pmar1 Nucleotide Sequences

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Echinobase

Gene Literature (32)

Nucleotides (4)

Interactants (90)

ECB-GENEPAGE-23104829

Show: All S. purpuratus L. variegatus P. miniata A. planci

Nucleotide sequences for pmar1 - All

RefSeq mRNAs(2)

Models - Gene (2)

Models - mRNA (0)

mRNAs (4)

ESTs (0)

RefSeq mRNAs (2)

Accession	Version	Protein Name	Length	Protein	Species
NM_214508 >pmar1 AATCAACAAGATTAATTATTCGCTCCAAACAAGTAATCACCTATCATCAATCGCGTTCCAACTAGTTATCAGAATGGCAGATTACACCATGATCACCCAAGTGTCATCGAGTAGCATTCCTACCAAACGCCCTCGTCGTCGACGTCCCACCGTCTTTACTGAGTTACAGCTACAGATTCTAGAGACCGCGTTCAACGACAACCAGTATCCTGGTATCACTGCTAGAGATCAACTTGCTTCAAGTCTGAAACTTGGAGAAGACAGAATACTGGTCTGGTTTCAGAATCGTCGTGCACGTCTCCGTCGAGCCTCTCTTGTTTCAAGCTCTGCTCATCAACCCGTCATCAAGAAAGACGACATCGACCATCCTCGCATTCAACCAGCCCGAGTTATCGACTTGGCCGTCATCGGTCGTAAGCGGAAGAGATCGTGCGACACCGTTGAGGTCGACCAGACCACACCACCTACCAAGAAGATGAATTCCGTTTCTCCCACGTTCTCTGTTGACTTTCTCTCTCGAAGCAGTCGATCGAGATCCGATTCAACGATGCCTTCATCGGGTCGACACCACTTGCACCATGACGTCATCCAGCTCCAGCATAAGTCACCACATGACTCGACGAAGGGCGCCAAAAGTCCGTTGATGTCAGTAGACTTTCTCTCTCGTAGCAGCCGCTCTCCTTCTCCCTCTAAATCCAGGTATAACGCAGAGCATCTTTACCGCACACCGTCTTCATTCTCCACACCGATGGGTTATCATCCGTACGTCTTCTACGTCAACCTTTAGACCTTGACTGCATCGACTCATGAACTCTGAATGGATCTTCTTATTATTATATACTAATCTTGCCTTCACGGTCAACGATGCATTCATTTATGTAATCCCAAGTTGCAATTGAATAAAATGTCATATCTCTGTCAAAAAA	NM_214508.2	NP_999673.2 paired class homeodomain repressor	926 bp	NP_999673	S. purpuratus
NM_214508 >pmar1 AATCAACAAGATTAATTATTCGCTCCAAACAAGTAATCACCTATCATCAATCGCGTTCCAACTAGTTATCAGAATGGCAGATTACACCATGATCACCCAAGTGTCATCGAGTAGCATTCCTACCAAACGCCCTCGTCGTCGACGTCCCACCGTCTTTACTGAGTTACAGCTACAGATTCTAGAGACCGCGTTCAACGACAACCAGTATCCTGGTATCACTGCTAGAGATCAACTTGCTTCAAGTCTGAAACTTGGAGAAGACAGAATACTGGTCTGGTTTCAGAATCGTCGTGCACGTCTCCGTCGAGCCTCTCTTGTTTCAAGCTCTGCTCATCAACCCGTCATCAAGAAAGACGACATCGACCATCCTCGCATTCAACCAGCCCGAGTTATCGACTTGGCCGTCATCGGTCGTAAGCGGAAGAGATCGTGCGACACCGTTGAGGTCGACCAGACCACACCACCTACCAAGAAGATGAATTCCGTTTCTCCCACGTTCTCTGTTGACTTTCTCTCTCGAAGCAGTCGATCGAGATCCGATTCAACGATGCCTTCATCGGGTCGACACCACTTGCACCATGACGTCATCCAGCTCCAGCATAAGTCACCACATGACTCGACGAAGGGCGCCAAAAGTCCGTTGATGTCAGTAGACTTTCTCTCTCGTAGCAGCCGCTCTCCTTCTCCCTCTAAATCCAGGTATAACGCAGAGCATCTTTACCGCACACCGTCTTCATTCTCCACACCGATGGGTTATCATCCGTACGTCTTCTACGTCAACCTTTAGACCTTGACTGCATCGACTCATGAACTCTGAATGGATCTTCTTATTATTATATACTAATCTTGCCTTCACGGTCAACGATGCATTCATTTATGTAATCCCAAGTTGCAATTGAATAAAATGTCATATCTCTGTCAAAAAA	NM_214508.2	NP_999673.2 paired class homeodomain repressor	926 bp	NP_999673	S. purpuratus

Models - Gene (2)

Source	Version	Model	Species
NCBI_REFSEQ/JGI	5.0	PMAR1 >PMAR1 AATCAACAAGATTAATTATTCGCTCCAAACAAGTAATCACCTATCATCAATCGCGTTCCAACTAGTTATCAGAATGGCAGATTACACCATGATCACCCAAGTGTCATCGAGTAGCATTCCTACCAAACGCCCTCGTCGTCGACGTCCCACCGTCTTTACTGAGTTACAGCTACAGATTCTAGAGACCGCGTTCAACGACAACCAGTATCCTGGTATCACTGCTAGAGATCAACTTGCTTCAAGTCTGAAACTTGGAGAAGACAGAATACTGGTAAATATCTTTCTATTTATTAGCAACGACTGAAAATAATATATATTAAAGCAAATACTGTATCAATAACTAAGTGAAACAAAGATTTAGATTGAAAGCTGTCCTTTCTTATTGTGACTTGAGACTTACTCGTTTACTAAAAAATAGCTTCAGTCTTTGGAATGACGGGATAATTATTATGATATAGGCCTACAACATACTTAACTTAGTATAAGCTAGCTATAGTTATTTCAAAATGCTTTCCTTCTGCCACTGTTGAAGATTATTCTAAATAAGAGAAGCTGTAGTTATCTGAACGAAAGAATGTGCTATGAAACGTCGAAATTAATTGTATTTTGTTGATAGTTGATAATTGAAGATTTTTTTCCATTCTCTTTGTTTTGCTTATTTTCAGGTCTGGTTTCAGAATCGTCGTGCACGTCTCCGTCGAGCCTCTCTTGTTTCAAGCTCTGCTCATCAACCCGTCATCAAGAAAGACGACATCGACCATCCTCGCATTTAGTATAAGCTAGCTATAGTTATTTCAAAATGCTTTCCTTCTGCCACTGTTGAAGATTATTCTAAATTAGAGAAGCTGTAGTTATCTGAACGAAAGAATGTGCTATGAAACGTCGAAATTAATTGTATTTTGTTGATAGTTGATAATTGAAGATTTTTTTCCATTCTCTTTGTTTTGCTTATTTTCAGGTCTGGTTTCAGAATCGTCGTGCACGTCTCCGTCGAGCCTCTCTTGTTTCAAGCTCTGCTCATCAACCCGTCATCAAGAAAGACGACATCGACCATCCTCGCATTCAACCAGCCCGAGTTATCGACTTGGCCGTCATCGGTCGTAAGCGGAAGAGATCGTGCGACACCGTTGAGGTCGACCAGACCACACCACCTACCAAGAAGATGAATTCCGTTTCTCCCACGTTCTCTGTTGACTTTCTCTCTCGAAGCAGTCGATCGAGATCCGATTCAACGATGCCTTCATCGGGTCGACACCACTTGCACCATGACGTCATCCAGCTCCAGCATAAGTCACCACATGACTCGACGAAGGGCGCCAAAAGTCCGTTGATGTCAGTAGACTTTCTCTCTCGTAGCAGCCGCTCTCCTTCTCCCTCTAAATCCAGGTATAACGCAGAGCATCTTTACCGCACACCGTCTTCATTCTCCACACCGATGGGTTATCATCCGTACGTCTTCTACGTCAACCTTTAGACCTTGACTGCATCGACTCATGAACTCTGAATGGATCTTCTTATTATTATATACTAATCTTGCCTTCACGGTCAACGATGCATTCATTTATGTAATCCCAAGTTGCAATTGAATAAAATGTCATATCTCTGTCAAAAAA	S. purpuratus
NCBI_REFSEQ/JGI	3.1	PMAR1 >PMAR1 CAAGATTAATTATTCGCTCCAAACAAGTAATCACCTATCATCAATCGCGTTCCAACTAGTTATCAGAATGGCAGATTACACCATGATCACCCAAGTGTCATCGAGTAGCATTCCTACCAAACGCCCTCGTCGTCGACGTCCCACCGTCTTTACTGAGTTACAGCTACAGATTCTAGAGACCGCGTTCAACGACAACCAGTATCCTGGTATCACTGCTAGAGATCAACTTGCTTCAAGTCTGAAACTTGGAGAAGACAGAATACTGGTAAATATCTTTCTATTTATTAGCAACGACTGAAAATAATATATATTAAAACAAATACTGTATTAATAACTAAGTGAAACAAAGATTTAGATTGAAAGCTGTCCTTTCTTATTGTGACTTGAGACTTACTCGTTTACTAAAAAATAGCTTCAGTCTTTGGAATGACGGGATAATTATTATGATATAGGCCTACAACATACTTAACTTAGTATAAGCTAGCTAAAGTTATTTCAAAATGCTTTCCTTCTGCCACTGTTGAAGATTATTCTAAATTAGAGAAGCTGTAGTTATCTGAACGAAAGAATGTGCTATGAAACGTCGAAATTAATTGTATTTTGTTGATAGTTGATAATTGAAGATTTTTTTCCATTCTCTTTGTTTTGCTTATTTTCAGGTCTGGTTTCAGAATCGTCGTGCACGTCTCCGTCGAGCCTCTCTTGTTTCAAGCTCTGCTCATCAACCCGTCATCAAGAAAGACGACATCGACCATCCTCGCATTTAGTATAAGCTAGCTATAGTTATTTCAAAATGCTTTCCTTCTGCCACTGTTGAAGATTATTCTAAATTAGAGAAGCTGTAGTTATCTGAACGAAAGAATGTGCTATGAAACGTCGAAATTAATTGTATTTTGTTGATAGTTGATAATTGAAGATTTTTTTCCATTCTCTTTGTTTTGCTTATTTTCAGGTCTGGTTTCAGAATCGTCGTGCACGTCTCCGTCGAGCCTCTCTTGTTTCAAGCTCTGCTCATCAACCCGTCATCAAGAAAGACGACATCGACCATCCTCGCATTCAACCAGCCCGAGTTATCGACTTGGCCGTCATCGGTCGTAAGCGGAAGAGATCGTGCGACACCGTTGAGGTCGACCAGACCACACCACCTACCAAGAAGATGAATTCCGTTTCTCCCACGTTCTCTGTTGACTTTCTCTCTCGAAGCAGTCGATCGAGATCCGATTCAACGATGCCTTCATCGGGTCGACACCACTTGCACCATGACGTCATCCAGCTCCAGCATAAGTCACCACATGACTCGACGAAGGGCGCCAAAAGTCCGTTGATGTCAGTAGACTTTCTCTCTCGTAGCAGCCGCTCTCCTTCTCCCTCTAAATCCAGGTATAACGCAGAGCATCTTTACCGCACACCGTCTTCATTCTCCACACCGATGGGTTATCATCCGTACGTCTTCTACGTCAACCTTTAGACCTTGACTGCATCGACTCATGAACTCTGAATGGATCTTCTTATTATTATATACTAATCTTGCCTTCACGGTCAACGATGCATTCATTTATGTAATCCCAAGTTGCAATTGAATAAAATGTCATATCTCTGTCAAAAAA	S. purpuratus

mRNAs based on gene models(0)

mRNAs from cDNA libraries (4)

Clone	Accession	Species	Library	Anatomy	Stage
	AF443277 >AF443277\|AF443277.1 Strongylocentrotus purpuratus paired class homeodomain repressor (PMAR1) mRNA, complete cds AATCAACAAGATTAATTATTCGCTCCAAACAAGTAATCACCTATCATCAATCGCGTTCCAACTAGTTATCAGAATGGCAGATTACACCATGATCACCCAAGTGTCATCGAGTATTATTCCTACCAAACGCCCTCGTCGTCGACGTCCCACCGTCTTTACTGAGTTACAGCTACAGATTCTAGAGACGGCGTTCAACGACAACCAGTATCCTGATATCACTGCTAGAGAACAACTTGCTTCAAGTCTGAAAATTGGAGAAGACAGAATACTGGTTTGGTTTCAGAATCGTCGTGCACGTCTCCGTCGAGCCTCTCTTGTTTCAAGCTCTGCTCATCAACCCGTCATCAAGAAAGACGACATCCACCATCCTCGCATTCAACCAGCCCGAGTTATCGACTTGGCCGTCATCGGTCGTAAGCGGAAGAGATCGTGCGACACCGTTGAGGTCGACCAGACGACACCACCTACCAAGAAGATGAATTCCGTTTCTTCCACGTTCTCTGTTGACTTTCTCTCTCGAAGCAGTCGATCGAGATCCGATTCAACGATGCCTTCATCGGGTCGACACCACTTGTATCATGACGTCATCCAGCTCCAGCAAAAGTCACCACATGACTCGACGAAGGGCGCCACCAGTCGATTGATGTCAGTAGACTTTCTCTCTCGTAGCAGCCGCTCTCCTTCTCCCTCTACATCCAGGTATAACGCAGAGCATCTTTACCGCACACCGTCTTCATTCTCCACACCGATGGGTTATCATCCGTACGTCTTCTACGTCAACCTCTAGATATTGACTGCATCGACTGATGAACTCTGAATGGATCTTCTTATTATTATATGCTAATCTTGCCTTCACGGCCAACGATGCATTCATTTATGTAATCCCAAGTTGCAATTGAATAAAATGTCATATCTCTGTCAAAAAAAAAAAAAAAAAAAAAA	S. purpuratus
	GAVU01016254 >GAVU01016254\| -	S. purpuratus
	JT123346 >JT123346\|JT123346.1 TSA: Strongylocentrotus purpuratus SPU_014722.1 mRNA sequence ATGGCAGATTACACCATGATCACCCAAGTGTCATCGAGTAGCATTCCTACCAAACGCCCTCGTCGTCGACGTCCCACCGTCTTTACTGAGTTACAGCTACAGATTCTAGAGACCGCGTTCAACGACAACCAGTATCCTGGTATCACTGCTAGAGATCAACTTGCTTCAAGTCTGAAACTTGGAGAAGACAGAATACTGGTCTGGTTTCAGAATCGTCGTGCACGTCTCCGTCGAGCCTCTCTTGTTTCAAGCTCTGCTCATCAACCCGTCATCAAGAAAGACGACATCGACCATCCTCGCATTCAACCAGCCCGAGTTATCGACTTGGCCGTCATCGGTCGTAAGCGGAAGAGATCGTGCGACACCGTTGAGGTCGACCAGACCACACCACCTACCAAGAAGATGAATTCCGTTTCTCCCACGTTCTCTGTTGACTTTCTCTCTCGAAGCAGTCGATCGAGATCCGATTCAACGATGCCTTCATCGGGTCGACACCACTTGCACCATGACGTCATCCAGCTCCAGCATAAGTCACCACATGACTCGACGAAGGGCGCCAAAAGTCCGTTGATGTCAGTAGACTTTCTCTCTCGTAGCAGCCGCTCTCCTTCTCCCTCTAAATCCAGGTATAACGCAGAGCATCTTTACCGCACACCGTCTTCATTCTCCACACCGATGGGTTATCATCCGTACGTCTTCTACGTCAACCTTTAG	S. purpuratus
	NM_214508 >NM_214508\|NM_214508.2 Strongylocentrotus purpuratus paired class homeodomain repressor (PMAR1), mRNA AATCAACAAGATTAATTATTCGCTCCAAACAAGTAATCACCTATCATCAATCGCGTTCCAACTAGTTATCAGAATGGCAGATTACACCATGATCACCCAAGTGTCATCGAGTAGCATTCCTACCAAACGCCCTCGTCGTCGACGTCCCACCGTCTTTACTGAGTTACAGCTACAGATTCTAGAGACCGCGTTCAACGACAACCAGTATCCTGGTATCACTGCTAGAGATCAACTTGCTTCAAGTCTGAAACTTGGAGAAGACAGAATACTGGTCTGGTTTCAGAATCGTCGTGCACGTCTCCGTCGAGCCTCTCTTGTTTCAAGCTCTGCTCATCAACCCGTCATCAAGAAAGACGACATCGACCATCCTCGCATTCAACCAGCCCGAGTTATCGACTTGGCCGTCATCGGTCGTAAGCGGAAGAGATCGTGCGACACCGTTGAGGTCGACCAGACCACACCACCTACCAAGAAGATGAATTCCGTTTCTCCCACGTTCTCTGTTGACTTTCTCTCTCGAAGCAGTCGATCGAGATCCGATTCAACGATGCCTTCATCGGGTCGACACCACTTGCACCATGACGTCATCCAGCTCCAGCATAAGTCACCACATGACTCGACGAAGGGCGCCAAAAGTCCGTTGATGTCAGTAGACTTTCTCTCTCGTAGCAGCCGCTCTCCTTCTCCCTCTAAATCCAGGTATAACGCAGAGCATCTTTACCGCACACCGTCTTCATTCTCCACACCGATGGGTTATCATCCGTACGTCTTCTACGTCAACCTTTAGACCTTGACTGCATCGACTCATGAACTCTGAATGGATCTTCTTATTATTATATACTAATCTTGCCTTCACGGTCAACGATGCATTCATTTATGTAATCCCAAGTTGCAATTGAATAAAATGTCATATCTCTGTCAAAAAA	S. purpuratus

ESTs (0)