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pmar1/ phb homeobox genes and the evolution of the double-negative gate for endomesoderm specification in echinoderms. , Yamazaki A, Morino Y, Urata M, Yamaguchi M, Minokawa T , Furukawa R, Kondo M , Wada H., Development. February 26, 2020; 147 (4):
The evolution of a new cell type was associated with competition for a signaling ligand. , Ettensohn CA , Adomako-Ankomah A., PLoS Biol. September 18, 2019; 17 (9): e3000460.
Perturbation of Developmental Regulatory Gene Expression by a G-Quadruplex DNA Inducer in the Sea Urchin Embryo. , Turturici G, La Fiora V, Terenzi A, Barone G, Cavalieri V., Biochemistry. July 31, 2018; 57 (30): 4391-4394.
Diversification of spatiotemporal expression and copy number variation of the echinoid hbox12/ pmar1/ micro1 multigene family. , Cavalieri V, Geraci F, Spinelli G ., PLoS One. March 28, 2017; 12 (3): e0174404.
Large-scale gene expression study in the ophiuroid Amphiura filiformis provides insights into evolution of gene regulatory networks. , Dylus DV , Czarkwiani A, Stångberg J, Ortega-Martinez O, Dupont S, Oliveri P ., Evodevo. January 1, 2016; 7 2.
Ectopic hbox12 Expression Evoked by Histone Deacetylase Inhibition Disrupts Axial Specification of the Sea Urchin Embryo. , Cavalieri V, Spinelli G ., PLoS One. November 3, 2015; 10 (11): e0143860.
microRNA-31 modulates skeletal patterning in the sea urchin embryo. , Stepicheva NA, Song JL ., Development. November 1, 2015; 142 (21): 3769-80.
Early asymmetric cues triggering the dorsal/ventral gene regulatory network of the sea urchin embryo. , Cavalieri V, Spinelli G ., Elife. December 2, 2014; 3 e04664.
bicaudal-C is required for the formation of anterior neurogenic ectoderm in the sea urchin embryo. , Yaguchi S , Yaguchi J, Inaba K., Sci Rep. October 31, 2014; 4 6852.
The Compass-like locus, exclusive to the Ambulacrarians, encodes a chromatin insulator binding protein in the sea urchin embryo. , Cavalieri V, Melfi R, Spinelli G ., PLoS Genet. January 1, 2013; 9 (9): e1003847.
Precise cis-regulatory control of spatial and temporal expression of the alx-1 gene in the skeletogenic lineage of s. purpuratus. , Damle S, Davidson EH ., Dev Biol. September 15, 2011; 357 (2): 505-17.
Regulative deployment of the skeletogenic gene regulatory network during sea urchin development. , Sharma T, Ettensohn CA ., Development. June 1, 2011; 138 (12): 2581-90.
The control of foxN2/3 expression in sea urchin embryos and its function in the skeletogenic gene regulatory network. , Rho HK, McClay DR ., Development. March 1, 2011; 138 (5): 937-45.
Conserved early expression patterns of micromere specification genes in two echinoid species belonging to the orders clypeasteroida and echinoida. , Yamazaki A, Furuzawa Y, Yamaguchi M., Dev Dyn. December 1, 2010; 239 (12): 3391-403.
Activation of the skeletogenic gene regulatory network in the early sea urchin embryo. , Sharma T, Ettensohn CA ., Development. April 1, 2010; 137 (7): 1149-57.
Monte Carlo analysis of an ODE Model of the Sea Urchin Endomesoderm Network. , Kühn C, Wierling C, Kühn A, Klipp E, Panopoulou G, Lehrach H, Poustka AJ., BMC Syst Biol. August 23, 2009; 3 83.
Gene regulatory network interactions in sea urchin endomesoderm induction. , Sethi AJ, Angerer RC , Angerer LM ., PLoS Biol. February 3, 2009; 7 (2): e1000029.
Structure-function correlation of micro1 for micromere specification in sea urchin embryos. , Yamazaki A, Ki S, Kokubo T, Yamaguchi M., Mech Dev. January 1, 2009; 126 (8-9): 611-23.
cis-Regulatory sequences driving the expression of the Hbox12 homeobox-containing gene in the presumptive aboral ectoderm territory of the Paracentrotus lividus sea urchin embryo. , Cavalieri V, Di Bernardo M, Anello L, Spinelli G ., Dev Biol. September 15, 2008; 321 (2): 455-69.
A missing link in the sea urchin embryo gene regulatory network: hesC and the double-negative specification of micromeres. , Revilla-i-Domingo R, Oliveri P , Davidson EH ., Proc Natl Acad Sci U S A. July 24, 2007; 104 (30): 12383-8.
The Snail repressor is required for PMC ingression in the sea urchin embryo. , Wu SY, McClay DR ., Development. March 1, 2007; 134 (6): 1061-70.
The micro1 gene is necessary and sufficient for micromere differentiation and mid/ hindgut-inducing activity in the sea urchin embryo. , Yamazaki A, Kawabata R, Shiomi K, Amemiya S , Sawaguchi M, Mitsunaga-Nakatsubo K, Yamaguchi M., Dev Genes Evol. September 1, 2005; 215 (9): 450-59.
SoxB1 downregulation in vegetal lineages of sea urchin embryos is achieved by both transcriptional repression and selective protein turnover. , Angerer LM , Newman LA, Angerer RC ., Development. March 1, 2005; 132 (5): 999-1008.
Structure, regulation, and function of micro1 in the sea urchin Hemicentrotus pulcherrimus. , Nishimura Y, Sato T, Morita Y, Yamazaki A, Akasaka K , Yamaguchi M., Dev Genes Evol. November 1, 2004; 214 (11): 525-36.
R11: a cis-regulatory node of the sea urchin embryo gene network that controls early expression of SpDelta in micromeres. , Revilla-i-Domingo R, Minokawa T , Davidson EH ., Dev Biol. October 15, 2004; 274 (2): 438-51.
SpHnf6, a transcription factor that executes multiple functions in sea urchin embryogenesis. , Otim O, Amore G, Minokawa T , McClay DR , Davidson EH ., Dev Biol. September 15, 2004; 273 (2): 226-43.
Alx1, a member of the Cart1/Alx3/ Alx4 subfamily of Paired-class homeodomain proteins, is an essential component of the gene network controlling skeletogenic fate specification in the sea urchin embryo. , Ettensohn CA , Illies MR, Oliveri P , De Jong DL., Development. July 1, 2003; 130 (13): 2917-28.
Activation of pmar1 controls specification of micromeres in the sea urchin embryo. , Oliveri P , Davidson EH , McClay DR ., Dev Biol. June 1, 2003; 258 (1): 32-43.
A regulatory gene network that directs micromere specification in the sea urchin embryo. , Oliveri P , Carrick DM, Davidson EH ., Dev Biol. June 1, 2002; 246 (1): 209-28.
Transient activation of the micro1 homeobox gene family in the sea urchin ( Hemicentrotus pulcherrimus) micromere. , Kitamura K, Nishimura Y, Kubotera N, Higuchi Y, Yamaguchi M., Dev Genes Evol. February 1, 2002; 212 (1): 1-10.