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Summary Expression Gene Literature (124) GO Terms (1) Nucleotides (10) Proteins (6) Interactants (186) Wiki

Papers associated with ago1b

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Evolution and Comparative Physiology of Luqin-Type Neuropeptide Signaling., Yañez-Guerra LA, Elphick MR., Front Neurosci. February 18, 2020; 14 130.        

Trans-Species Polymorphism in Mitochondrial Genome of Camarodont Sea Urchins., Balakirev ES., Genes (Basel). August 5, 2019; 10 (8):     

The Echinoderm Fauna of the Azores (NE Atlantic Ocean)., Madeira P, Kroh A, Cordeiro R, DE Frias Martins AM, Ávila SP., Zootaxa. July 19, 2019; 4639 (1): zootaxa.4639.1.1.

Non-mammalian Hosts and Photobiomodulation: Do All Life-forms Respond to Light?, Hamblin MR, Huang YY, Heiskanen V., Photochem Photobiol. January 1, 2019; 95 (1): 126-139.

The painted sea urchin, Lytechinus pictus, as a genetically-enabled developmental model., Nesbit KT, Fleming T, Batzel G, Pouv A, Rosenblatt HD, Pace DA, Hamdoun A, Lyons DC., Methods Cell Biol. January 1, 2019; 150 105-123.

My research career on (mainly) sea urchins., Vacquier VD., Methods Cell Biol. January 1, 2019; 151 21-26.

High resolution imaging of the cortex isolated from sea urchin eggs and embryos., Henson JH, Samasa B, Burg EC., Methods Cell Biol. January 1, 2019; 151 419-432.

Transcriptome analysis of regeneration during Xenopus laevis experimental twinning., Sosa EA, Moriyama Y, Ding Y, Tejeda-Muñoz N, Colozza G, De Robertis EM., Int J Dev Biol. January 1, 2019; 63 (6-7): 301-309.

Macroscopic and Microscopic Activation of α7 Nicotinic Acetylcholine Receptors by the Structurally Unrelated Allosteric Agonist-Positive Allosteric Modulators (ago-PAMs) B-973B and GAT107., Quadri M, Garai S, Thakur GA, Stokes C, Gulsevin A, Horenstein NA, Papke RL., Mol Pharmacol. January 1, 2019; 95 (1): 43-61.

Taxonomic guide and historical review of echinoids (Echinodermata: Echinoidea) from northeastern Brazil., Gondim AI, De Moura RB, Christoffersen ML, Dias TLP., Zootaxa. December 10, 2018; 4529 (1): 1-72.

Genetic structure of Japanese sea cucumbers (Apostichopus japonicus) along the Sanriku coast supports the effect of earthquakes and related tsunamis., Adachi K, Okumura SI, Moriyama S., Genetica. December 1, 2018; 146 (6): 497-503.

The evolution and nomenclature of GnRH-type and corazonin-type neuropeptide signaling systems., Zandawala M, Tian S, Elphick MR., Gen Comp Endocrinol. August 1, 2018; 264 64-77.

Hidden genetic history of the Japanese sand dollar Peronella (Echinoidea: Laganidae) revealed by nuclear intron sequences., Endo M, Hirose M, Honda M, Koga H, Morino Y, Kiyomoto M, Wada H., Gene. June 15, 2018; 659 37-43.

Is There Association between Vitamin D Concentrations and Body Mass Index Variation in Women Submitted to Y-Roux Surgery?, Dos Santos MTA, Suano-Souza FI, Affonso Fonseca FL, Lazaretti-Castro M, Sarni ROS., J Obes. May 3, 2018; 2018 3251675.  

MicroRNP-mediated translational activation of nonadenylated mRNAs in a mammalian cell-free system., Wakiyama M, Ogami K, Iwaoka R, Aoki K, Hoshino SI., Genes Cells. May 1, 2018; 23 (5): 332-344.

Echinochrome A Release by Red Spherule Cells Is an Iron-Withholding Strategy of Sea Urchin Innate Immunity., Coates CJ, McCulloch C, Betts J, Whalley T., J Innate Immun. January 1, 2018; 10 (2): 119-130.

Parallel embryonic transcriptional programs evolve under distinct constraints and may enable morphological conservation amidst adaptation., Malik A, Gildor T, Sher N, Layous M, Ben-Tabou de-Leon S., Dev Biol. October 1, 2017; 430 (1): 202-213.

Phylogeography of the sand dollar genus Encope: implications regarding the Central American Isthmus and rates of molecular evolution., Coppard SE, Lessios HA., Sci Rep. September 14, 2017; 7 (1): 11520.      

KirrelL, a member of the Ig-domain superfamily of adhesion proteins, is essential for fusion of primary mesenchyme cells in the sea urchin embryo., Ettensohn CA, Dey D., Dev Biol. January 15, 2017; 421 (2): 258-270.

Regulatory heterochronies and loose temporal scaling between sea star and sea urchin regulatory circuits., Gildor T, Hinman V, Ben-Tabou-De-Leon S., Int J Dev Biol. January 1, 2017; 61 (3-4-5): 347-356.

Divergence of ectodermal and mesodermal gene regulatory network linkages in early development of sea urchins., Erkenbrack EM., Proc Natl Acad Sci U S A. November 15, 2016; 113 (46): E7202-E7211.

Do genes lie? Mitochondrial capture masks the Red Sea collector urchin''s true identity (Echinodermata: Echinoidea: Tripneustes)., Bronstein O, Kroh A, Haring E., Mol Phylogenet Evol. November 1, 2016; 104 1-13.

Genome evolution in the allotetraploid frog Xenopus laevis., Session AM, Uno Y, Kwon T, Chapman JA, Toyoda A, Takahashi S, Fukui A, Hikosaka A, Suzuki A, Kondo M, van Heeringen SJ, Quigley I, Heinz S, Ogino H, Ochi H, Hellsten U, Lyons JB, Simakov O, Putnam N, Stites J, Kuroki Y, Tanaka T, Michiue T, Watanabe M, Bogdanovic O, Lister R, Georgiou G, Paranjpe SS, van Kruijsbergen I, Shu S, Carlson J, Kinoshita T, Ohta Y, Mawaribuchi S, Jenkins J, Grimwood J, Schmutz J, Mitros T, Mozaffari SV, Suzuki Y, Haramoto Y, Yamamoto TS, Takagi C, Heald R, Miller K, Haudenschild C, Kitzman J, Nakayama T, Izutsu Y, Robert J, Fortriede J, Burns K, Lotay V, Karimi K, Yasuoka Y, Dichmann DS, Flajnik MF, Houston DW, Shendure J, DuPasquier L, Vize PD, Zorn AM, Ito M, Marcotte EM, Wallingford JB, Ito Y, Asashima M, Ueno N, Matsuda Y, Veenstra GJ, Fujiyama A, Harland RM, Taira M, Rokhsar DS., Nature. October 20, 2016; 538 (7625): 336-343.                          

Comparative Developmental Transcriptomics Reveals Rewiring of a Highly Conserved Gene Regulatory Network during a Major Life History Switch in the Sea Urchin Genus Heliocidaris., Israel JW, Martik ML, Byrne M, Raff EC, Raff RA, McClay DR, Wray GA., PLoS Biol. March 1, 2016; 14 (3): e1002391.            

Identification of a neuropeptide precursor protein that gives rise to a "cocktail" of peptides that bind Cu(II) and generate metal-linked dimers., Jones CE, Zandawala M, Semmens DC, Anderson S, Hanson GR, Janies DA, Elphick MR., Biochim Biophys Acta. January 1, 2016; 1860 (1 Pt A): 57-66.

Large-scale gene expression study in the ophiuroid Amphiura filiformis provides insights into evolution of gene regulatory networks., Dylus DV, Czarkwiani A, Stångberg J, Ortega-Martinez O, Dupont S, Oliveri P., Evodevo. January 1, 2016; 7 2.            

Evolution of a pentameral body plan was not linked to translocation of anterior Hox genes: the echinoderm HOX cluster revisited., Byrne M, Martinez P, Morris V., Evol Dev. January 1, 2016; 18 (2): 137-43.

Live Imaging of Centriole Dynamics by Fluorescently Tagged Proteins in Starfish Oocyte Meiosis., Borrego-Pinto J, Somogyi K, Lénárt P., Methods Mol Biol. January 1, 2016; 1457 145-66.

Hemichordate genomes and deuterostome origins., Simakov O, Kawashima T, Marlétaz F, Jenkins J, Koyanagi R, Mitros T, Hisata K, Bredeson J, Shoguchi E, Gyoja F, Yue JX, Chen YC, Freeman RM, Sasaki A, Hikosaka-Katayama T, Sato A, Fujie M, Baughman KW, Levine J, Gonzalez P, Cameron C, Fritzenwanker JH, Pani AM, Goto H, Kanda M, Arakaki N, Yamasaki S, Qu J, Cree A, Ding Y, Dinh HH, Dugan S, Holder M, Jhangiani SN, Kovar CL, Lee SL, Lewis LR, Morton D, Nazareth LV, Okwuonu G, Santibanez J, Chen R, Richards S, Muzny DM, Gillis A, Peshkin L, Wu M, Humphreys T, Su YH, Putnam NH, Schmutz J, Fujiyama A, Yu JK, Tagawa K, Worley KC, Gibbs RA, Kirschner MW, Lowe CJ, Satoh N, Rokhsar DS, Gerhart J., Nature. November 26, 2015; 527 (7579): 459-65.                          

Evolutionary Analysis and Classification of OATs, OCTs, OCTNs, and Other SLC22 Transporters: Structure-Function Implications and Analysis of Sequence Motifs., Zhu C, Nigam KB, Date RC, Bush KT, Springer SA, Saier MH, Wu W, Nigam SK., PLoS One. November 3, 2015; 10 (11): e0140569.      

Reorganization of sea urchin gene regulatory networks at least 268 million years ago as revealed by oldest fossil cidaroid echinoid., Thompson JR, Petsios E, Davidson EH, Erkenbrack EM, Gao F, Bottjer DJ., Sci Rep. October 21, 2015; 5 15541.    

Comparative Study of Regulatory Circuits in Two Sea Urchin Species Reveals Tight Control of Timing and High Conservation of Expression Dynamics., Gildor T, Ben-Tabou de-Leon S., PLoS Genet. July 31, 2015; 11 (7): e1005435.          

Ticks (Acari: Argasidae, Ixodidae) parasitizing bats in the central Balkans., Burazerović J, Ćakić S, Mihaljica D, Sukara R, Ćirović D, Tomanović S., Exp Appl Acarol. June 1, 2015; 66 (2): 281-91.

Principles of long noncoding RNA evolution derived from direct comparison of transcriptomes in 17 species., Hezroni H, Koppstein D, Schwartz MG, Avrutin A, Bartel DP, Ulitsky I., Cell Rep. May 19, 2015; 11 (7): 1110-22.

Evolution of the RAG1-RAG2 locus: both proteins came from the same transposon., Kapitonov VV, Koonin EV., Biol Direct. April 28, 2015; 10 20.    

The test skeletal matrix of the black sea urchin Arbacia lixula., Kanold JM, Immel F, Broussard C, Guichard N, Plasseraud L, Corneillat M, Alcaraz G, Brümmer F, Marin F., Comp Biochem Physiol Part D Genomics Proteomics. March 1, 2015; 13 24-34.

Database and Informatic Challenges in Representing Both Diploid and Tetraploid Xenopus Species in Xenbase., Vize PD, Liu Y, Karimi K., Cytogenet Genome Res. January 1, 2015; 145 (3-4): 278-82.

Evolution of Innate Immunity: Clues from Invertebrates via Fish to Mammals., Buchmann K., Front Immunol. September 23, 2014; 5 459.  

Early events of fertilization in sea urchin eggs are sensitive to actin-binding organic molecules., Chun JT, Limatola N, Vasilev F, Santella L., Biochem Biophys Res Commun. August 1, 2014; 450 (3): 1166-74.

Horizontal transfer of the msp130 gene supported the evolution of metazoan biomineralization., Ettensohn CA., Evol Dev. May 1, 2014; 16 (3): 139-48.

Asexual reproduction in holothurians., Dolmatov IY., ScientificWorldJournal. January 1, 2014; 2014 527234.    

Taxonomic guide and historical review of starfishes in northeastern Brazil (Echinodermata, Asteroidea)., Gondim AI, Christoffersen ML, Pereira Dias TL., Zookeys. January 1, 2014; (449): 1-56.                        

Quantification of exocytosis kinetics by DIC image analysis of cortical lawns., Mooney J, Thakur S, Kahng P, Trapani JG, Poccia D., J Chem Biol. September 27, 2013; 7 (2): 43-55.

Neural development in Eucidaris tribuloides and the evolutionary history of the echinoid larval nervous system., Bishop CD, MacNeil KE, Patel D, Taylor VJ, Burke RD., Dev Biol. May 1, 2013; 377 (1): 236-44.

A simple method for estimating informative node age priors for the fossil calibration of molecular divergence time analyses., Nowak MD, Smith AB, Simpson C, Zwickl DJ., PLoS One. January 1, 2013; 8 (6): e66245.          

Echinoderm responses to variation in salinity., Russell MP., Adv Mar Biol. January 1, 2013; 66 171-212.

Sequencing and analysis of the gastrula transcriptome of the brittle star Ophiocoma wendtii., Vaughn R, Garnhart N, Garey JR, Thomas WK, Livingston BT., Evodevo. September 3, 2012; 3 (1): 19.            

Fertilization in echinoderms., Santella L, Vasilev F, Chun JT., Biochem Biophys Res Commun. August 31, 2012; 425 (3): 588-94.

Spatial variability of disease incidence and mortality in the sea fan Gorgonia ventalina in Puerto Rico (Alcyonacea: Goorgoniidae)., Zuluaga-Montero A, Sabat AM., Rev Biol Trop. June 1, 2012; 60 (2): 517-26.

Predator crown-of-thorns starfish (Acanthaster planci) outbreak, mass mortality of corals, and cascading effects on reef fish and benthic communities., Kayal M, Vercelloni J, Lison de Loma T, Bosserelle P, Chancerelle Y, Geoffroy S, Stievenart C, Michonneau F, Penin L, Planes S, Adjeroud M., PLoS One. January 1, 2012; 7 (10): e47363.          

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