCCAATTCTCTTCCCAGCAACGGC CAACCTTGCCACAGCCTTTCAAGGAAATCAGGAAAAAGGATGGAGTCGACAGTCATCTCAGGGAGATCTT GTCTTCCGTTGACAGATTCAGAAGGGGGTTTTAATCGCTCTGGGAGATCATGCATGAAGCTCAGAGGAGA TATGCTGCATTTCAGATTCCTTTGGCAAGAAATTATGAAGTATGGAATGGAACAAAGCGCCATGCATATC ACAGAATTTGTCTTCTGTCAACAGATAAATGCAATTCTATTCTGCATTTATATAGCGCTTCATACATCCA CGATGTCTCTAATTACTTTATAGAAATATTATTATCGTTGTCATAGGATTTAGGCTTGTCCACTCACAAT GTATACACATTCTCCACTCCCTGTGGAGCATTCTAGCCAGGTGCCATACACAGACTCAGGTGCAAAAGAC ATTTTGTCTTCGCAAGGAGACAGCTGAGGGGTAACAAGATGTGCTGAATTTCTTGATCCAATCTGCATCA GGTATCAAGGTTTCGAATGTCCAGAAGAACTAGATGAGACAGATGACGGCTTCCAACAAGCAAGGCTCAA GCAGGGAATACTGCATTTCAGATTCCTTGCGCAAGGCTGGCGGGACAAAACTTCAGGTGGGATTCAAACT TGTTTCATAGTTGAGTTTATTTGCATTTCTCTGAAGGAAATTCCACTTTAGAATTGTTTTATATGAATGC ACACTGTCAGCTGTTCAATAATTGAGTTTATTTTGATTTAAGAAAAATTTAAGAGAAAATTTCAGATTTG AATGATTTTGTTATTTTTGTTTGGAAGTTCATGGTAAGCCATTTCATAGTTGAGTTATTTTGATTACTTG GAAAAAACTTTCATTTCGGAAGTTGCTTTGTTTAAACTTTCATTGAATTTTTGTTTTCATTTCATATCTT TCAGCTTTCATTTGTTGACTAATAATGATTGGTGTTGAATTTTTTTTTTGTCATGCTTTAAAATTTGCTT TTTCAACATAAATTCAATATTTCCAGTTTACTGAATCAAATCTTGAAAGCATTGAAATTTCGAAGCAAGG GATGCTACGCAGCTACAGAAAAAGGAAAACGGTAGTAAAATAAAAAATTTCACTGTTGAATTTACCATTT TTGCTTGTATTACATATCGTCTGTTTGAATTCAAAAGGGCTTCAACTTGGATACTTTGGACAGAGTTAAT AATCTTATGGCTCCAAACAGTTGATATCATGAAATGTTGCTGGTTTTGTTTTAATGCTGCTGAATTCATT GAGTAATGTGACATTCAATATTTTGCCATTTTTTCAATTTCCGGACTGACTAAATCAGCCATAGTTTTCT TGCAAATATTCATTAAATGAACTGCCATTGATAACAGTCGAGTTTGATACTAACCCATTTTAGAGGTGTT GTGGTCCCGTGGACAATTCACCGGACTGTGAACCACAAGGTACAGAGTTCAAATCCCTGCCATAGCTCTG GCGTCCTTTGGCAAGACGTTAATCTACATTTGCCACACTTTACCCAGGTGAGGTAAATGGGTACCTGGTA GGATCATTCCTTGACATGCACTATGGGCTGATAACGGCTGCCTGACCTAAAGCTAGGGTAATACAGTGTA CTTTTCAAAGCTCTTTTGAAGCGCATTGGGACATTATAATGTGATATGTGCTATACACGAAAGGATTATT ATTATTATTTTATTCCAGTTGTGTCTAAAAAAAAAAAAGAACCAGAAACTGTTGTGTGCATGACAGTTTT ATGCTGTGTGATTGAATCACAATTGACCAAACTTGGAATCTTTACAATTTGTGAAGTGAAAGTTACTTGC CATTAAAATGGCTATTGTTTACGAATCATGAAAGATTCCAATTTTATAGCAATATGTAGATATATTATAT AATGTTATTTGCATCAACTACATGTATTTATCTATACCGTAATATGTTATATTATTGATACAAATGTTTG ATTTAATTTCATATTGCAAATATCTGAGATATTGGTTTTTGTTATAGAAAAAGATTTAAGAAAAAAAACT TGAAGAAAGACCAAAAAAAAAAGAAGGAATTAATTAATCAACCAGTAAGTAAAACACAAGATATGTCTTA AAGATTTTGATTATATATGTGACTAGGCCCCACCAAATAGTGATAGTTTGCCATCGTTTGAAACCAAAAG CTGATTATTTGCTTTATATTCCACATCAGAAACATTTCACTTCTTCCGTCATTTTAGAGCAACAAGTCAT TAATTAACAGCTAGCAAACAGTGTACGAAACGTACAGTGTATGCAGTATGGTGGTGTGAATATAGTTTGC GTACTAACACTAAAAGCGCTTAAGAGGAGAGCAATATGCAACGTATACAATTAAAGTGCATTGCACTGTG TAGATAGTACTACTATCTACACAGTGCAACAAACTTTTTTTCTTCTCCCATCAATGATGGGCGCACTATC TTTCATCACGTGATTTACTTTTGACCAATCGTAGAGCAAGATTCTTAGTATGTGGAATATAAACAAGTAT AACTCATTAAAGTTTGATGTTCCTAACCCAATTAAAATTGAGGAAAAAAATCCAGTCTTGTAGAATGTTA CTTTATAGAAAAGGGTTCAGTCTGGTATTGCTCAAGCACTTTGACCCCCAAGGAGTTGTGAATACAGCCC CAGATAATTTAGTTACATTGCTTTTCAGAACTAGTGGAACTTGGGGAATGAGAGAATAGTTAATAGCTCA AGTATGAAATCTCTTGACTAGGAACACATAATTTGTGGTATATATTTAACAACTAAATTAATCATACCCT TACCAATTACATGTATGTGAAAAATTGATTTGTCCAAATTTATGCTTTTGGAATGTAAAGTTATTTAATA AAGGCCTTAATTCAACCAATCCACCTTTCATTCTTGAGTTACAGAACTCACAAAAAATATCAGGTTTACA AGGGGTATGAATAATTTAGTAAGTTGTTAAATGTATTATTTAAATTAAACTGCCATTCTAATGAACAATC ATGTACTACATGTATATTGCCAAATAGTTATTTATGATGTACTTATTTCATTACATGTGTGCGACAACTT GAAGAAAAATTATGCGATTAAAAAACAACAACTTGGTTTAAAGGTAATTCCACTCTTCAAATTAGGAGAT AACTATTTGTTTTGATCTAATTTCTTTAATTTTGTATTTACAATGTACATGTACATTGAAAACTACAGTA ATTGTTTTTTGAAAAAGACTGTGCAATGTCTTGTATTATCATCATGAGTTACTTACAAGACTGTCCAAAT TTATGTTTACATATTTACATTTTATCTCTTGTAGAAAATAACAATATTATATATTTATGAATTCTATTTT TTCAGTTTGTTTATACATAATTTTGTGGCTGTTCTTAATATCTATATGTAATACATGTACATGAAGTGAT TCAATAGTACTATGCCAGATTTACAGGTCTTGTGTCAAATTTGAAATAATTCTGTTAATTTTTTTTTTGC ATTGAATAATTCAGTTGAATGCAATGGAGTTCATTATTTTTGTATTTCAAATGTTCAGTGTACTTGCAAG TTATTGCAAAGAAAATTGATTAAAAGCGTAATCTACATTTTCCATACATACTAATATTGTGACATTGTGT GTATTTATGTTTAATTCAAGATAAACTAACTGCTTGTTGAGTTTTGCTTTATCCATCTGGTTCAATCATA TTATGCTTCATAATGTTGTATTAACAGTAATTAAGTAAAAGATCCCCCTTTAAAAAAAAAGGAATTAGGA AAAGATTCAGAAAAAATGATTCAGCTTTTCCTCTTCAAATTGGCAACAGTTTTTTTTGTAATAAATTTTT TGAAGTAGAAAAATCAATTAGAAGTTGCCAGTTTGTACACAAAAATAGTGATTAAACAATTTAACTCTGC ACTGCCAATTTACAGACTTCAATCATTATTTTTTATTGTATTGCTCTTATTCGTGACAGCAAATAAAGT
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???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds