Papers associated with clock

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	Quantifying fertility? Direct-to-consumer ovarian reserve testing and the new (in)fertility pipeline., Kyweluk MA., Soc Sci Med. January 1, 2020; 245 112697.
	Is reproductive strategy a key factor in understanding the evolutionary history of Southern Ocean Asteroidea (Echinodermata)?, Moreau C, Danis B, Jossart Q, Eléaume M, Sands C, Achaz G, Agüera A, Saucède T., Ecol Evol. August 1, 2019; 9 (15): 8465-8478.
	Disruption of the Pituitary Circadian Clock Induced by Hypothyroidism and Hyperthyroidism: Consequences on Daily Pituitary Hormone Expression Profiles., Bargi-Souza P, Peliciari-Garcia RA, Nunes MT., Thyroid. April 1, 2019; 29 (4): 502-512.
	An overview of the emerging interface between cardiac metabolism, redox biology and the circadian clock., Peliciari-Garcia RA, Darley-Usmar V, Young ME., Free Radic Biol Med. May 1, 2018; 119 75-84.
	Repercussions of hypo and hyperthyroidism on the heart circadian clock., Peliciari-Garcia RA, Bargi-Souza P, Young ME, Nunes MT., Chronobiol Int. February 1, 2018; 35 (2): 147-159.
	Sea cucumber genome provides insights into saponin biosynthesis and aestivation regulation., Li Y, Wang R, Xun X, Wang J, Bao L, Thimmappa R, Ding J, Jiang J, Zhang L, Li T, Lv J, Mu C, Hu X, Zhang L, Liu J, Li Y, Yao L, Jiao W, Wang Y, Lian S, Zhao Z, Zhan Y, Huang X, Liao H, Wang J, Sun H, Mi X, Xia Y, Xing Q, Lu W, Osbourn A, Zhou Z, Chang Y, Bao Z, Wang S., Cell Discov. January 1, 2018; 4 29.
	Phylogeography of the sand dollar genus Encope: implications regarding the Central American Isthmus and rates of molecular evolution., Coppard SE, Lessios HA., Sci Rep. September 14, 2017; 7 (1): 11520.
	Rates and relations of mitochondrial genome evolution across the Echinoidea, with special focus on the superfamily Odontophora., Láruson ÁJ., Ecol Evol. May 17, 2017; 7 (13): 4543-4551.
	Erratum to: Phylogenomics of strongylocentrotid sea urchins., Kober KM, Bernardi G., BMC Evol Biol. February 13, 2017; 17 (1): 50.
	Altered myocardial metabolic adaptation to increased fatty acid availability in cardiomyocyte-specific CLOCK mutant mice., Peliciari-Garcia RA, Goel M, Aristorenas JA, Shah K, He L, Yang Q, Shalev A, Bailey SM, Prabhu SD, Chatham JC, Gamble KL, Young ME., Biochim Biophys Acta. October 1, 2016; 1861 (10): 1579-95.
	Taxonomic status of the three color variants in sea cucumber (Apostichopus japonicus): evidence from mitochondrial phylogenomic analyses., Zhang W, Cao Z, Li Y, Zhao H, Huang J, Liang Z, Huang L., Mitochondrial DNA A DNA Mapp Seq Anal. July 1, 2016; 27 (4): 2330-3.
	Biotinylation: a novel posttranslational modification linking cell autonomous circadian clocks with metabolism., He L, Hamm JA, Reddy A, Sams D, Peliciari-Garcia RA, McGinnis GR, Bailey SM, Chow CW, Rowe GC, Chatham JC, Young ME., Am J Physiol Heart Circ Physiol. June 1, 2016; 310 (11): H1520-32.
	Interrelationship between 3,5,3´-triiodothyronine and the circadian clock in the rodent heart., Peliciari-Garcia RA, Prévide RM, Nunes MT, Young ME., Chronobiol Int. January 1, 2016; 33 (10): 1444-1454.
	Hemichordate genomes and deuterostome origins., Simakov O, Kawashima T, Marlétaz F, Jenkins J, Koyanagi R, Mitros T, Hisata K, Bredeson J, Shoguchi E, Gyoja F, Yue JX, Chen YC, Freeman RM, Sasaki A, Hikosaka-Katayama T, Sato A, Fujie M, Baughman KW, Levine J, Gonzalez P, Cameron C, Fritzenwanker JH, Pani AM, Goto H, Kanda M, Arakaki N, Yamasaki S, Qu J, Cree A, Ding Y, Dinh HH, Dugan S, Holder M, Jhangiani SN, Kovar CL, Lee SL, Lewis LR, Morton D, Nazareth LV, Okwuonu G, Santibanez J, Chen R, Richards S, Muzny DM, Gillis A, Peshkin L, Wu M, Humphreys T, Su YH, Putnam NH, Schmutz J, Fujiyama A, Yu JK, Tagawa K, Worley KC, Gibbs RA, Kirschner MW, Lowe CJ, Satoh N, Rokhsar DS, Gerhart J., Nature. November 26, 2015; 527 (7579): 459-65.
	Antitropical distributions and species delimitation in a group of ophiocomid brittle stars (Echinodermata: Ophiuroidea: Ophiocomidae)., Naughton KM, O'Hara TD, Appleton B, Cisternas PA., Mol Phylogenet Evol. September 1, 2014; 78 232-44.
	Effects of dietary sea cucumber saponin on the gene expression rhythm involved in circadian clock and lipid metabolism in mice during nighttime-feeding., Wen M, Cui J, Xu J, Xue Y, Wang J, Xue C, Wang Y., J Physiol Biochem. September 1, 2014; 70 (3): 801-8.
	The Cryptochrome/Photolyase Family in aquatic organisms., Oliveri P, Fortunato AE, Petrone L, Ishikawa-Fujiwara T, Kobayashi Y, Todo T, Antonova O, Arboleda E, Zantke J, Tessmar-Raible K, Falciatore A., Mar Genomics. April 1, 2014; 14 23-37.
	Phylogenomics of strongylocentrotid sea urchins., Kober KM, Bernardi G., BMC Evol Biol. April 23, 2013; 13 88.
	Fixed, free, and fixed: the fickle phylogeny of extant Crinoidea (Echinodermata) and their Permian-Triassic origin., Rouse GW, Jermiin LS, Wilson NG, Eeckhaut I, Lanterbecq D, Oji T, Young CM, Browning T, Cisternas P, Helgen LE, Stuckey M, Messing CG., Mol Phylogenet Evol. January 1, 2013; 66 (1): 161-81.
	Phylogenetic reconstruction in the order Nymphaeales: ITS2 secondary structure analysis and in silico testing of maturase k (matK) as a potential marker for DNA bar coding., Biswal DK, Debnath M, Kumar S, Tandon P., BMC Bioinformatics. January 1, 2012; 13 Suppl 17 S26.
	Resolving phylogenetic signal from noise when divergence is rapid: a new look at the old problem of echinoderm class relationships., Pisani D, Feuda R, Peterson KJ, Smith AB., Mol Phylogenet Evol. January 1, 2012; 62 (1): 27-34.
	Molecular systematics of the genus Holothuria in the Mediterranean and Northeastern Atlantic and a molecular clock for the diversification of the Holothuriidae (Echinodermata: Holothuroidea)., Borrero-Pérez GH, Gómez-Zurita J, González-Wangüemert M, Marcos C, Pérez-Ruzafa A., Mol Phylogenet Evol. November 1, 2010; 57 (2): 899-906.
	Dating phylogenies with hybrid local molecular clocks., Aris-Brosou S., PLoS One. September 12, 2007; 2 (9): e879.
	Phylogeographic patterns in Leccinum sect. Scabra and the status of the arctic-alpine species L. rotundifoliae., den Bakker HC, Zuccarello GC, Kuyper TW, Noordeloos ME., Mycol Res. June 1, 2007; 111 (Pt 6): 663-72.
	Combined mitochondrial and nuclear sequences support the monophyly of forcipulatacean sea stars., Foltz DW, Bolton MT, Kelley SP, Kelley BD, Nguyen AT., Mol Phylogenet Evol. May 1, 2007; 43 (2): 627-34.
	Testing the molecular clock: molecular and paleontological estimates of divergence times in the Echinoidea (Echinodermata)., Smith AB, Pisani D, Mackenzie-Dodds JA, Stockley B, Webster BL, Littlewood DT., Mol Biol Evol. October 1, 2006; 23 (10): 1832-51.
	Evidence for multiple lateral transfers of the circadian clock cluster in filamentous heterocystic cyanobacteria Nostocaceae., Dvornyk V, Nevo E., J Mol Evol. March 1, 2004; 58 (3): 341-7.
	Calibrating a molecular clock from phylogeographic data: moments and likelihood estimators., Hickerson MJ, Gilchrist MA, Takebayashi N., Evolution. October 1, 2003; 57 (10): 2216-25.
	The evolution of Runx genes I. A comparative study of sequences from phylogenetically diverse model organisms., Rennert J, Coffman JA, Mushegian AR, Robertson AJ., BMC Evol Biol. March 24, 2003; 3 4.
	Long-term microclimatic stress causes rapid adaptive radiation of kaiABC clock gene family in a cyanobacterium, Nostoc linckia, from "Evolution Canyons" I and II, Israel., Dvornyk V, Vinogradova O, Nevo E., Proc Natl Acad Sci U S A. February 19, 2002; 99 (4): 2082-7.
	Genetic divergence between three sea urchin species of the genus Strongylocentrotus from the Sea of Japan., Manchenko GP, Yakovlev SN., Biochem Syst Ecol. January 1, 2001; 29 (1): 31-44.
	An endogenous calcium oscillator may control early embryonic division., Swanson CA, Arkin AP, Ross J., Proc Natl Acad Sci U S A. February 18, 1997; 94 (4): 1194-9.
	Comparative variation of morphological and molecular evolution through geologic time: 28S ribosomal RNA versus morphology in echinoids., Smith AB, Lafay B, Christen R., Philos Trans R Soc Lond B Biol Sci. December 29, 1992; 338 (1286): 365-82.
	DNA-DNA hybridization phylogeny of sand dollars and highly reproducible extent of hybridization values., Marshall CR, Swift H., J Mol Evol. January 1, 1992; 34 (1): 31-44.
	MOLECULAR EVOLUTIONARY DIVERGENCE AMONG NORTH AMERICAN CAVE CRICKETS. II. DNA-DNA HYBRIDIZATION., Caccone A, Powell JR., Evolution. November 1, 1987; 41 (6): 1215-1238.
	Nuclear and mitochondrial DNA comparisons reveal extreme rate variation in the molecular clock., Vawter L, Brown WM., Science. October 10, 1986; 234 (4773): 194-6.
	The program of Hl histone synthesis in S. purpuratus embryos and the control of its timing., Harrison MF, Wilt FH., J Exp Zool. November 1, 1982; 223 (3): 245-56.
	Scatter retinal photocoagulation for proliferative sickle cell retinopathy., Rednam KR, Jampol LM, Goldberg MF., Am J Ophthalmol. May 1, 1982; 93 (5): 594-9.
	Timing mechanisms in early embryonic development., Satoh N., Differentiation. January 1, 1982; 22 (3): 156-63.
	An unusual evolutionary behaviour of a sea urchin histone gene cluster., Busslinger M, Rusconi S, Birnstiel ML., EMBO J. January 1, 1982; 1 (1): 27-33.

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