Isabelle Peter - Publications

Publications (16)

ECB-PERS-4162

Publications By Isabelle Peter

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Homologous gene regulatory networks control development of apical organs and brains in Bilateria., Feuda R, Peter IS., Sci Adv. November 4, 2022; 8 (44): eabo2416.
Ciliary photoreceptors in sea urchin larvae indicate pan-deuterostome cell type conservation., Valencia JE, Feuda R, Mellott DO, Burke RD, Peter IS., BMC Biol. December 4, 2021; 19 (1): 257.
How Does the Regulatory Genome Work?, Istrail S, Peter IS., J Comput Biol. July 1, 2019; 26 (7): 685-695.
Methods for the experimental and computational analysis of gene regulatory networks in sea urchins., Peter IS., Methods Cell Biol. January 1, 2019; 151 89-113.
Conserved regulatory state expression controlled by divergent developmental gene regulatory networks in echinoids., Erkenbrack EM, Davidson EH, Peter IS., Development. December 18, 2018; 145 (24):
Regulatory states in the developmental control of gene expression., Peter IS., Brief Funct Genomics. September 1, 2017; 16 (5): 281-287.
Assessing regulatory information in developmental gene regulatory networks., Peter IS, Davidson EH., Proc Natl Acad Sci U S A. June 6, 2017; 114 (23): 5862-5869.
Sequential Response to Multiple Developmental Network Circuits Encoded in an Intronic cis-Regulatory Module of Sea Urchin hox11/13b., Cui M, Vielmas E, Davidson EH, Peter IS., Cell Rep. April 11, 2017; 19 (2): 364-374.
Specific functions of the Wnt signaling system in gene regulatory networks throughout the early sea urchin embryo., Cui M, Siriwon N, Li E, Davidson EH, Peter IS., Proc Natl Acad Sci U S A. November 25, 2014; 111 (47): E5029-38.
Encoding regulatory state boundaries in the pregastrular oral ectoderm of the sea urchin embryo., Li E, Cui M, Peter IS, Davidson EH., Proc Natl Acad Sci U S A. March 11, 2014; 111 (10): E906-13.
Predictive computation of genomic logic processing functions in embryonic development., Peter IS, Faure E, Davidson EH., Proc Natl Acad Sci U S A. October 9, 2012; 109 (41): 16434-42.
Transphyletic conservation of developmental regulatory state in animal evolution., Royo JL, Maeso I, Irimia M, Gao F, Peter IS, Lopes CS, D'Aniello S, Casares F, Davidson EH, Garcia-Fernández J, Gómez-Skarmeta JL., Proc Natl Acad Sci U S A. August 23, 2011; 108 (34): 14186-91.
A gene regulatory network controlling the embryonic specification of endoderm., Peter IS, Davidson EH., Nature. May 29, 2011; 474 (7353): 635-9.
The endoderm gene regulatory network in sea urchin embryos up to mid-blastula stage., Peter IS, Davidson EH., Dev Biol. April 15, 2010; 340 (2): 188-99.
Modularity and design principles in the sea urchin embryo gene regulatory network., Peter IS, Davidson EH., FEBS Lett. December 17, 2009; 583 (24): 3948-58.
Genomic control of patterning., Peter IS, Davidson EH., Int J Dev Biol. January 1, 2009; 53 (5-6): 707-16.

Homologous gene regulatory networks control development of apical organs and brains in Bilateria., Feuda R, Peter IS., Sci Adv. November 4, 2022; 8 (44): eabo2416.

Ciliary photoreceptors in sea urchin larvae indicate pan-deuterostome cell type conservation., Valencia JE, Feuda R, Mellott DO, Burke RD, Peter IS., BMC Biol. December 4, 2021; 19 (1): 257.

How Does the Regulatory Genome Work?, Istrail S, Peter IS., J Comput Biol. July 1, 2019; 26 (7): 685-695.

Methods for the experimental and computational analysis of gene regulatory networks in sea urchins., Peter IS., Methods Cell Biol. January 1, 2019; 151 89-113.

Conserved regulatory state expression controlled by divergent developmental gene regulatory networks in echinoids., Erkenbrack EM, Davidson EH, Peter IS., Development. December 18, 2018; 145 (24):

Regulatory states in the developmental control of gene expression., Peter IS., Brief Funct Genomics. September 1, 2017; 16 (5): 281-287.

Assessing regulatory information in developmental gene regulatory networks., Peter IS, Davidson EH., Proc Natl Acad Sci U S A. June 6, 2017; 114 (23): 5862-5869.

Sequential Response to Multiple Developmental Network Circuits Encoded in an Intronic cis-Regulatory Module of Sea Urchin hox11/13b., Cui M, Vielmas E, Davidson EH, Peter IS., Cell Rep. April 11, 2017; 19 (2): 364-374.

Specific functions of the Wnt signaling system in gene regulatory networks throughout the early sea urchin embryo., Cui M, Siriwon N, Li E, Davidson EH, Peter IS., Proc Natl Acad Sci U S A. November 25, 2014; 111 (47): E5029-38.

Encoding regulatory state boundaries in the pregastrular oral ectoderm of the sea urchin embryo., Li E, Cui M, Peter IS, Davidson EH., Proc Natl Acad Sci U S A. March 11, 2014; 111 (10): E906-13.

Predictive computation of genomic logic processing functions in embryonic development., Peter IS, Faure E, Davidson EH., Proc Natl Acad Sci U S A. October 9, 2012; 109 (41): 16434-42.

Transphyletic conservation of developmental regulatory state in animal evolution., Royo JL, Maeso I, Irimia M, Gao F, Peter IS, Lopes CS, D'Aniello S, Casares F, Davidson EH, Garcia-Fernández J, Gómez-Skarmeta JL., Proc Natl Acad Sci U S A. August 23, 2011; 108 (34): 14186-91.

A gene regulatory network controlling the embryonic specification of endoderm., Peter IS, Davidson EH., Nature. May 29, 2011; 474 (7353): 635-9.

The endoderm gene regulatory network in sea urchin embryos up to mid-blastula stage., Peter IS, Davidson EH., Dev Biol. April 15, 2010; 340 (2): 188-99.

Modularity and design principles in the sea urchin embryo gene regulatory network., Peter IS, Davidson EH., FEBS Lett. December 17, 2009; 583 (24): 3948-58.

Genomic control of patterning., Peter IS, Davidson EH., Int J Dev Biol. January 1, 2009; 53 (5-6): 707-16.

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