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Lysine Acetylation is an Important Post-Translational Modification that Modulates Heat Shock Response in the Sea Cucumber Apostichopus japonicus. , Xu D, Wang X., Int J Mol Sci. September 9, 2019; 20 (18):
The HCN channel voltage sensor undergoes a large downward motion during hyperpolarization. , Dai G, Aman TK, DiMaio F, Zagotta WN., Nat Struct Mol Biol. August 1, 2019; 26 (8): 686-694.
Macrophage migration inhibitory factor is involved in inflammation response in pathogen challenged Apostichopus japonicus. , Lv Z , Guo M, Li C, Shao Y , Zhao X, Zhang W ., Fish Shellfish Immunol. April 1, 2019; 87 839-846.
Needle in a haystack-genetic evidence confirms the expansion of the alien echinoid Diadema setosum (Echinoidea: Diadematidae) to the Mediterranean coast of Israel. , Bronstein O, Kroh A., Zootaxa. October 11, 2018; 4497 (4): 593-599.
Sophisticated lessons from simple organisms: appreciating the value of curiosity-driven research. , Duronio RJ, O'Farrell PH, Sluder G, Su TT., Dis Model Mech. December 19, 2017; 10 (12): 1381-1389.
Functional divergence of paralogous transcription factors supported the evolution of biomineralization in echinoderms. , Khor JM, Ettensohn CA ., Elife. November 20, 2017; 6
Hydroxylation of a conserved tRNA modification establishes non-universal genetic code in echinoderm mitochondria. , Nagao A, Ohara M, Miyauchi K, Yokobori SI, Yamagishi A, Watanabe K, Suzuki T., Nat Struct Mol Biol. September 1, 2017; 24 (9): 778-782.
First report of the nutritional profile and antioxidant potential of Holothuria arguinensis, a new resource for aquaculture in Europe. , Roggatz CC, González-Wangüemert M, Pereira H, Rodrigues MJ, da Silva MM, Barreira L, Varela J, Custódio L., Nat Prod Res. September 1, 2016; 30 (18): 2034-40.
Nutrient composition and antioxidant activity of gonads of sea urchin Stomopneustes variolaris. , Archana A, Babu KR., Food Chem. April 15, 2016; 197 (Pt A): 597-602.
Arthrobacter echini sp. nov., isolated from the gut of a purple sea urchin, Heliocidaris crassispina. , Lee JY, Hyun DW, Soo Kim P, Sik Kim H, Shin NR, Yun JH, Jung MJ, Kim MS, Woong Whon T, Bae JW., Int J Syst Evol Microbiol. April 1, 2016; 66 (4): 1887-93.
De Novo Adult Transcriptomes of Two European Brittle Stars: Spotlight on Opsin-Based Photoreception. , Delroisse J, Mallefet J, Flammang P ., PLoS One. January 1, 2016; 11 (4): e0152988.
The Maternal Maverick/GDF15-like TGF-β Ligand Panda Directs Dorsal-Ventral Axis Formation by Restricting Nodal Expression in the Sea Urchin Embryo. , Haillot E, Molina MD, Lapraz F, Lepage T ., PLoS Biol. September 9, 2015; 13 (9): e1002247.
MOZ and MORF acetyltransferases: Molecular interaction, animal development and human disease. , Yang XJ., Biochim Biophys Acta. August 1, 2015; 1853 (8): 1818-26.
High opsin diversity in a non-visual infaunal brittle star. , Delroisse J, Ullrich-Lüter E, Ortega-Martinez O, Dupont S, Arnone MI , Mallefet J, Flammang P ., BMC Genomics. November 28, 2014; 15 1035.
Primary cell cultures from sea urchin ovaries: a new experimental tool. , Mercurio S, Di Benedetto C, Sugni M, Candia Carnevali MD., In Vitro Cell Dev Biol Anim. February 1, 2014; 50 (2): 139-45.
The enigmatic mitochondrial genome of Rhabdopleura compacta (Pterobranchia) reveals insights into selection of an efficient tRNA system and supports monophyly of Ambulacraria. , Perseke M, Hetmank J, Bernt M, Stadler PF, Schlegel M, Bernhard D., BMC Evol Biol. May 20, 2011; 11 134.
Chemical composition and nutritional quality of sea cucumbers. , Wen J, Hu C, Fan S., J Sci Food Agric. November 1, 2010; 90 (14): 2469-74.
Jeotgalicoccus marinus sp. nov., a marine bacterium isolated from a sea urchin. , Chen YG, Zhang YQ, Shi JX, Xiao HD, Tang SK, Liu ZX, Huang K, Cui XL, Li WJ., Int J Syst Evol Microbiol. July 1, 2009; 59 (Pt 7): 1625-9.
Neurobin/TMPRSS11c, a novel type II transmembrane serine protease that cleaves fibroblast growth factor-2 in vitro. , Stallmach R, Gloor SM., Biochem J. May 15, 2008; 412 (1): 81-91.
The PHD domain of the sea urchin RAG2 homolog, SpRAG2L, recognizes dimethylated lysine 4 in histone H3 tails. , Wilson DR, Norton DD, Fugmann SD ., Dev Comp Immunol. January 1, 2008; 32 (10): 1221-30.
Molecular evolution of Phox-related regulatory subunits for NADPH oxidase enzymes. , Kawahara T, Lambeth JD., BMC Evol Biol. September 27, 2007; 7 178.
Compositional characteristics and antioxidant properties of fresh and processed sea cucumber (Cucumaria frondosa). , Zhong Y, Khan MA, Shahidi F., J Agric Food Chem. February 21, 2007; 55 (4): 1188-92.
Isolation, characterization and molecular evolution of a novel pearl shell lectin from a marine bivalve, Pteria penguin. , Naganuma T, Ogawa T, Hirabayashi J, Kasai K, Kamiya H, Muramoto K., Mol Divers. November 1, 2006; 10 (4): 607-18.
Evolution of the transferrin family: conservation of residues associated with iron and anion binding. , Lambert LA, Perri H, Halbrooks PJ, Mason AB., Comp Biochem Physiol B Biochem Mol Biol. October 1, 2005; 142 (2): 129-41.
Pore topology of the hyperpolarization-activated cyclic nucleotide-gated channel from sea urchin sperm. , Roncaglia P, Mistrík P, Torre V., Biophys J. October 1, 2002; 83 (4): 1953-64.
Crystallization and preliminary X-ray analysis of W120K mutant of streptavidin. , Pazy Y, Laitinen OH, Ravoy B, Kulomaa MS, Wilchek M, Bayer EA, Livnah O., Acta Crystallogr D Biol Crystallogr. December 1, 2001; 57 (Pt 12): 1885-6.
Mutation of a critical tryptophan to lysine in avidin or streptavidin may explain why sea urchin fibropellin adopts an avidin-like domain. , Laitinen OH, Airenne KJ, Marttila AT, Kulik T, Porkka E, Bayer EA, Wilchek M, Kulomaa MS., FEBS Lett. November 12, 1999; 461 (1-2): 52-8.
Function and evolution of Otx proteins. , Klein WH , Li X., Biochem Biophys Res Commun. May 10, 1999; 258 (2): 229-33.
Turnover of histone acetyl groups during sea urchin early development is not required for histone, heat shock and actin gene transcription. , Jasinskas A, Kersulyte D, Langmore J, Steponaviciute D, Jasinskiene N, Gineitis A., Biochim Biophys Acta. March 20, 1997; 1351 (1-2): 168-80.
Cyclic-AMP-dependent activation of an inter-phylum hybrid histone-kinase complex reconstituted from sea urchin sperm-regulatory subunits and bovine heart catalytic subunits. , Hoshino K, Nomura K, Suzuki N., Eur J Biochem. February 1, 1997; 243 (3): 612-23.
Characterization of a large conductance, cation-selective channel from sea urchin eggs that is sensitive to sulfhydryl reducing agents. , Lii T, Lee HC, Gleason FK, Levitt DG., J Membr Biol. March 1, 1996; 150 (1): 27-35.
Analysis of polysulfate-binding domains in porcine proacrosin, a putative zona adhesion protein from mammalian spermatozoa. , Jansen S, Quigley M, Reik W, Jones R., Int J Dev Biol. June 1, 1995; 39 (3): 501-10.
Structure, function and biosynthesis of sperm-activating peptides and fucose sulfate glycoconjugate in the extracellular coat of sea urchin eggs. , Suzuki N., Zoolog Sci. February 1, 1995; 12 (1): 13-27.
Low levels of exogenous histone H1 in yeast cause cell death. , Miloshev G, Venkov P, van Holde K, Zlatanova J., Proc Natl Acad Sci U S A. November 22, 1994; 91 (24): 11567-70.
Expression of a putative precursor mRNA for sperm-activating peptide I in accessory cells of the ovary in the sea urchin Hemicentrotus pulcherrimus. , Kinoh H, Shimizu T, Fujimoto H, Suzuki N., Rouxs Arch Dev Biol. August 1, 1994; 203 (7-8): 381-388.
Derivatization of polyvinylidene difluoride membranes for the solid-phase sequence analysis of a phosphorylated sea urchin embryo histone H1 peptide. , Rodrigues JD, Combrink J, Brandt WF., Anal Biochem. February 1, 1994; 216 (2): 365-72.
Post-translational chemical modifications of proteins--III. Current developments in analytical procedures of identification and quantitation of post-translational chemically modified amino acid(s) and its derivatives. , Han KK, Martinage A., Int J Biochem. July 1, 1993; 25 (7): 957-70.
DNA-bridging by a palindromic alpha-helix. , Suzuki M., Proc Natl Acad Sci U S A. September 15, 1992; 89 (18): 8726-30.
Structure-function analysis of casein kinase 2 with synthetic peptides and anti-peptide antibodies. , Charlton LA, Sanghera JS, Clark-Lewis I, Pelech SL ., J Biol Chem. May 5, 1992; 267 (13): 8840-5.
Proteasome (multicatalytic proteinase) of sea urchin sperm and its possible participation in the acrosome reaction. , Matsumura K, Aketa K ., Mol Reprod Dev. June 1, 1991; 29 (2): 189-99.
Identification and nucleotide sequence of a developmentally regulated gene encoding a eukaryotic histone H1-like protein from Chlamydia trachomatis. , Tao S, Kaul R, Wenman WM., J Bacteriol. May 1, 1991; 173 (9): 2818-22.
Nucleotide sequence of nine protein-coding genes and 22 tRNAs in the mitochondrial DNA of the sea star Pisaster ochraceus. , Smith MJ, Banfield DK, Doteval K, Gorski S, Kowbel DJ., J Mol Evol. September 1, 1990; 31 (3): 195-204.
The amino-acid sequence of multiple lectins of the acorn barnacle Megabalanus rosa and its homology with animal lectins. , Muramoto K, Kamiya H., Biochim Biophys Acta. May 31, 1990; 1039 (1): 42-51.
A single mRNA encodes multiple copies of the egg peptide speract. , Ramarao CS, Burks DJ, Garbers DL ., Biochemistry. April 3, 1990; 29 (13): 3383-8.
AlgR3, a protein resembling eukaryotic histone H1, regulates alginate synthesis in Pseudomonas aeruginosa. , Kato J, Misra TK, Chakrabarty AM., Proc Natl Acad Sci U S A. April 1, 1990; 87 (8): 2887-91.
Purification and characterization of an aminopeptidase from sperm of the sea urchin, Strongylocentrotus intermedius. Ca2(+)-dependent substrate specificity as a novel feature of the enzyme. , Yasuhara T, Yokosawa H, Ishii S., J Biochem. February 1, 1990; 107 (2): 273-9.
Core histone-DNA interactions in sea urchin sperm chromatin. The N-terminal tail of H2B interacts with linker DNA. , Hill CS, Thomas JO., Eur J Biochem. January 12, 1990; 187 (1): 145-53.
Homogeneous reconstituted oligonucleosomes, evidence for salt-dependent folding in the absence of histone H1. , Hansen JC, Ausio J, Stanik VH, van Holde KE., Biochemistry. November 14, 1989; 28 (23): 9129-36.
A stable alpha-helical element in the carboxy-terminal domain of free and chromatin-bound histone H1 from sea urchin sperm. , Hill CS, Martin SR, Thomas JO., EMBO J. September 1, 1989; 8 (9): 2591-9.
Histone- lysine methyltransferase activity from sea-urchin embryo nuclei. Changes in substrate specificity upon purification. , Aniello F, Branno M, Geraci G, Tosi L., Biochim Biophys Acta. June 1, 1989; 1008 (1): 31-8.