Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.
Echinobase

Summary Expression Gene Literature (12) GO Terms (47) Nucleotides (18) Proteins (18) Interactants (60) Wiki
ECB-GENEPAGE-23128358

Show:     All S. purpuratus L. variegatus P. miniata A. planci

Nucleotide sequences for prdm1 - All

RefSeq mRNAs(12)
Models - Gene (4)
Models - mRNA (0)
mRNAs (18)
ESTs (0)

RefSeq mRNAs (12)

Accession Version Protein Name Length Protein Species
NM_001079553 NM_001079553.1 NP_001073021.1 Blimp1/Krox1b isoform 1 4083 bp NP_001073021 S. purpuratus
NM_001079553 NM_001079553.1 NP_001073021.1 Blimp1/Krox1b isoform 1 4083 bp NP_001073021 S. purpuratus
NM_214574 NM_214574.3 NP_999739.3 Blimp1/Krox1b isoform 2 3988 bp NP_999739 S. purpuratus
NM_214574 NM_214574.3 NP_999739.3 Blimp1/Krox1b isoform 2 3988 bp NP_999739 S. purpuratus
XM_038221899 XM_038221899.1 XP_038077827.1 PR domain zinc finger protein 1-like isoform X3 4455 bp XP_038077827 P. miniata
XM_038221897 XM_038221897.1 XP_038077825.1 PR domain zinc finger protein 1-like isoform X1 4526 bp XP_038077825 P. miniata
XM_038221898 XM_038221898.1 XP_038077826.1 PR domain zinc finger protein 1-like isoform X2 4773 bp XP_038077826 P. miniata
XM_022253293 XM_022253293.1 XP_022108985.1 PR domain zinc finger protein 1-like isoform X4 4617 bp XP_022108985 A. planci
XM_022253294 XM_022253294.1 XP_022108986.1 PR domain zinc finger protein 1-like isoform X4 4610 bp XP_022108986 A. planci
XM_022253290 XM_022253290.1 XP_022108982.1 PR domain zinc finger protein 1-like isoform X1 5067 bp XP_022108982 A. planci
XM_022253291 XM_022253291.1 XP_022108983.1 PR domain zinc finger protein 1-like isoform X2 4611 bp XP_022108983 A. planci
XM_022253292 XM_022253292.1 XP_022108984.1 PR domain zinc finger protein 1-like isoform X3 4890 bp XP_022108984 A. planci

Models - Gene (4)

Source Version Model Species
NCBI_REFSEQ/JGI 5.0 blimp1/krox S. purpuratus
NCBI_REFSEQ/JGI 3.0 LOC119745514 P. miniata
NCBI_REFSEQ/JGI 1.0 LOC110989141 A. planci
NCBI_REFSEQ/JGI 3.1 blimp1/krox S. purpuratus

mRNAs based on gene models(0)


mRNAs from cDNA libraries (18)

Clone Accession Species Library Anatomy Stage
AF102558 S. purpuratus
DQ177152 S. purpuratus
DQ225099 S. purpuratus
JT097131 S. purpuratus
JT122661 S. purpuratus
NM_001079553 S. purpuratus
NM_214574 S. purpuratus
XM_038221899 P. miniata
AY196329 P. miniata
AY196905 P. miniata
GHJN010888726 P. miniata
XM_038221897 P. miniata
XM_038221898 P. miniata
XM_022253291 A. planci
XM_022253292 A. planci
XM_022253293 A. planci
XM_022253294 A. planci
XM_022253290 A. planci

ESTs (0)