Papers associated with tbr1

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	Coup-TF: A maternal factor essential for differentiation along the embryonic axes in the sea urchin Paracentrotus lividus., Tsironis I, Paganos P, Gouvi G, Tsimpos P, Stamopoulou A, Arnone MI, Flytzanis CN., Dev Biol. July 1, 2021; 475 131-144.
	The evolution of a new cell type was associated with competition for a signaling ligand., Ettensohn CA, Adomako-Ankomah A., PLoS Biol. September 18, 2019; 17 (9): e3000460.
	Global analysis of primary mesenchyme cell cis-regulatory modules by chromatin accessibility profiling., Shashikant T, Khor JM, Ettensohn CA., BMC Genomics. March 20, 2018; 19 (1): 206.
	Genome-wide use of high- and low-affinity Tbrain transcription factor binding sites during echinoderm development., Cary GA, Cheatle Jarvela AM, Francolini RD, Hinman VF., Proc Natl Acad Sci U S A. June 6, 2017; 114 (23): 5854-5861.
	Large-scale gene expression study in the ophiuroid Amphiura filiformis provides insights into evolution of gene regulatory networks., Dylus DV, Czarkwiani A, Stångberg J, Ortega-Martinez O, Dupont S, Oliveri P., Evodevo. January 1, 2016; 7 2.
	Expession patterns of mesenchyme specification genes in two distantly related echinoids, Glyptocidaris crenularis and Echinocardium cordatum., Yamazaki A, Minokawa T., Gene Expr Patterns. March 1, 2015; 17 (2): 87-97.
	Modular evolution of DNA-binding preference of a Tbrain transcription factor provides a mechanism for modifying gene regulatory networks., Cheatle Jarvela AM, Brubaker L, Vedenko A, Gupta A, Armitage BA, Bulyk ML, Hinman VF., Mol Biol Evol. October 1, 2014; 31 (10): 2672-88.
	Larval mesenchyme cell specification in the primitive echinoid occurs independently of the double-negative gate., Yamazaki A, Kidachi Y, Yamaguchi M, Minokawa T., Development. July 1, 2014; 141 (13): 2669-79.
	Sub-circuits of a gene regulatory network control a developmental epithelial-mesenchymal transition., Saunders LR, McClay DR., Development. April 1, 2014; 141 (7): 1503-13.
	Expression of skeletogenic genes during arm regeneration in the brittle star Amphiura filiformis., Czarkwiani A, Dylus DV, Oliveri P., Gene Expr Patterns. December 1, 2013; 13 (8): 464-72.
	Development of an embryonic skeletogenic mesenchyme lineage in a sea cucumber reveals the trajectory of change for the evolution of novel structures in echinoderms., McCauley BS, Wright EP, Exner C, Kitazawa C, Hinman VF., Evodevo. August 9, 2012; 3 (1): 17.
	Heterochronic activation of VEGF signaling and the evolution of the skeleton in echinoderm pluteus larvae., Morino Y, Koga H, Tachibana K, Shoguchi E, Kiyomoto M, Wada H., Evol Dev. January 1, 2012; 14 (5): 428-36.
	The control of foxN2/3 expression in sea urchin embryos and its function in the skeletogenic gene regulatory network., Rho HK, McClay DR., Development. March 1, 2011; 138 (5): 937-45.
	Uncoupling of complex regulatory patterning during evolution of larval development in echinoderms., Yankura KA, Martik ML, Jennings CK, Hinman VF., BMC Biol. November 30, 2010; 8 143.
	A conserved gene regulatory network subcircuit drives different developmental fates in the vegetal pole of highly divergent echinoderm embryos., McCauley BS, Weideman EP, Hinman VF., Dev Biol. April 15, 2010; 340 (2): 200-8.
	Evolutionary modification of T-brain (tbr) expression patterns in sand dollar., Minemura K, Yamaguchi M, Minokawa T., Gene Expr Patterns. October 1, 2009; 9 (7): 468-74.
	Monte Carlo analysis of an ODE Model of the Sea Urchin Endomesoderm Network., Kühn C, Wierling C, Kühn A, Klipp E, Panopoulou G, Lehrach H, Poustka AJ., BMC Syst Biol. August 23, 2009; 3 83.
	Structure-function correlation of micro1 for micromere specification in sea urchin embryos., Yamazaki A, Ki S, Kokubo T, Yamaguchi M., Mech Dev. January 1, 2009; 126 (8-9): 611-23.
	A new method, using cis-regulatory control, for blocking embryonic gene expression., Smith J, Davidson EH., Dev Biol. June 15, 2008; 318 (2): 360-5.
	ske-T, a T-box gene expressed in the skeletogenic mesenchyme lineage of the sea urchin embryo., Croce J, Lhomond G, Lozano JC, Gache C., Mech Dev. September 1, 2001; 107 (1-2): 159-62.
	A Sea Cucumber Homolog of the Mouse T-Brain-1 is Expressed in the Invaginated Cells of the Early Gastrula in Holothuria leucospilota., Maruyama YK., Zoolog Sci. April 1, 2000; 17 (3): 383-7.
	A starfish homolog of mouse T-brain-1 is expressed in the archenteron of Asterina pectinifera embryos: possible involvement of two T-box genes in starfish gastrulation., Shoguchi E, Satoh N, Maruyama YK., Dev Growth Differ. February 1, 2000; 42 (1): 61-8.

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