sqstm1 Nucleotide Sequences

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Echinobase

Gene Literature (0)

Nucleotides (18)

Interactants (60)

ECB-GENEPAGE-23048397

Show: All S. purpuratus L. variegatus P. miniata A. planci

Nucleotide sequences for sqstm1 - Lytechinus variegatus

RefSeq mRNAs(1)

Models - Gene (1)

Models - mRNA (0)

mRNAs (2)

ESTs (0)

RefSeq mRNAs (1)

Accession	Version	Protein Name	Length	Protein	Species
XM_041606730 >LOC121413780 TATTTTAAGAAACGATGTAAACAAACATTGAGCTGTCTTTCGCTCGCTTGGACGAACGAATCGATCGTTCCGTTTTGGAAAACGTAATGTCTACGTTCAATTTCGCTGAGTAAGTCCGGATTCGTGTGTTCCAGAAACGTCTTGCATTTGGGTATATAAAGGCAGCCACTCCCTGTCGATATTCATACTGCGATTCAGTGGTAGAATCTCCGCAAGCAAGAGACAACCGAGTTTCAACGTCTGCGTCCGACGTCAAAACCAGCAATAACTGATAACAAAAAGTTATCTGAAAATCAGAAACTACCAAGAATTATACGCCGCTAGAGATCAGACCACTTGTTTCACTTTTGACCAGCCATCTACAACAGGATTCAACGCAACATGTCGATGACAGTGAAAGCATACCTGAAGCGGGGAGAGAACGCAAATGCAGAGATTCGTCGCTTTGTGATTGACGTTGCTGTGAGTTCAAACTATGAATACCTTTCGAAGAAGGTAGCTCAAGTATTTCCGTCTCTGGGTGACCCCGACAATTTCACTCTCTCCTGGAAAGATTCCGACGGAGACAACATCACTTTCTCCAGCAATGATGAGTTGGTAGAAGCCTTGGGTCAGATAAATGATGACATCTTCCGGATCTATGTCAAAGGGAAGAAGAAGTGTTCCCGTGAAGCCCCGTCTACCAGTTCTGATGACGGCGGTCGGGAGGAGCAGGTGTACCACCCAGGCGTAATCTGCGACGGGTGCGAGAGTCGAATCCGCGGTCCGCGGTTCAAGTGCATCACTTGCCCCGACTATGACCTGTGTAAGCAGTGCGAATCCCGAGGCACCCACCCGGAGCACAGTTTCGTCAAGTTCCGCAAGCCTCAAGTCGGCCGCAGCCACCACGGTGGATTTTTCAACAGACCTGGGATGTTCCGCCAGTTTGGTCACCCTGGCTGGCGTCACTGGTGGCAGTGGAACCAACAACAGCAGCAGCAACAGCAGGAGCAGCAGGAGGGTGGTACCCAATCTACTACCCAACAGGAGCAGACCCAGGGGGCTGGTGGCTCTCAAAACAATGGAGGCTGTCCCATGGGCCCAGGTCCCTTCTGCCCCCCTCCTCCCCCACCCCCAGGGTGTCACATGCCACCCCCACCCCCACCTCCACCCCATGCTTTCCTGAGGGACATCGGACAGACCGTTGCCCAGATGCTTGACCCTCTAGGAATTGATGTTGATATCGACATCGACCACCAGGGTAACCGTACGCACTGTGCTGGAGAAGCCAATGCCTGCGGTGGAGGGCGAGGCCGTGGGAGGCATGGGCGTCGTCACGGGGGCAGAGGTCAGCGGGGATGCCGAAAGACATGGCATGGTGGTGAGCAGACGTCTATGGATATGAGCCAGGAGGATGCGGAACAACCAGGTCAAGAAGCTTCAAACAACCAAGATCAGGGAAGCACACAGAATGAAGCCAGTCAGAAGCAACCACAAGAACCTGTTGAACCAATGGAGACTACTGTGAAAGACGGAGCTGGTAGAAGTCCTAACGCCTCACCATCTGGGAGTGATGATGCCGACTGGACCATGCTTGAGAAAACAGGAGGAAAGGCTCCCTCCCAGACTCCACAGGAAGGATCTACAGTGCATCAGACTGCTCTGAATCAGATGATGGCGATGGGCTTTGACAATGAGGGCGGTTGGTTGACCAGCCTCCTGGAAGCAAAGAATGGCGACATCGTCCGCGTCCTTGACGCCATCAAGATCGGTCACCAGCCTTCCTTCAGTGGAAACTCCAAGTAAAGCTGTTCCAGAGAGATTGCATCGCGTTGCTATCGTAACCGTAACTTCGTTTAGCTTTGTTACTCTGTATGTTTTTGA		XP_041462664.1 sequestosome-1-like	1863 bp	XP_041462664	L. variegatus

Models - Gene (1)

Source	Version	Model	Species
NCBI_REFSEQ/JGI	3.0	LOC121413780 >LOC121413780 TATTTTAAGAAACGATGTAAACAAACATTGAGCTGTCTTTCGCTCGCTTGGACGAACGAATCGATCGTTCCGTTTTGGAAAACGTAATGTCTACGTTCAATTTCGCTGAGTAAGTCCGGATTCGTGTGTTCCAGAAACGTCTTGCATTTGGGTATATAAAGGCAGCCACTCCCTGTCGATATTCATACTGCGATTCAGTGGTAGAATCTCCGCAAGCAAGAGACAACCGAGTTTCAACGTCTGCGTCCGACGTCAAAACCAGCAATAACTGATAACAAAAAGTTATCTGAAAATCAGAAACTACCAAGAATTATACGCCGCTAGAGATCAGACCACTTGTTTCACTTTTGACCAGCCATCTACAACAGGGTAAATTGTGACTCTTTTTCTAATTCTACTTTTATTTCGGATCTATTTCAGACTCGATCGGAACAGTCTCTCTGCATCATGAGCTGATACCGGTTATATACCCCCGAATATATTGTCATAAATGTGTGGATAGCTGGCATGTCGGATTTGAGCAAGGAAATAGTATTTACTATTGCCCTGCTCATGAAATAATTAGTAGTTATTCACTGCCCTTTGCCTTTTCTCGTTTATAGCTTGGAAGAACAATCTTTGTTTGTTGACATATATGGAGAAACATCCAGTGTGTTTGCTCCACAGTGGCATATCCATATCCTTAGGAATTGAAATAGAAAAGGTCGAAAAGAAActggatatatattttaacaataaaCAGAGTTAACAGAGGGGTATAGCTAAAATGTGAAATAGTAAGCCTCCAAGGCCATGTCCTGGGATTCCATATtgaaataaccccccccccccccgccccagcATTGGATTAAATTTTTtgtgacttaaaaaaaatcaatttctgaTTGCCTCATGCAAACTTGCCTGAAACagacaatgatattattaatattataaacAACTGTTTAATCGTTCTCATTTTCAGATTCAACGCAACATGTCGATGACAGTGAAAGCATACCTGAAGCGGGGAGAGAACGCAAATGCAGAGATTCGTCGCTTTGTGATTGACGTTGCTGTGAGTTCAAACTATGAATACCTTTCGAAGAAGGTAGCTCAAGTATTTCCGTCTCTGGGTGACCCCGACAATTTCACTCTCTCCTGGAAaggtaatatatattttttaattcataaacaTATACATAAAGTTATAAATCAATTCAACTGGTCCATTCATTTTTCCAATTCactgaaatagaaaataaagaaatttaatataaaagataatcATCATTAAATAGTACTTTTATTATAATACACTATATGATCAGACAAATGGGTTGTTCCCCGCCCcaactatttattttgtttgctttttaactttaatttttgttatatatattttattaatgtgATAGTTTGACATTAAAGACACTATAAATGGATCAATGTGTAGGGGACTATTGGTGATTCTCATTCGCTTATAGGACAtaaattgtttattgttttttccaTAATTATAGATTCCGACGGAGACAACATCACTTTCTCCAGCAATGATGAGTTGGTAGAAGCCTTGGGTCAGATAAATGATGACATCTTCCGGATCTATGTCAAAGGTCAGTATGTCTTTGTTATCAAAAGTAGACTATTCAATATCATGAGTATTGTTTCAGTAATgacatgatatattattctcaTCATTGTTGTTTGtatcataatttattattatcgttTCTGTTATTAGTAGTATTTGTAGTAGaattataaaatgatttatattgttatgaaattattttcatttttgtttgctcttaattactatttttattattactatcatcatcattgttatcatcatcatatttcaTGATTATTGTTAACTATGGTTATAATTATTGTaagaatattattattgtatggaGAACATAATTAAATTTGAAGTGGCTCATcagaaatcaaaatcaagactTTCATGAAAGTTACCATGATAATATTAGGCTTTATGGAATTTAACTTTTATGTTTTTCAGTaaatgattctgttattttccttGAAATGAAGTATTATAGTTAATTGCATGATTTGATTACCAATCAATACTGTTATATctatgggggtggggggggtaTGAGAATATCAGAATCCAACATATTTTCATATCCCTCAGTCtgtcatctttatttcatttgacatcaCATGATAAATCCTTTTATATAGTGCATTATACCTTTCAAAAaggtcaaaagaaaaaaagaaaaggtgaaGGAAAACCAAGCTGGAAATGTTATGATGGTATTATCATCATATTATGACATTATTAGAATATTACTctgatttcatttaaaaatcatatAACATTGTTACTATGattatattatttgttattatcatgttcttacattaatattttctatgatATTGTTATTATAGCATTACTATAATGATCTTATAATTATATCTCTacatatatgaaaatatcattatcatattataaatattttatttggtGAAATAGGGAAGAAGAAGTGTTCCCGTGAAGCCCCGTCTACCAGTTCTGATGACGGCGGTCGGGAGGAGCAGGTGTACCACCCAGGCGTAATCTGCGACGGGTGCGAGAGTCGAATCCGCGGTCCGCGGTTCAAGTGCATCACTTGCCCCGACTATGACCTGTGTAAGCAGTGCGAATCCCGAGGCACCCACCCGGAGCACAGTTTCGTCAAGTTCCGCAAGCCTCAAGTCGGCCGCAGCCACCACGGTGTAAGTATCGAAGTGCCCATTTTCTGTCTTGGGTGTATATACTTTTCATccacatttttgtccgacagcTCCCAGATTGGACATTCTTCCTTGATTCTTGTTTGGTTGAGAAATTATGTTACTGTGCTAACTGTcggtccgacaagtcctttcatgaaacacttgaTCCCCTGATTTGCCACACACCATAGAGGTAGTGTTATTTTCTGGAGACACTTGTTCAGTTTCTCTTTGTCCTGAGTACCTGCAATCACACATGGAATATGATTAGACTGTGAAAACCATTGTATACTGAAAATgttgataccattttcagtgTATAATAAGTTGCCATTCCTGGATTTATGCCATTTCCCTAAAGCTAATCACTAATCATTCTAATTCTACATTTGTGATGTCATGTGGTCCCATGTGATAAGAACAACAAATCACTTAAAAATGTAAATTGGCATGTTTTTGTTATAGCCCTGCTATTATCACtgattttgccttgtttattaCCGATATCTATTTTATGTATCCAAAgtataaagaaataataaataatcagtGCTGTAAAGATTGTTGtcaatttaaaatgtcaaagcAGATTAATGTTGACCATATCAGTTGTGTACCGCTGTAATGAAAAGGATATAGTTGATAAAAAAGTGATGTTGATCAGCCTAAGAGAAACTTTTATATCTTTTAGGACTAAGGCAGTAGTCTATTCAgaaaaatttaatttattttttcttttttcttttgcaacACAGGGATTTTTCAACAGACCTGGGATGTTCCGCCAGTTTGGTCACCCTGGCTGGCGTCACTGGTGGCAGTGGAaccaacaacagcagcagcaacagcaggAGCAGCAGGAGGGTGGTACCCAATCTACTACCCAACAGGAGCAGACCCAGGGGGCTGGTGGCTCTCAAAACAATGGAGGCTGTCCCATGGGCCCAGGTCCCTTCtgcccccctcctcccccaccCCCAGGGTGTCACAtgccacccccacccccacctcCACCCCATGCTTTCCTGAGGGACATCGGACAGACCGTTGCCCAGATGCTTGACCCTCTAGGTAAGATGAGATGTCAACAGAGTtgtgatagaaaaaaaacaactctttttcttttcatttaaacaatattttcccCATTCTGAAACATTTTAGATCGTTTTGAAAATAGATGATTTGAATTTAGTCCTCATCTGCTGGATGTTTTAAACCTGGTTTAGTCCTTGACTGCAGGGGTGGCAGGATTTACATTGCATTCACAGAGGCCACTCTCCCACCCTGCATCCGCTTTACTCTCTTCAGTGCATTTTCTTCCCTCAACCCAACCCTTCTACTCTGCCCCACTACTGGCTCCTTCTTTGGTCGCCCCCTTCCCATTTGTcaggaaacatatttttttaaagaaaatatgtttattgTGTCAGCCCTTGATATCAGGACTTGAACTTGTAAATAAATGACCGTTTTTTTCCTATCAATTTAAGTAATGATAAGTTTCCACCAGATTAcggcagagctaccaagtctcacgcattatgcgtgagactcaagcattttggactcttgttcaacCCCTCAAAtttctgtctcacgcaactatcacagcctatccccatagacattgtacacaatgtctgtgatctcactcagattcacagaaaatctcacgcatagctggtctttgaacttggtaTCTCTGGATTATGGTGCATTCTGTTTTGAAGTTATTACACAcactatatatatgtatatgtctCCGGAAAAGCAATCTGTATGAGAAGTTCATTAAAAACATAGCTAGGTGTGCTATAAAACTTGACTTATTCTTTCATGTAGGAATTGATGTTGATATCGACATCGACCACCAGGGTAACCGTACGCACTGTGCTGGAGAAGCCAATGCCTGCGGTGGAGGGCGAGGCCGTGGGAGGCATGGGCGTCGTCACGGGGGCAGAGGTCAGCGGGGATGCCGAAAGACATGGCATGGTGGTGAGCAGACGTCTATGGATATGAGCCAGGAGGATGCGGAACAACCAGGTCAAGAAGCTTCAAACAACCAAGATCAGGGAAGCACACAGAATGAAGCCAGTCAGAAGCAACCACAAGAACCTGTTGAACCAATGGTATGTCCAATTTCTCTTTGGAAGTTGTAGCAGAAACCAAGGCCCCTGTCTAACAAAGAGTTGGAATGCATTCCAATGAACCTCAAATTGTAATACATTCAAATCCTACTCAAAGATTCAAATTGAGATAGATTCAAACCCTACTCATTTTGTTACACATTCAAATCATCCTCAGACTGTAATAGATTTAAATTATATTCAAATTGAGGATTCAAATCCTACTCAAATTGAAATACATTCAAAGCATACTGAAAATGTagattcaaatgaaaataaaattgttttacatTCAAATCATACCCCCAttgtaataaattcaaataaagcTCAAATTGTTTTACATTCATATCATACTGAGATTGAAATAGGTTCAAATTATACTCAAATTGTTATACATTCAAATCATACTCAGATTGTAGTAGATTCAAATGATATTTACATTCTTATACATTCAAATCTTACCCAAATCGTAATAGATCCagataaaatcaaattgttatACATTCAAATCTTACTCAGATTGTAATAGAATCCAAtgatattcaaatcaaactcataTTACAACTTGCAACTCTGTAAGACTTTGATGCAGCTGTACTGTCACTTAGCCAATTACAATACAGAGCTTTcccaatagtttttttttcgaGGGGGGGGTCCAATTTCAGAAATTCAGTACACCAATGCAATGTAATATGATTATCATACAAGGCACTTATTGTGAATGCAACTTATCTGTGCTTCTTCTTAGGAGACTACTGTGAAAGACGGAGCTGGTAGAAGTCCTAACGCCTCACCATCTGGGAGTGATGATGCCGACTGGACCATGCTTGAGAAAACAGGAGGAAAGGCTCCCTCCCAGACTCCacaggaaggtatggaattacATTCGAATTCTATTTGTTCCACTTTCACAAACACAACACATGCATAAGAAATGtattagttaaaaaaaaaaacctttcaagTTTGATTAAATGTTTGACATGAGATACAGTATGTAATACAACCGAGGTGCTTTTTGTTTATTgatgtatttctgttttttacATCTGCTTAATATTCAGGGGtttacttttaataataataatttacttttaataaagtggtgatgatgatgatactaataatgatcataaattataatcattattattattactatttacataattatcatcattactatcaacaaaattattcttctcatttttattatcattatcgttactatttttataataattacaataatgataatgaaaataattttgatgatagtaatgatgatgattaaataAAAGCTGTAATAATAGTGAATATGAAGAATGCACCACAGTGACATTGATTTTGACACTGCCGCATTCTATCTCTTTTCAGGATCTACAGTGCATCAGACTGCTCTGAATCAGATGATGGCGATGGGCTTTGACAATGAGGGCGGTTGGTTGACCAGCCTCCTGGAAGCAAAGAATGGCGACATCGTCCGCGTCCTTGACGCCATCAAGATCGGTCACCAGCCTTCCTTCAGTGGAAACTCCAAGTAAAGCTGTTCCAGAGAGATTGCATCGCGTTGCTATCGTAACCGTAACTTCGTTTAGCTTTGTTACTCTGTATGTTTTTGA	L. variegatus

mRNAs based on gene models(0)

mRNAs from cDNA libraries (2)

Clone	Accession	Species	Library	Anatomy	Stage
	XM_041606730 >XM_041606730\|XM_041606730.1 PREDICTED: Lytechinus variegatus sequestosome-1-like (LOC121413780), mRNA TATTTTAAGAAACGATGTAAACAAACATTGAGCTGTCTTTCGCTCGCTTGGACGAACGAATCGATCGTTCCGTTTTGGAAAACGTAATGTCTACGTTCAATTTCGCTGAGTAAGTCCGGATTCGTGTGTTCCAGAAACGTCTTGCATTTGGGTATATAAAGGCAGCCACTCCCTGTCGATATTCATACTGCGATTCAGTGGTAGAATCTCCGCAAGCAAGAGACAACCGAGTTTCAACGTCTGCGTCCGACGTCAAAACCAGCAATAACTGATAACAAAAAGTTATCTGAAAATCAGAAACTACCAAGAATTATACGCCGCTAGAGATCAGACCACTTGTTTCACTTTTGACCAGCCATCTACAACAGGATTCAACGCAACATGTCGATGACAGTGAAAGCATACCTGAAGCGGGGAGAGAACGCAAATGCAGAGATTCGTCGCTTTGTGATTGACGTTGCTGTGAGTTCAAACTATGAATACCTTTCGAAGAAGGTAGCTCAAGTATTTCCGTCTCTGGGTGACCCCGACAATTTCACTCTCTCCTGGAAAGATTCCGACGGAGACAACATCACTTTCTCCAGCAATGATGAGTTGGTAGAAGCCTTGGGTCAGATAAATGATGACATCTTCCGGATCTATGTCAAAGGGAAGAAGAAGTGTTCCCGTGAAGCCCCGTCTACCAGTTCTGATGACGGCGGTCGGGAGGAGCAGGTGTACCACCCAGGCGTAATCTGCGACGGGTGCGAGAGTCGAATCCGCGGTCCGCGGTTCAAGTGCATCACTTGCCCCGACTATGACCTGTGTAAGCAGTGCGAATCCCGAGGCACCCACCCGGAGCACAGTTTCGTCAAGTTCCGCAAGCCTCAAGTCGGCCGCAGCCACCACGGTGGATTTTTCAACAGACCTGGGATGTTCCGCCAGTTTGGTCACCCTGGCTGGCGTCACTGGTGGCAGTGGAACCAACAACAGCAGCAGCAACAGCAGGAGCAGCAGGAGGGTGGTACCCAATCTACTACCCAACAGGAGCAGACCCAGGGGGCTGGTGGCTCTCAAAACAATGGAGGCTGTCCCATGGGCCCAGGTCCCTTCTGCCCCCCTCCTCCCCCACCCCCAGGGTGTCACATGCCACCCCCACCCCCACCTCCACCCCATGCTTTCCTGAGGGACATCGGACAGACCGTTGCCCAGATGCTTGACCCTCTAGGAATTGATGTTGATATCGACATCGACCACCAGGGTAACCGTACGCACTGTGCTGGAGAAGCCAATGCCTGCGGTGGAGGGCGAGGCCGTGGGAGGCATGGGCGTCGTCACGGGGGCAGAGGTCAGCGGGGATGCCGAAAGACATGGCATGGTGGTGAGCAGACGTCTATGGATATGAGCCAGGAGGATGCGGAACAACCAGGTCAAGAAGCTTCAAACAACCAAGATCAGGGAAGCACACAGAATGAAGCCAGTCAGAAGCAACCACAAGAACCTGTTGAACCAATGGAGACTACTGTGAAAGACGGAGCTGGTAGAAGTCCTAACGCCTCACCATCTGGGAGTGATGATGCCGACTGGACCATGCTTGAGAAAACAGGAGGAAAGGCTCCCTCCCAGACTCCACAGGAAGGATCTACAGTGCATCAGACTGCTCTGAATCAGATGATGGCGATGGGCTTTGACAATGAGGGCGGTTGGTTGACCAGCCTCCTGGAAGCAAAGAATGGCGACATCGTCCGCGTCCTTGACGCCATCAAGATCGGTCACCAGCCTTCCTTCAGTGGAAACTCCAAGTAAAGCTGTTCCAGAGAGATTGCATCGCGTTGCTATCGTAACCGTAACTTCGTTTAGCTTTGTTACTCTGTATGTTTTTGA	L. variegatus
	GAUR01073216 >GAUR01073216\|GAUR01073216.1 TSA: Lytechinus variegatus AMR9006.38972.5.1 transcribed RNA sequence TGCTGTTGCTGCTGTTGTTGGTTCCACTGCCACCAGTGACGCCAGCCAGGGTGACCAAACTGGCGGAACATCCCAGGTCTGTTGAAAAATCCACCGTGGTGGCTGCGGCCGACTTGAGGCTTGCGGAACTTGACGAAGCTGTGCTCCGGGTGGGTGCCTCGGGATTCGCACTGCTTACACAGGTCATAGTCGGGGCAAGTGATGCACTTGAACCGCGGACCACGGATTCGACTCTCGCACCCGTCGCAGATTATGCCTGGGTGGTACACCTGCTCCTCCCGACCGCCGTCATCAGAACTGGTAGACGGGGCTTCACGGGAACACTTCTTCTTCCCTTTGACATAGATCCGGAAGATGTCATCATTTATCTGACCCAAGGCTTCTACCAACTCATCATCGCTGGAGAAAGTGATGTTGTCTCCTTCAGAATCTTTCCAGGAGAGAGTGAAATTGTCGGGGTCACCCAGAGACGGAAATACTTGAGCTACCTTCTTCGAAAGGTATTCATAGTTTGAACTCACAGCAACGTCAATCACAAAGCGACGAATCTCTGCATTTGCGTTCTCTCCCCGCTTCAGGTATGCTTTCACTGTCATCGACATGTTGCGTTGAATCTTGTTGTAGATGGCTGGTCAAAAGTGAAACAAGTGGTCTGATCTCTAGCGGCGTAGAATTCTTGGTAGTTTCTGATTTTCAGGTATTACTTTTTGTTATCGGTTATTGCTGGTTTTGACGTCGGACGCAGACGTTGACACTCGGTTGTCTCTTGCTTGCGGAGATTCTACCACACTGAATCGCAGTATGAACAGGGAGTGGCTGCCTTTATATACCCAAATGCAAGACGTTTCTGGAACACACGAATCCGGACTTACTCAGCGAAATTGAACGTAGACATTACGTTTTCCAAAACGGAACGATCGATTCGTTCGTCCAAGCGAGCGAAAG	L. variegatus

ESTs (0)