spec1 Nucleotide Sequences

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Echinobase

Gene Literature (20)

Nucleotides (8)

Interactants (26)

ECB-GENEPAGE-23183534

Show: All S. purpuratus L. variegatus P. miniata A. planci

Nucleotide sequences for spec1 - All

Models - Gene (1)

Models - mRNA (1)

mRNAs (6)

ESTs (0)

Models - Gene (1)

Source	Version	Model	Species
NCBI_REFSEQ/JGI	5.0	SPEC1 >SPEC1 gGCAGCCCAATTATTATTTACCGATGAGGAAATAACAGGTACGAGAAACAAAGTCTTAATGTTTCAATGTTTAAAGTGGGAGACCAAATCTATGACAAGAGGGtattataaaacaattttaaacaTGATACTAGTATTGCAGTAGagcatcaaaagaaaagaaaatcactaAAGATGTGAAAATAACTCTCGTTAACATGAGAGGGTATTAgttggttggtttgtttgttttacctgactgctaagaaagcatttgtGTGCTTGTAGCCTTGTAAGTATATCAACCACATGATCGACGGCTTTCAATCCCCTCCGAGGGACTGGgtaatgtggattaatgccttaccaaaaggcacCAGCGAtgcgacttggttttgaacacgggacctcccagttatgagaccactgctctaccactgagccatcacgtcTGCTTGCTTTTTGATGATTGCAATACTGAAGAAATCAAGCAAAATATGCCTAATTATGAAAACGAATTCTTATTCCATCCAACAATTTCTAGTCATGTAAaagtatttgttttcatttcgtAATTGCCAGTTTTTCActagtttatacaaaatatattatgtatattactCGATGTTTCCTACAAACATCTCCTGCTCCTTACTGACAccatacatttatttgttatcaccTCTTTGTAGAATTCGAGAGACGGTTCAAAAACAAAGACACGGATAAGAATAAGTCCATCACAGCAGAGGAGTTGGGCGAGTTTTTTAAATTAACTGGAAAGAGCTATACTGATAAACAGATTGACAAAATGATCAGTGATGTTGATACAGATGGTGAGTTTATAGTGAAGACTAAGAAAATAAGAGTTGATTAAAATCTGACCACAACACGTAAATTGAAGTTTAATAATCTATGACTTGAAGCCTAGTTTTATTTAATATTGGTTGCAAAATCCGTAAAAAAAGTTTAACATGTTAACAATGAATTCTGTGATTTTAAAACGGGCTGTTCATTTCGTGTTAGAGTTCGTCGCACGACAGGAAGCAGCCAGAATTTTTCCCCTGAAAAGGGGATATCTTTAAGTGATTTTTAAACAATATGTCAAAGATGTTTAATTGATGCTTTTCAGTTTACAGAACATATGCCGTGGACTCGAGAATACTTTTAAATCTTTTACATAATTGATGTCAAATATAATCAATATCTAGCTTGAACGTCTGTTTATAACGTATTATAAAAGAGGTCATCAGGTCAACAATAATTGTAGTAAAAggtaaaatcaattaaaataaaaaaaaagtgtagtacacaattttattttctatgGTGAAATGAGAGCTTGCCTTTTTGTCAATACATTGTTCTTCTTTATACAAAGTAAAATGCATCCTTTTAAGACATGCTTGGCTTGTTTATGCACAGGTAAATAGGCCTACATCGTTTTGCTATTATTAAAATGtgattaattattatactgTGTGGGTGCTTTTCTAAATGTCCCACTATAACTGTGATATTTCATCCAGGAAAGATGAGTCAAACAGGGACAACAAAACGTCTGATCATAGCTACATTGCAATTGCACATGTTTTAAAGTTTCTGAATTTTTGCAGCCAAACGTACATTCTGGAGAAggcttttttttcattttgaaaagtcttTAATTAAAGAACAGAATATTATGCAGAACTTTAAACTGGAACTTTAGTGTTTTTGTTTCAATACTTTTATTGGTCATAACTGTTCGTACTTTACACAATTCAGTATCACTCAAATCATactcatttttttgttaacgAAAAAAAGGTCAGagattgctctctctctctctctctctttattttaacatAAAAGTGTTTACTTGTTATTACCTTAAGATGTCTAAATTCATTAGGCATTTATTTAAGTGAATTATCGAATCGAGCAGTAAGAATGCAAGATGAATCACTATTCGAAAAGGACTTGTGTGAGAACTAAAAAGCCTGTTTTTCTTCATTCGGCTAGAAAGCGGAACTATAGACTTTTCTGAGATGTTGATGGGGATTGCAGAGCAAATGGTGAAGTGGACCTGGAAAGAAGAACATTACACCAAAGCTTTCGACGACATGGACAAGGATGGCAACGGATCCCTCAGGTAAGTTGGACAGTGATAGAGTAGCAGGGGCGTTGGAAGTGGGGGCAGGGGgcgaaaaagtggggggggggcgaaacgcatttttgccccacaccatcccccccccccccagagtaaaaatggtttgtattttttaaccaaaaataaaataaaaattaataaagccTGAATTgcatcacatacaaaattatattccattcaaagaaaatgagagtaaacaggaattaaattttctaaacattccgcatgcccctatatttatcaattgaGGATTTGATAAAAGCGATACGCGGATGTcgtgaaaaaaattgtaagaggatgggaaagcgtgtgtgttttttagtatggggtgagaagacatgagcccctgagcactggcgtactgatgggggtaAATAAGGTTTGTTtataattcgataccagtgatttacacatgttgctgaaatgacatgattttccgggatttatttctcattttttaaatatgaaattatactttttatgcgttttttGAATGATGATAATTTACAACCAAGCAAAATTTATGCtcatttagaagccttcatgtctgGGCCTGCAGGACGGTGGGGCTCGGGGGCACGAACCCTCCCCTAACctcttttgaaaaagtatgttaaagagaataagaaagaaacaaagaaaaaagaatgagtgacctgccagtgtcacaaaatgaggcatcaaaatattctcatctgaccgtaattaaatgcctgaaaccaCTGAGCTtatgagggctccgccccctggacctcaccaagggcccaaaggcaggcccctggatgctcatctcaACGTCCAGTTCTCATCTGGAcccccgccaattagtgacctgccagtgtcacaaaatgaggcatcaaaatatggtCATCTGACCTTCAGGGGGCCCTGAACCCCACCAAGGTCCCTAAAGCGGGcccttggatgctcatctgaccgtatttaaatgcctaaaacctctgagcttacggggtctcggccccctggaccccacgacgggccctaaggcgggccccagGATGCTCatctggacccccccccctcctcccgccaattagtgacctgccagtgtcacaaataataaatatatcaaaatatgctgatctgacgtaattaaatacctaaaactcctgagcttccaggggcttaccaccctggaccccaccaacagctttaaggcgggcccctggattctcaactgaccgtaattaaatacctcgAACCCCCTGAGCTTCAGAGGGCTCTGAACCCCACCAAGGCCCCTAAAGCGggcccctgtatgctcatctgaccgtaattaaatgtctaaaacccctgagcttcatggggctcagccccctggaccctgccaattagtgacctgccagcgTCACAAATGattaaggtattaaaatatgctcatctgaacataattaaatgcataaaacccctgatctttcgggggcttcgccccctgaaCCCCGCATAAACTATCAACCAGACAATACTAGCTCCAAGGAAAACTACGATCTACCACCTGAGAGAACATACCCTATAGGATAGTGCAAACAGAATAGGTGTTTTAGGGATGACAATTATGCGGGTATCAGTAAATTTGTATCACGggataaaaaaaatgtctggATAGTTTGTGTTTTCAGTCTGTACCCGGGTCGTGATTGTCCAGACGGATGGAGATGATTAATGTGCTTGTTATGCTTGTACAAGAGTAGATAAATtaccatattttttattttctttatggtATGGTCGAGATGAGATTTAGCACCTCTATGCTGGATCAATATTCAATACATTGAAAAGAATATTCGATGGACTTCAATGGAATAATCCAAATTTGGAGAAAGTGAGCTCAATATATTTGCTATTTGTTAATTATTTGCTTGCAGTCCTCAAGAGCTGCGTGAAGCGTTGTCAGCAAGCAAACCACcgatgaagaggaagaaaatcAAAGCAATCATCCAGAAAGCCGACGCCAATAAGGACGGTAAAATCGACCGTGAAGGTGAGTGCATTTTGGAATGATATGGGGAGGGGCACCGATCTTActcttaaagcccaagtccactccaaaaatcatttactttcaatagaagcagaaaaatcagactaaccaatcaaaagaAAGTCGTAGCAAAATGGATTACtaataaaaaagttatgaatttttaatgacattaaaaactttgaaaatcactagacaaattggcaactcactcatgagtctgtgacgtcatgtcctcactatccactaattatgtTCGTTATATTGAtataattttcccttttttctccttaagaatcttatttcttcacaccagcatccaagttagattaaaaataacatgtttttgtgtggatgcactaatatagagtgaTTTgtttccagttaaatcatgaacaatgtgaattttgataaactaatttatatacaaatcGATAATtgtgaatatacaatattcagaaaatagtataaattcttcagAGTTCATagaagattttgtgaaatgtcatgcacgcaatatgatacaaatcatataacctgggcaaataAGTTTTGgtgaaataaaagggaaattaatgggattaaaccatatagagcaattgataaatagtgaggatatgacgtcacaaactgataaccatcttggcaatttgtgttgtgattctcattgttccatactTCCATActtttacatactttttaaaaattcataactttcttattagttatccgattttgctcaaactttttttgattggtttgtctgatttttctgcatttattgaaagtaagttattttcgagtggacttgttctttaaaattaaatacGAATTTGAAAGGCTGCTGATCAGAGGAAGGGTGTGGGAGGGGCCCAGGCGTCTTCTTTTTTCGTCCCTTTCCCCCAATGTCAAAACCTCAGTCAGCTGACGGTATAACAAGATTCTTATCATACAATCATGAACCCTCCATAATTGGTcctaaacatgtttatttcacAGTTAAATCGTATTATTAGTACTCGACTTTACctgtaatcatcaaaatattaatagTAGTTCTCCTTCGACGTCATTTTGTCTCGCCTGAGTAGTAGAGCGAGACATAGGAGTCACTATATTCGGCGTCGTAGTTGTCGTCTACAATCATGCTGTATTcgcaataaatattcatagaTTCGAGGTAGGATCACCAAATTCAAACCCAAGGTACATCTCTTacagccccactgtcctacttgtagctacttgctccctctagatagaaaacttccccaatcggtgcctgttgttcccccatgatcctctttttcttatgttagttgagagctgagttaatgagatagccacctgtcagtaacctcgctgtgtggtctaatcccctctgacccagtagtattgacggtctttaaaggggGGCAGAGCAAGTTCAAAGGTCAAcaaatttttcatgaaaagcaCTGTACACGCAATAATTGTGATGATAAGGTCGAAGATTCAAGGCCATCTTAGGTAAATATCGAACCTGATATGTACCTTAGTAGACCTTATGAACAACGCACAGTCTCAATATGATTTCGGATTGCCAGGTCAACAGTTATGTCATGTGAAAGAGATATTGCACTTGAGGGATATTCAATCAGAGGCAGAGGCATAATTCTCAATCGTGTGCAGTTGAATTTTTTCTAGTCTGTGTTTTTGTTCAATACTATAGGTTTTTAGATAGTATTAGCAGCAGTCATAAGTAgtgttttctcattttccagGGATAAAGTCAATGCAACATTACATTTATTGCTTTGCCGCGTAGACTGCCAGAACCAAAATTCACATCCTGAACTCCTGAAAGCTTGAAATGCCATACTTTTCATATGTGTATTGCGTTACCATTCGCATATTCGCGAGACGTAGGCGAGAAAACGTTTGGAGATAGCCTTATTTACCCCTGCGTCCGTCCGTTCGTCCTTCCCTCTgtaacaaatctggtttccgttcgataactttagtaacgTTTGACGgattttgataaaatttgatatgaaggtacatcatggtatcaaaacataGCCTAATTATGTACATCAGAAATAGCTGCAGtaaaatagtatacaaatatacactgtcttgagaggttctggttaaaactatgcgcaagaggtgactccaatagtacgaTTTGCTgagggcgcagccccgaagcaaatggtacttttggagtcaccgaggcccatagttttaaccagtacctcgaatagagacatggtatatttgttttatatcttgcatccaaaaattattttataacagaaaaaaaaaaaaaaaaatttcaactcccaaatagtaaacccaaatagtactctcatatagtactttctaaaaatatttcaaagatttctggtcatgtgacgagctctcaactaatcaaaagccaacaaatttatgatgcaggatataatatagACTATCTAAATAGAGGTACCTTGCTCtgacgtatataggccatttttgGTGAGGGGATCCTACGCTTTGCGTTGTCTGGTTTCTTTTCATTCACTGcatattttttctccttttctaccATACAGAATTCATGAAGTTGATTAAATCGTGCTAA	S. purpuratus

Models - mRNA (1)

Source	Version	Model	Species
NCBI_REFSEQ/JGI	5.0	NM_214603.1 >NM_214603.1 GGCAGCCCAATTATTATTTACCGATGAGGAAATAACAGAATTCGAGAGACGGTTCAAAAACAAAGACACGGATAAGAATAAGTCCATCACAGCAGAGGAGTTGGGCGAGTTTTTTAAATTAACTGGAAAGAGCTATACTGATAAACAGATTGACAAAATGATCAGTGATGTTGATACAGATGAAAGCGGAACTATAGACTTTTCTGAGATGTTGATGGGGATTGCAGAGCAAATGGTGAAGTGGACCTGGAAAGAAGAACATTACACCAAAGCTTTCGACGACATGGACAAGGATGGCAACGGATCCCTCAGTCCTCAAGAGCTGCGTGAAGCGTTGTCAGCAAGCAAACCACCGATGAAGAGGAAGAAAATCAAAGCAATCATCCAGAAAGCCGACGCCAATAAGGACGGTAAAATCGACCGTGAAGAATTCATGAAGTTGATTAAATCGTGCTAA	S. purpuratus

mRNAs (6)

Clone	Accession	Species	Library	Anatomy	Stage
	GHFM01025281 >GHFM01025281\| -	S. purpuratus
	JT111829 >JT111829\|>JT111829.1 TSA: Strongylocentrotus purpuratus WHL22.417635.0 mRNA sequence CGCATGCTCAGATTGTATCTACGAACTGGTATATTTGTTAGAACTGCAACCCCACACTACGCCTAATACG CCTTAAACATCAGCAACGACATTCCTAGCGTATGGTCACGTGCTTTATTTCAGGAGTTATCACTCTTTCT TGAATAATACTCTTCGTCAGCACTCCACCCTTACCACTCCTTGAAAGCAAGTCGACTAGAAGAGAAGTAT AGGTACCTGAGCTCCAGAGAAATTTTCTATCTTCAATTTTGCCGGATCTATCCCAACTTCCAAAGATGGC AGCCCAATTATTATTTACCGATGAGGAAATAACAGAATTCGAGAGACGGTTCAAAAACAAAGACACGGAT AAGAATAAGTCCATCACAGCAGAGGAGTTGGGCGAGTTTTTTAAATTAACTGGAAAGAGCTATACTGATA AACAGATTGACAAAATGATCAGTGATGTTGATACAGATGAAAGCGGAACTATAGACTTTTCTGAGATGTT GATGGGGATTGCAGAGCAAATGGTGAAGTGGACCTGGAAAGAAGAACATTACACCAAAGCTTTCGACGAC ATGGACAAGGATGGCAACGGATCCCTCAGTCCTCAAGAGCTGCGTGAAGCGTTGTCAGCAAGCAAACCAC CGATGAAGAGGAAGAAAATCAAAGCAATCATCCAGAAAGCCGACGCCAATAAGGACGGTAAAATCGACCG TGAAGAATTCATGAAGTTGATTAAATCGTGCTAAGCTACTCGGTCAAGATGATGAACGCTATCGTCTACT TCAACATCGACAACTTGTCCTTTTTATTTTTCCAAAGAATATCCATGTCCGATAAGTGACATGGTACACA GGGAAGAAGAGAAATTTAACTTTCCTAATTCTTGATAGGCGGTAAAAGCACTTATCTTAAATTACTTTAA CGGTCTTTCATTGTGGGGGTATCGTAAGTCATTCACGTTACTCATTGAATTAAATTGAATGGTTTATTGA GCAAACTGAAAATGGCAGCATGGGGGCT	S. purpuratus
	K01649 >K01649\|>K01649.1 Sea urchin (S.purpuratus) Spec 1a protein, mRNA AGACTTTTCTGAGATGTTGATGGGGATTGCAGAGCAAATGGTGAAGTGGACCTGGAAAGAAGAACATTAC ACCAAAGCTTTCGACGACATGGACAAGGATGGCAACGGATCCCTCAGTCCTCAAGAGCTGCGTGAAGCGT TGTCAGCAAGCAAACCACCGATGAAGAGGAAGAAAATCAAAGCAATCATCCAGAAAGCCGACGCCAATAA GGACGGTAAAATCGACCGTGAAGAATTCATGAAGTTGATTAAATCGTGCTAA	S. purpuratus
	AH001103 >AH001103\|>AH001103.2 Strongylocentrotus purpuratus ec1a (ec1a) mRNA, complete cds ACTCTTTCTTGAATAATACTCTTCGTCAGCACTCCACCCTTACCACTCCTTGAAAGCAAGTCGACTAGAA GAGAAGTATAGGTACCTGAGCTCCAGAGGAATTTTCTATCTTCAATTTTGCCGGATCTACCCAACTTCCA AAGATGGCAGCCCAATTATTATTTACCGATGAGGAAGTAACAGAATTCAAGAGACGGTTCAAAAACAAAG ACACGGATAAGAGTAAGTCCATCACAGCAGAGGAGTTGGGCGAGTTTTTTAAATCAACTGGAAAGAGCTA TACTGATAAACAGATTGACAAAATGATCAGTGATGTTGATACAGATGAAAGCGGAACTATAGACTTTTCT GAGATGTTGATGGGGATTGCAGAGCAAATGGTGAAGTGGACCTGGAAAGAAGAACATTACACCAAAGCTT TCGACGACATGGACAAGGATGGCAACGGATCCCTCAGTCCTCAAGAGCTGCGTGAAGCGTTGTCAGCAAG CAAACCACCGATGAAGAGGAAGAAAATCAAAGCAATCATCCAGAAGCCTGACGCCAATAAGGACGGTAAA ATCGACCGTGAAGAATTCATGAAGTTGATTAAATCGTGCTAAGCTACTCCCTGAAGATGATGAACGCTAT CGTCTACTTCAACATCGACAACTTGTCCTTTTTATTTTTCCAAAGAANNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNAAATTACTAAGATATTATGACAAAAACCCTCTCAATCTGGACCTCTAGGAAGATCAGAGCCAT TCAATAATTTAACGGTCCTTAATAGAGCTATTCATCCGTATTTTATTTTAAATAATTATATTTGTTTATG TTCATGGGCATGTAATATGTTTGTTTAAACGGAAAATGAAACCAAACCAATCTAGAGCCCGGCACT	S. purpuratus
	NM_214603 >NM_214603\|>NM_214603.1 Strongylocentrotus purpuratus Spec 1a protein (SPEC1), mRNA ATGGCAGCCCAATTATTATTTACCGATGAGGAAGTAACAGAATTCAAGAGACGGTTCAAAAACAAAGACA CGGATAAGAGTAAGTCCATCACAGCAGAGGAGTTGGGCGAGTTTTTTAAATCAACTGGAAAGAGCTATAC TGATAAACAGATTGACAAAATGATCAGTGATGTTGATACAGATGAAAGCGGAACTATAGACTTTTCTGAG ATGTTGATGGGGATTGCAGAGCAAATGGTGAAGTGGACCTGGAAAGAAGAACATTACACCAAAGCTTTCG ACGACATGGACAAGGATGGCAACGGATCCCTCAGTCCTCAAGAGCTGCGTGAAGCGTTGTCAGCAAGCAA ACCACCGATGAAGAGGAAGAAAATCAAAGCAATCATCCAGAAAGCCGACGCCAATAAGGACGGTAAAATC GACCGTGAAGAATTCATGAAGTTGATTAAATCGTGCTAA	S. purpuratus
	J01207 >J01207\|>J01207.1 sea urchin (s.purpuratus) spec1 mrna TATAAAGCACATGTATAGATGCAATTGTTAAAACAATGATTACATAACACTTGCAAGAATACATTCAAAG ATAAAATTACTAAGATATTATGACAAAAACCCTCTCAATCTGGACCTCTAGGAAGATCAGAGCCATTCAA TAATTTAACGGTCCTTAATAGAGCTATTCATCCGTATTTATTTTAAATAATTATATTTGTTTATGTTCAT GGGCATGTAATATGTTTGTTTAAACGGAAAATGAAACCAAACCAATCTAGAGCCCGGCACTAACGTCCTT TGGCAAGGCATTAATTCACATTTACCACTCTCCACCCAGGTGTATAAATGGGTACCTAGCAATTGATGGG GTAATGATAAATGCAGGGCCCGCAGGACAGCAGTATTGATACTGATGTTCGCTAGCCTGAGTTTAAAAAA ATATTATTATCATTATTAATAGTAGTAGTAGTAGAAGTACTAGTATTTTATT	S. purpuratus

ESTs (0)