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pmar1/ phb homeobox genes and the evolution of the double-negative gate for endomesoderm specification in echinoderms. , Yamazaki A, Morino Y, Urata M, Yamaguchi M, Minokawa T , Furukawa R, Kondo M , Wada H., Development. February 26, 2020; 147 (4):
Notch-mediated lateral inhibition is an evolutionarily conserved mechanism patterning the ectoderm in echinoids. , Erkenbrack EM ., Dev Genes Evol. January 1, 2018; 228 (1): 1-11.
Large-scale gene expression study in the ophiuroid Amphiura filiformis provides insights into evolution of gene regulatory networks. , Dylus DV , Czarkwiani A, Stångberg J, Ortega-Martinez O, Dupont S, Oliveri P ., Evodevo. January 1, 2016; 7 2.
Tissue regeneration and biomineralization in sea urchins: role of Notch signaling and presence of stem cell markers. , Reinardy HC, Emerson CE, Manley JM, Bodnar AG ., PLoS One. January 1, 2015; 10 (8): e0133860.
Larval mesenchyme cell specification in the primitive echinoid occurs independently of the double-negative gate. , Yamazaki A, Kidachi Y, Yamaguchi M, Minokawa T ., Development. July 1, 2014; 141 (13): 2669-79.
Precise cis-regulatory control of spatial and temporal expression of the alx-1 gene in the skeletogenic lineage of s. purpuratus. , Damle S, Davidson EH ., Dev Biol. September 15, 2011; 357 (2): 505-17.
Conserved early expression patterns of micromere specification genes in two echinoid species belonging to the orders clypeasteroida and echinoida. , Yamazaki A, Furuzawa Y, Yamaguchi M., Dev Dyn. December 1, 2010; 239 (12): 3391-403.
Targeted mutagenesis in the sea urchin embryo using zinc-finger nucleases. , Ochiai H, Fujita K, Suzuki K, Nishikawa M, Shibata T, Sakamoto N , Yamamoto T ., Genes Cells. August 1, 2010; 15 (8): 875-85.
Activation of the skeletogenic gene regulatory network in the early sea urchin embryo. , Sharma T, Ettensohn CA ., Development. April 1, 2010; 137 (7): 1149-57.
The cis-regulatory system of the tbrain gene: Alternative use of multiple modules to promote skeletogenic expression in the sea urchin embryo. , Wahl ME, Hahn J, Gora K, Davidson EH , Oliveri P ., Dev Biol. November 15, 2009; 335 (2): 428-41.
Monte Carlo analysis of an ODE Model of the Sea Urchin Endomesoderm Network. , Kühn C, Wierling C, Kühn A, Klipp E, Panopoulou G, Lehrach H, Poustka AJ., BMC Syst Biol. August 23, 2009; 3 83.
Structure-function correlation of micro1 for micromere specification in sea urchin embryos. , Yamazaki A, Ki S, Kokubo T, Yamaguchi M., Mech Dev. January 1, 2009; 126 (8-9): 611-23.
Gene regulatory network subcircuit controlling a dynamic spatial pattern of signaling in the sea urchin embryo. , Smith J, Davidson EH ., Proc Natl Acad Sci U S A. December 23, 2008; 105 (51): 20089-94.
A missing link in the sea urchin embryo gene regulatory network: hesC and the double-negative specification of micromeres. , Revilla-i-Domingo R, Oliveri P , Davidson EH ., Proc Natl Acad Sci U S A. July 24, 2007; 104 (30): 12383-8.