Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.searchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_030978486.1 PREDICTED: Strongylocentrotus purpuratus uncharacterized LOC765151 (LOC765151), mRNA GAACACACACTAATGTGAAGACGCGCGGCACTTGTGCACAGCATTTACATGCATTACCAATCAATCCGCT GCAACTTGTTGACTGATACGGCAAGTGAAAACAAACAGTCTTTCTTGCAGGAGCCTAACAACCCTTCAAG CCACAATGACAGTCTCTAGATCTTTTCCATGACTGATTTCCTCTCTGGACTATGACAGCGCCCATGACAG CCCTCGGTATGGGAAACCAACGATACTTTGACGTCTACCTGGACGACCCCAGTTCCAGTGAAGATGAATA CGTTGACCTCAGTCGACCTTTGATGTCCCCAAGGAAGTTTGCTCGCAGAATACCCGCACGCCCCACCCCG GTGAAGACGAACACGCCAGACACAAAACTACCAAAAAGGAAGCCGGTATGGTACTTTAAGAGGAAGAAGG ATTGCCTCCAGGCTTTCTATGTTGTCATGATCATTATGGTGATTGTTCTATTTGCCTTAGTTTTGATGAG GATCTTGAAGGATGCCGCCAAACACCGGACCAGTGATGACGAAGATACAAATCATCTATCTGCCATTGCC TCATTCGGGAACTTTGCCATGGGTAGGCCTTTTGGGATCGGCATGCCGATTAAACCCTCGGTAAAACCCA CTGTGTCTTCCAATTTGAAAGAACCTCCAAAGACCCCCACTGTTGCTAGTCAAGATGAAGATGAACCATC CAAAGCTGATGCTGCTAACCCGCAGGAAGAGCCTCAAAGAACAGTACTACCTTGTACCAAGTACACTCTC CAGGATGTCTGGATCCAGAACATTCCACAGCTACAGATAGAGTCAGGCATCAGACTCTTGGATGTCAACC AAGACAGTGTGCTTGATGTGATCATAGGATTTGCAACAGATGTCGGTTCATATTTTGCTGATGAGTACCT ACTATGTTCCATTTACTTCAACGGATCAACACCATGTTTTGGAGGAGTCCTAGCGTTGGATGGAATCACT GGTCAGGAGCTCTGGAGGCACTATACCAGTATGGAAGTCTTCGCTGTTAACTGCAATGGTGACCTGACCG GGGATGGGGTCAACGACTGTGCCATAGCAGGCAGAGCTGGGGTGATGGAATTAGTTGATGGAGCTAGCGG GATACTACTTTGGAAGTATCATGTACAGGAATCAGACGAAGCTCTCAGCAACTTCTACACGGCCCAGTTC ATCCATGATGTCAACAACGACGGTGTGAGAGACCTGCTCAATGTCCTGGGGGGTGACCCTATCAGAAAAC CAGGTGCAGAGGTGGAGCACAGTGGAAATCTGATGATACTGAGCGGATTTGAAGGTAACGTAATCAGTAG GTGTGAAGTACCCGACAGGATGGAATCATACTATTCACCACAGATTTACTACCAGCAAGGTGGGAAAGCG ATGGTTCTCTTTGGAACAGGAGGAGAGACAGTTGGAGGTTCCCTTTGGGCTTTACCCTTAGAAGATATCA TTATTTGCAACATGAGTCAGGCAAAGGTCATCTATACTGACCCTTACAAGGGTGTGATGACGCCCCCTGT ACTTGTTGATCTGACCGGAGATGGCGTAAAGGACATCGTTATGTCCATGTTTAACTCAACCATTGTTGCG TTTAATGGTCAGAGCTATGAACAGCTGTGGAATTACACTTTGCCTTCTTCAGAATCATACAGTACTCCAG CTGCAGGGTTTTACAACGATGATGATGTTCCTGACTTCATGGTCGTCTACAACTATGGGCCTGGCTACCC TCTCTACTACTACGTACAGATTAATATCTTGGATGGAAGGAATGGACAACCTCTTCTCCAGAAAAACATC ATTAGCTCAGGTTCTACAACCACTTCTCCCTTGACTGTAAGTACTGAGGGATATGGCAATGATGCATACT TCTACTGGAGACTAGGTTGTGAAGGGCATGAGCAAGAGACAGAGGCCTTTCATTTTCTTGGAGAAGAAGT TTCTGTTAAGGATCAAGGCAAAAAATCCCTGAGTCGAACCAATTTTTGTCAGGAGAGGTTCAATACAGGA TTTGTGACGACGGCAAGCCTACTGAATCAGCACATGGATGCTCCTGGGCAGAGTATCTATACTTCAGCTG ACCGCTTTGCAGATGAGCACAGATATGAAGTCAATGCTACTCGTATGGCCATGGACTACCTGGACAAATA CCCTGAAGTAATAAATATTGTACTCAACGCACAGAAAGAGCAGAACGAGCAAAAATACGACAAGGAGCAG AAAGAAAACAACGACCAGAAATACGACAAGGAGCTGAGAGAAAACAACGAGCAAGCAGCGGTAGAACCAT CCTCACCAAAGAAACAACATCAGACTCCCAAGCTCACAACCGCATCTCCACACACCGAGACACCTACACT TGATTTCCAGAGTGAGTATTATAAACTGATGGCCCGATTGTCTGCCTTATCGGACAATCTCCAGGATCAA GGTGATTCTCCCGGTGATGAGGATGACGGATTACCTGACCAAAGGGATCATTCAAACAAAGAGACCAACT ATGAACTAAGTACTAAGAAAAGTGATGATAGGAGCTCACCAGAACTTAGAGCAAATGAAGCAACAATGAC CACTACCTTACCGCCGGATGATGATTCTTTGTTGGCTGGAGATATTGCAGGGAAGCTCAAGGATCTTGGT CTCCCGGATTCTTGGTTTGGATCTCCAAAGGAAAAGAAATCGGGAGGAGAAACGGGCGATGAAAATCCCT TCGATAACCTTGATGGCCTTTCAGAGGAGGAGATTGAGGACATCATCAAAGACCTCCTTGGACTGGACAG TGAAGGGAAGATTGGAGGAAAGACCAGTAGCTTCCTGTCCAAGCGCAATGCCAGGTTCTTAGATGCAAGG TCCAGCAGGTCCAAGGATGAGCAGCACCTGAGATCACGCCGTCATGCTGGGCTCCATGATGCAGGAGGGA TCCAGAGACTCATCTCTACAGGAACCCTGGCTCCACCTCTTAGTCCAGTCCTGGATGACCTACCCAGCAA CCCTAATAGCATCGATGTCATCTTTGCGACATATTGGTTCTATCCTAAACCCAACAGGGTCATCACAGCT AAAGAGCAAAAATGCATTGACGATTGGATGGATAATGAAAAACAGAGAATGGATCCAAGCAATGAGTATT ACGGGCTTGACCATGATGCTTACGATCATCTGGGATCAGAACATTGTAGGAAGTTAGCTGCTTCTGTTCC AGCGCCCCCGACAGATGCGCCTACCGACCCTCTCAACATCTACCCCTTCAACCTGGATGCAGGGGAGATG ACAGTCTACAGGCTACGCCTCTCATGTGACTGCGGTCTCAAGGAGGCGCAAAGGAGCAACCCAGGGGCGC GTTGTGCCAGAATCTTACCCTACCACCAGCAGGGGTGGGGTGCATACATGGGTACCTACGGAAACACCTA CTTCACAGAGAGAACGAAAAAAGATGGAGATGATTAAACTTTGTTTTAAAGAGGCCTAAAGGAGAATCCC AGGGGCGCAGTGTACCAGAATAGAATGTTACCACCAGCAGGGGTGGGGTGCATACATGGGTACCTATGGA AACACCTACTTCACGAAGAGAACAAAAAAAGATGGAGATGATTAAATTTAGTTGTAAAGAGGCCCTTAAG GACAAACATACACTTCCACAGGCACTGCCGACAACTGACAGAAGAAAATAAAGAGATAAATATATTTGTT CATTCTTTTTTAGAGAGAGGAATTGTATAATATATAGATTTTATGGGCATTCATTAATTTGTAAAAGCAT TATTATAAAAAAGAGGGTAATATTAAAGCGATTGCATTAATAAGGTATGCATTCTAATTCCATGGTCTAT AAAAACATGTAACCAGATGCTTGATTTGTTAGGGAAGAAGATATATATTTTTATCATATCCATGATATAT GAAAACAAATGTACATAGAAGTGTAGAGAATATCCTCGAAGACTGGTCGAAAGTTTTGGTTGCCTTATTT TTCCATTTAACTCATAAATCTTGTAACAAAACATCAACAGGCAATTCATGTACAATGAAGTAGTGGCATT ATCTTGCCAGTGCGATGGGACCTGCTGATGTTAGAGTGCTCAAGTGAAACACCCACCTTTTTGTTCTGTT AGTTTACAAACACTACTGTATATGCAATTGTATCCTTGTATCAAGTTTGAATAAGCATGCAAGGCTGAAG GGATTAGTTTTAGGGTGTATAAGATCAAAGGTCAAAGTTCACACGGTCATAAAAGTGTTAATGACAATTA TTAATTATATTGTTACCGCGATAACTTGTAAAGTATTTAAACAATTCAAACCAAACTTTGAGTTGAAGTA TGAGTGAAAGGGCAAGGATGTACTTAGATTGTGGGTGTATGAGGTTTGAGGTCAAAGGTCACAGGGTCAT AATGGTGTTAACAAAAGCCAGAAAATATGTTTTACTGTTTGTACAATTTGCAATTAAACTCAGCTTTTAG GAATGGTCCAGAAGGTTTCTAACCTCCACCTTGGAATGGTCAGCAAGAGGACATTACAACTGTGACCTTT GAGAATTTTATCAAAGACCAGAGGTCACATTGACAGCTATTGCTTTCAGGAGATTAACTTGCTTACCGAA GATCCTAGAGATATATATTCTGTATTGAGATCAAAAAGTTTAAATCTCAAATGTCTTATCCTAATTGTTA TCACCATATACAGCATTTTCAATGTGTTACAATAACAGTACTTTCCATGAAATGTCCATGTATATTACTG GACACTGTAGGCATGCCATTTAAATTGATTCAGCCATGTGCTCTTTAGAGATGACTATATGAGTGAGGCA GATGTTTGTGCTCTGTAAGGCTATTTTAATGAAATTAGGAAAAACAGGGGTCACAATGTCATGCATAAAA CACTAAGCTGTGTGTATAGACAATGATAAAGAAAATAGTGGGGTTGCGTATTTCAACTTCTTGAGTTTTT TTGGAGGTCGAATTAGTTTTTGCAGAGGCACATCAATTGGTGTAATATCATGAAATTCTATCTGATAAAG AATAATCATATTTGTATATTTTTGTATTATTTGTATATTTTGTTCTGTCCATCTTTTGTTATGCAATAAC ACAGGGTGGGTGGGAACACTGGGGTTAATAAAGTGTAAATTTATTTAGGCGATTTTTATTTCTCGGGAAT CGTTCAGATTCTTTCCATTTGCTATATTCATGAACAAGTTGACATGATGTTAATTTATTTTCAGTGTAGC TTGTCACAAATAAATGAATTCTCTGGTCACATAAAAACATAACAGTAAAAAATTTAACAGTAAAATGTCT ACTCTTGTATTGGGAGAAAACAAATTATTATTAACAAATATCAAATGCTGTTCCTATTCACCCTGGTGTT CTTTTTCTACTTGTTTTAAAATACTGTTGCTTAGTTATACATGAAATGGTTATTGTATCTAATCTTGAGA AACACAAATAAATGCTGGTGGAAATATTAAAGATAAGGTCATTGTATTGTACAGCTCCTCCAGTGAGATG ATGATAAATTTGTCTTTTCTCATGGGATTGTCGTTTTAAAATGTGATGAATATTTTTCGTAGCTTAAAGA AATATAATGGCATTATTATAAGGACATGTCTGCGACCCGTCCTATAAAGAGTTGATATCAATCACAGCTT ACTTGCGATTGATATCTATCGCAATTATGTTCATAAAAGATGAAAGACTGCTAACTAGCAATTGATTTTG AATTAATCACAACTTTTCTTAAGATGGGACCCCCGAGTGCAGAATTCAATTATTGTTGGTGATGTTTGTC AAGTTGATCAAAAGTTCTTTTTGAAAAACCTGAGATGGTAAATGCATTTACCGGCTCCATATCCTAACGA TATGGTTCTACCTCAGCATGATATAATTATGATTATCAACAATCATGCCGTTAGTTCCAGACGCGGTTTT TAGTGCCACTACATTTTGCTAATCTACCTGTATTTAGTAAAATCTTCTTGTATTGATAGTCTGGTAAAAT TGACTCAGATTGGAATTTTGTTAATGTATGAAAAAACATGTTTAAATCTCCATTACTAAATGGTAAAATG GTAAATAGTTCTATCATTAGAGTCATGTCTTGTTTTTAAAGGAAGGTGCCTTTTTACGTTACAGATAACG TTTAGTTCACACAAATGTACAAACAAGATATTCAATATAACATTCAACAACAATAGGTGGCTTGAATATA AAACAATTTGGCACAAGATGA
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds