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Coup-TF: A maternal factor essential for differentiation along the embryonic axes in the sea urchin Paracentrotus lividus. , Tsironis I, Paganos P , Gouvi G, Tsimpos P, Stamopoulou A, Arnone MI , Flytzanis CN., Dev Biol. July 1, 2021; 475 131-144.
CRISPR-Cas9 editing of non-coding genomic loci as a means of controlling gene expression in the sea urchin. , Pieplow A, Dastaw M, Sakuma T, Sakamoto N , Yamamoto T , Yajima M , Oulhen N , Wessel GM ., Dev Biol. April 1, 2021; 472 85-97.
The evolution of a new cell type was associated with competition for a signaling ligand. , Ettensohn CA , Adomako-Ankomah A., PLoS Biol. September 18, 2019; 17 (9): e3000460.
Genome-wide identification of binding sites and gene targets of Alx1, a pivotal regulator of echinoderm skeletogenesis. , Khor JM, Guerrero-Santoro J, Ettensohn CA ., Development. August 19, 2019; 146 (16):
Hidden genetic history of the Japanese sand dollar Peronella (Echinoidea: Laganidae) revealed by nuclear intron sequences. , Endo M, Hirose M, Honda M, Koga H , Morino Y, Kiyomoto M , Wada H., Gene. June 15, 2018; 659 37-43.
Global analysis of primary mesenchyme cell cis-regulatory modules by chromatin accessibility profiling. , Shashikant T, Khor JM, Ettensohn CA ., BMC Genomics. March 20, 2018; 19 (1): 206.
Transforming a transcription factor. , Burke RD ., Elife. January 8, 2018; 7
Thyroid Hormones Accelerate Initiation of Skeletogenesis via MAPK ( ERK1/2) in Larval Sea Urchins (Strongylocentrotus purpuratus). , Taylor E, Heyland A ., Front Endocrinol (Lausanne). January 1, 2018; 9 439.
Functional divergence of paralogous transcription factors supported the evolution of biomineralization in echinoderms. , Khor JM, Ettensohn CA ., Elife. November 20, 2017; 6
Large-scale gene expression study in the ophiuroid Amphiura filiformis provides insights into evolution of gene regulatory networks. , Dylus DV , Czarkwiani A, Stångberg J, Ortega-Martinez O, Dupont S, Oliveri P ., Evodevo. January 1, 2016; 7 2.
Experimental Approach Reveals the Role of alx1 in the Evolution of the Echinoderm Larval Skeleton. , Koga H , Fujitani H, Morino Y, Miyamoto N, Tsuchimoto J, Shibata TF, Nozawa M, Shigenobu S, Ogura A, Tachibana K, Kiyomoto M , Amemiya S , Wada H., PLoS One. January 1, 2016; 11 (2): e0149067.
microRNA-31 modulates skeletal patterning in the sea urchin embryo. , Stepicheva NA, Song JL ., Development. November 1, 2015; 142 (21): 3769-80.
Juvenile skeletogenesis in anciently diverged sea urchin clades. , Gao F, Thompson JR, Petsios E, Erkenbrack E , Moats RA, Bottjer DJ, Davidson EH ., Dev Biol. April 1, 2015; 400 (1): 148-58.
Expession patterns of mesenchyme specification genes in two distantly related echinoids, Glyptocidaris crenularis and Echinocardium cordatum. , Yamazaki A, Minokawa T ., Gene Expr Patterns. March 1, 2015; 17 (2): 87-97.
Larval mesenchyme cell specification in the primitive echinoid occurs independently of the double-negative gate. , Yamazaki A, Kidachi Y, Yamaguchi M, Minokawa T ., Development. July 1, 2014; 141 (13): 2669-79.
Sub-circuits of a gene regulatory network control a developmental epithelial-mesenchymal transition. , Saunders LR, McClay DR ., Development. April 1, 2014; 141 (7): 1503-13.
Genome-wide analysis of the skeletogenic gene regulatory network of sea urchins. , Rafiq K, Shashikant T, McManus CJ, Ettensohn CA ., Development. February 1, 2014; 141 (4): 950-61.
Expression of skeletogenic genes during arm regeneration in the brittle star Amphiura filiformis. , Czarkwiani A, Dylus DV , Oliveri P ., Gene Expr Patterns. December 1, 2013; 13 (8): 464-72.
Development of an embryonic skeletogenic mesenchyme lineage in a sea cucumber reveals the trajectory of change for the evolution of novel structures in echinoderms. , McCauley BS, Wright EP, Exner C, Kitazawa C, Hinman VF ., Evodevo. August 9, 2012; 3 (1): 17.
Precise cis-regulatory control of spatial and temporal expression of the alx-1 gene in the skeletogenic lineage of s. purpuratus. , Damle S, Davidson EH ., Dev Biol. September 15, 2011; 357 (2): 505-17.
Conserved early expression patterns of micromere specification genes in two echinoid species belonging to the orders clypeasteroida and echinoida. , Yamazaki A, Furuzawa Y, Yamaguchi M., Dev Dyn. December 1, 2010; 239 (12): 3391-403.
Activation of the skeletogenic gene regulatory network in the early sea urchin embryo. , Sharma T, Ettensohn CA ., Development. April 1, 2010; 137 (7): 1149-57.
Monte Carlo analysis of an ODE Model of the Sea Urchin Endomesoderm Network. , Kühn C, Wierling C, Kühn A, Klipp E, Panopoulou G, Lehrach H, Poustka AJ., BMC Syst Biol. August 23, 2009; 3 83.
Structure-function correlation of micro1 for micromere specification in sea urchin embryos. , Yamazaki A, Ki S, Kokubo T, Yamaguchi M., Mech Dev. January 1, 2009; 126 (8-9): 611-23.
The surprising complexity of the transcriptional regulation of the spdri gene reveals the existence of new linkages inside sea urchin''s PMC and Oral Ectoderm Gene Regulatory Networks. , Mahmud AA, Amore G., Dev Biol. October 15, 2008; 322 (2): 425-34.
Twist is an essential regulator of the skeletogenic gene regulatory network in the sea urchin embryo. , Wu SY, Yang YP, McClay DR ., Dev Biol. July 15, 2008; 319 (2): 406-15.
A new method, using cis-regulatory control, for blocking embryonic gene expression. , Smith J, Davidson EH ., Dev Biol. June 15, 2008; 318 (2): 360-5.
The Snail repressor is required for PMC ingression in the sea urchin embryo. , Wu SY, McClay DR ., Development. March 1, 2007; 134 (6): 1061-70.
P16 is an essential regulator of skeletogenesis in the sea urchin embryo. , Cheers MS, Ettensohn CA ., Dev Biol. July 15, 2005; 283 (2): 384-96.
A Raf/ MEK/ERK signaling pathway is required for development of the sea urchin embryo micromere lineage through phosphorylation of the transcription factor Ets. , Röttinger E, Besnardeau L, Lepage T ., Development. March 1, 2004; 131 (5): 1075-87.
Alx1, a member of the Cart1/Alx3/ Alx4 subfamily of Paired-class homeodomain proteins, is an essential component of the gene network controlling skeletogenic fate specification in the sea urchin embryo. , Ettensohn CA , Illies MR, Oliveri P , De Jong DL., Development. July 1, 2003; 130 (13): 2917-28.