Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Search
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
MIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
MIM Diseases
GO Terms
Search
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
JBrowse2 Tracks
Echinobase UCSC Track Hubs
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinoderm Anatomy and Development Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.echinobaseSearchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???searchGeneExpression.header???
Gene Symbol
Clone Name
Affymetrix Id
Search Synonyms
Xenopus
tropicalis
laevis
Developmental Stages:
All
life cycle period
gametogenesis
oogenesis period
previtellogenic primary oocyte stage
not fully grown oocyte stage
fully grown oocyte with centered germinal vesicle stage
fully grown oocyte with off-centered germinal vesicle stage
fully grown oocyte with no nucleus stage
mature oocyte stage
spermatogenesis period
developing spermatozoa stage
mature spermatozoid stage
embryogenesis
1-cell stage
cleavage period
2-cell stage
4-cell stage
8-cell stage
16-cell stage
28-cell stage
32-cell stage
56-cell stage
60-cell stage
blastula period
very early blastula stage
early blastula stage
mid-blastula stage
late blastula stage
hatched blastula stage
swimming blastula stage
late swimming blastula stage
gastrula period
mesenchyme blastula phase
early mesenchyme blastula stage
mid-mesenchyme blastula stage
late mesenchyme blastula stage
invagination phase
blastopore formation stage
early gastrula stage
mid-gastrula stage
late gastrula stage
organogenesis period
prism stage
larval development
early feeding larva period
early pluteus larva stage
4-arm pluteus larva stage
late feeding larva period
6-arm pluteus larva stage
8-arm pluteus larva stage
competent pluteus larva stage
metamorphic larva stage
adulthood
juvenile period
early juvenile stage
late juvenile stage
adult period
adult stage
very late blastula stage
vegetal plate stage
open mouth stage
early prism stage
late prism stage
early pluteus stage
early organogenesis stage
mid-organogenesis stage
late organogenesis stage
very late organogenesis stage
mesenchyme blastula stage
64-cell stage
motile blastula stage
invagination episode
stage 1
stage 2
stage 3
stage 4
stage 5
stage 6
stage 7
stage 8
stage 9
stage 10
stage 11
stage 12
stage 13
stage 14
stage 15
stage 16
stage 17
stage 18
stage 19
to
Optional
life cycle period
gametogenesis
oogenesis period
previtellogenic primary oocyte stage
not fully grown oocyte stage
fully grown oocyte with centered germinal vesicle stage
fully grown oocyte with off-centered germinal vesicle stage
fully grown oocyte with no nucleus stage
mature oocyte stage
spermatogenesis period
developing spermatozoa stage
mature spermatozoid stage
embryogenesis
1-cell stage
cleavage period
2-cell stage
4-cell stage
8-cell stage
16-cell stage
28-cell stage
32-cell stage
56-cell stage
60-cell stage
blastula period
very early blastula stage
early blastula stage
mid-blastula stage
late blastula stage
hatched blastula stage
swimming blastula stage
late swimming blastula stage
gastrula period
mesenchyme blastula phase
early mesenchyme blastula stage
mid-mesenchyme blastula stage
late mesenchyme blastula stage
invagination phase
blastopore formation stage
early gastrula stage
mid-gastrula stage
late gastrula stage
organogenesis period
prism stage
larval development
early feeding larva period
early pluteus larva stage
4-arm pluteus larva stage
late feeding larva period
6-arm pluteus larva stage
8-arm pluteus larva stage
competent pluteus larva stage
metamorphic larva stage
adulthood
juvenile period
early juvenile stage
late juvenile stage
adult period
adult stage
very late blastula stage
vegetal plate stage
open mouth stage
early prism stage
late prism stage
early pluteus stage
early organogenesis stage
mid-organogenesis stage
late organogenesis stage
very late organogenesis stage
mesenchyme blastula stage
64-cell stage
motile blastula stage
invagination episode
stage 1
stage 2
stage 3
stage 4
stage 5
stage 6
stage 7
stage 8
stage 9
stage 10
stage 11
stage 12
stage 13
stage 14
stage 15
stage 16
stage 17
stage 18
stage 19
All Stages (
AND
)
Any Stages (
OR
)
Anatomy Terms:
Brain
Cement gland
regenerating tissue
Eye
Gut
Heart
Kidney
Liver
Nervous system
Neural crest
Notochord
Otic vesicle
Pancreas
Skin
Somite
Spinal cord
Search Entire Anatomy Ontology:
Enter 3 or more characters
All Anatomy Terms(
AND
)
Any Anatomy Terms(
OR
)
Include successor tissues
Include predecessor tissues
Selected Search Terms:
Exclude These Anatomy Terms:
Search Entire Anatomy Ontology:
Enter 3 or more characters
Include successor tissues
Include predecessor tissues
Excluded Search Terms:
Experimenter:
Filter By:
Expression Patterns:
Ubiquitous
Mapped To Genes
Mapped To Clones
Experimental Assay:
mRNA in situ hybridization
Immunohistochemistry
cDNA Libraries
Source Type:
Community Submitted
Literature
Large Scale Screens
Note: Each filter can increase search time, particularly ubiquitous.
Search
Reset
Other Expression Resources
XDB3
(
in situ
images from
N.Ueno
)