Results 1 - 50 of 63 results
Integrative multi-omics increase resolution of the sea urchin posterior gut gene regulatory network at single cell level. , Voronov D , Paganos P , Magri MS, Cuomo C, Maeso I, Gómez-Skarmeta JL, Arnone MI ., Development. July 26, 2024;
Conservation of cis-Regulatory Syntax Underlying Deuterostome Gastrulation. , Buono L, Annona G, Magri MS, Negueruela S, Sepe RM, Caccavale F, Maeso I, Arnone MI , D'Aniello S., Cells. June 28, 2024; 13 (13):
Developmental toxicity of pre-production plastic pellets affects a large swathe of invertebrate taxa. , Jimenez-Guri E, Paganos P , La Vecchia C, Annona G, Caccavale F, Molina MD, Ferrández-Roldán A, Donnellan RD, Salatiello F, Johnstone A, Eliso MC, Spagnuolo A, Cañestro C, Albalat R, Martín-Durán JM, Williams EA, D'Aniello E, Arnone MI ., Chemosphere. April 5, 2024; 141887.
PVC pellet leachates affect adult immune system and embryonic development but not reproductive capacity in the sea urchin Paracentrotus lividus. , Jimenez-Guri E, Murano C, Paganos P , Arnone MI ., Mar Pollut Bull. November 1, 2023; 196 115604.
Single-Cell Transcriptomic Analysis Reveals the Molecular Profile of Go-Opsin Photoreceptor Cells in Sea Urchin Larvae. , Cocurullo M, Paganos P , Annunziata R, Voronov D , Arnone MI ., Cells. August 23, 2023; 12 (17):
A model of decentralized vision in the sea urchin Diadema africanum. , Li T, Kirwan J , Arnone MI , Nilsson DE, La Camera G., iScience. April 21, 2023; 26 (4): 106295.
Plastic leachate-induced toxicity during sea urchin embryonic development: Insights into the molecular pathways affected by PVC. , Paganos P , Ullmann CV, Gaglio D, Bonanomi M, Salmistraro N, Arnone MI , Jimenez-Guri E., Sci Total Environ. March 15, 2023; 864 160901.
Molecular and Cellular Characterization of the TH Pathway in the Sea Urchin Strongylocentrotus purpuratus. , Cocurullo M, Paganos P , Wood NJ, Arnone MI , Oliveri P ., Cells. January 10, 2023; 12 (2):
Active DNA demethylation of developmental cis-regulatory regions predates vertebrate origins. , Skvortsova K, Bertrand S, Voronov D , Duckett PE, Ross SE, Magri MS, Maeso I, Weatheritt RJ, Gómez Skarmeta JL, Arnone MI , Escriva H, Bogdanovic O., Sci Adv. December 2, 2022; 8 (48): eabn2258.
An ancestral Wnt-Brachyury feedback loop in axial patterning and recruitment of mesoderm-determining target genes. , Schwaiger M, Andrikou C, Dnyansagar R, Murguia PF, Paganos P , Voronov D , Zimmermann B, Lebedeva T, Schmidt HA, Genikhovich G, Benvenuto G, Arnone MI , Technau U., Nat Ecol Evol. December 1, 2022; 6 (12): 1921-1939.
Integrating single cell transcriptomics and volume electron microscopy confirms the presence of pancreatic acinar-like cells in sea urchins. , Paganos P , Ronchi P, Carl J, Mizzon G, Martinez P , Benvenuto G, Arnone MI ., Front Cell Dev Biol. September 15, 2022; 10 991664.
A New Model Organism to Investigate Extraocular Photoreception: Opsin and Retinal Gene Expression in the Sea Urchin Paracentrotus lividus. , Paganos P , Ullrich-Lüter E, Caccavale F, Zakrzewski A, Voronov D , Fournon-Berodia I, Cocurullo M, Lüter C, Arnone MI ., Cells. August 24, 2022; 11 (17):
FISH for All: A Fast and Efficient Fluorescent In situ Hybridization (FISH) Protocol for Marine Embryos and Larvae. , Paganos P , Caccavale F, La Vecchia C, D'Aniello E, D'Aniello S, Arnone MI ., Front Physiol. January 1, 2022; 13 878062.
Ovothiol ensures the correct developmental programme of the sea urchin Paracentrotus lividus embryo. , Milito A, Cocurullo M, Columbro A, Nonnis S, Tedeschi G, Castellano I, Arnone MI , Palumbo A., Open Biol. January 1, 2022; 12 (1): 210262.
Single-cell RNA sequencing of the Strongylocentrotus purpuratus larva reveals the blueprint of major cell types and nervous system of a non-chordate deuterostome. , Paganos P , Voronov D , Musser JM, Arendt D, Arnone MI ., Elife. November 25, 2021; 10
Coup-TF: A maternal factor essential for differentiation along the embryonic axes in the sea urchin Paracentrotus lividus. , Tsironis I, Paganos P , Gouvi G, Tsimpos P, Stamopoulou A, Arnone MI , Flytzanis CN., Dev Biol. July 1, 2021; 475 131-144.
Post-metamorphic skeletal growth in the sea urchin Paracentrotus lividus and implications for body plan evolution. , Thompson JR, Paganos P , Benvenuto G, Arnone MI , Oliveri P ., Evodevo. March 16, 2021; 12 (1): 3.
Developmental toxicity of plastic leachates on the sea urchin Paracentrotus lividus. , Rendell-Bhatti F, Paganos P , Pouch A, Mitchell C, D'Aniello S, Godley BJ, Pazdro K, Arnone MI , Jimenez-Guri E., Environ Pollut. January 15, 2021; 269 115744.
ATAC-Seq for Assaying Chromatin Accessibility Protocol Using Echinoderm Embryos. , Magri MS, Voronov D , Ranđelović J, Cuomo C, Gómez-Skarmeta JL, Arnone MI ., Methods Mol Biol. January 1, 2021; 2219 253-265.
Methodology for Whole Mount and Fluorescent RNA In Situ Hybridization in Echinoderms: Single, Double, and Beyond. , Perillo M , Paganos P , Spurrell M, Arnone MI , Wessel GM ., Methods Mol Biol. January 1, 2021; 2219 195-216.
Unravelling the evolutionary history of kisspeptin. , Arnone MI , Oliveri P ., Elife. June 15, 2020; 9
Development and evolution of gut structures: from molecules to function. , Annunziata R, Andrikou C, Perillo M , Cuomo C, Arnone MI ., Cell Tissue Res. September 1, 2019; 377 (3): 445-458.
Using ATAC-seq and RNA-seq to increase resolution in GRN connectivity. , Lowe EK, Cuomo C, Voronov D , Arnone MI ., Methods Cell Biol. January 1, 2019; 151 115-126.
The crowns have eyes: multiple opsins found in the eyes of the crown-of-thorns starfish Acanthaster planci. , Lowe EK, Garm AL, Ullrich-Lüter E, Cuomo C, Arnone MI ., BMC Evol Biol. November 12, 2018; 18 (1): 168.
SoxB2 in sea urchin development: implications in neurogenesis, ciliogenesis and skeletal patterning. , Anishchenko E, Arnone MI , D'Aniello S., Evodevo. January 22, 2018; 9 5.
Neuropeptidergic Systems in Pluteus Larvae of the Sea Urchin Strongylocentrotus purpuratus: Neurochemical Complexity in a "Simple" Nervous System. , Wood NJ, Mattiello T, Rowe ML, Ward L, Perillo M , Arnone MI , Elphick MR , Oliveri P ., Front Endocrinol (Lausanne). January 1, 2018; 9 628.
New Neuronal Subtypes With a "Pre-Pancreatic" Signature in the Sea Urchin Stongylocentrotus purpuratus. , Perillo M , Paganos P , Mattiello T, Cocurullo M, Oliveri P , Arnone MI ., Front Endocrinol (Lausanne). January 1, 2018; 9 650.
Evolutionary recruitment of flexible Esrp-dependent splicing programs into diverse embryonic morphogenetic processes. , Burguera D, Marquez Y, Racioppi C, Permanyer J, Torres-Méndez A, Esposito R, Albuixech-Crespo B, Fanlo L, D'Agostino Y, Gohr A, Navas-Perez E, Riesgo A, Cuomo C, Benvenuto G, Christiaen LA , Martí E, D'Aniello S, Spagnuolo A, Ristoratore F, Arnone MI , Garcia-Fernàndez J, Irimia M., Nat Commun. November 27, 2017; 8 (1): 1799.
Omics approaches to study gene regulatory networks for development in echinoderms. , Lowe EK, Cuomo C, Arnone MI ., Brief Funct Genomics. September 1, 2017; 16 (5): 299-308.
An Elk transcription factor is required for Runx-dependent survival signaling in the sea urchin embryo. , Rizzo F, Coffman JA , Arnone MI ., Dev Biol. August 1, 2016; 416 (1): 173-186.
Echinoderm systems for gene regulatory studies in evolution and development. , Arnone MI , Andrikou C, Annunziata R., Curr Opin Genet Dev. August 1, 2016; 39 129-137.
A pancreatic exocrine-like cell regulatory circuit operating in the upper stomach of the sea urchin Strongylocentrotus purpuratus larva. , Perillo M , Wang YJ , Leach SD, Arnone MI ., BMC Evol Biol. May 26, 2016; 16 (1): 117.
Substituting mouse transcription factor Pou4f2 with a sea urchin orthologue restores retinal ganglion cell development. , Mao CA, Agca C, Mocko-Strand JA, Wang J , Ullrich-Lüter E, Pan P, Wang SW, Arnone MI , Frishman LJ, Klein WH ., Proc Biol Sci. March 16, 2016; 283 (1826): 20152978.
Opsin evolution in the Ambulacraria. , D'Aniello S, Delroisse J, Valero-Gracia A, Lowe EK, Byrne M , Cannon JT, Halanych KM , Elphick MR , Mallefet J, Kaul-Strehlow S, Lowe CJ , Flammang P , Ullrich-Lüter E, Wanninger A, Arnone MI ., Mar Genomics. December 1, 2015; 24 Pt 2 177-83.
Logics and properties of a genetic regulatory program that drives embryonic muscle development in an echinoderm. , Andrikou C, Pai CY, Su YH , Arnone MI ., Elife. July 28, 2015; 4
Reconstructing SALMFamide Neuropeptide Precursor Evolution in the Phylum Echinodermata: Ophiuroid and Crinoid Sequence Data Provide New Insights. , Elphick MR , Semmens DC, Blowes LM, Levine J, Lowe CJ , Arnone MI , Clark MS., Front Endocrinol (Lausanne). February 2, 2015; 6 2.
High opsin diversity in a non-visual infaunal brittle star. , Delroisse J, Ullrich-Lüter E, Ortega-Martinez O, Dupont S, Arnone MI , Mallefet J, Flammang P ., BMC Genomics. November 28, 2014; 15 1035.
Characterization of insulin-like peptides (ILPs) in the sea urchin Strongylocentrotus purpuratus: insights on the evolution of the insulin family. , Perillo M , Arnone MI ., Gen Comp Endocrinol. September 1, 2014; 205 68-79.
A dynamic regulatory network explains ParaHox gene control of gut patterning in the sea urchin. , Annunziata R, Arnone MI ., Development. June 1, 2014; 141 (12): 2462-72.
Pattern and process during sea urchin gut morphogenesis: the regulatory landscape. , Annunziata R, Perillo M , Andrikou C, Cole AG, Martinez P , Arnone MI ., Genesis. March 1, 2014; 52 (3): 251-68.
Myogenesis in the sea urchin embryo: the molecular fingerprint of the myoblast precursors. , Andrikou C, Iovene E, Rizzo F, Oliveri P , Arnone MI ., Evodevo. December 2, 2013; 4 (1): 33.
MicroRNAs support the monophyly of enteropneust hemichordates. , Peterson KJ, Su YH , Arnone MI , Swalla B , King BL., J Exp Zool B Mol Dev Evol. September 1, 2013; 320 (6): 368-74.
C- opsin expressing photoreceptors in echinoderms. , Ullrich-Lüter EM, D'Aniello S, Arnone MI ., Integr Comp Biol. July 1, 2013; 53 (1): 27-38.
Intact cluster and chordate-like expression of ParaHox genes in a sea star. , Annunziata R, Martinez P , Arnone MI ., BMC Biol. June 27, 2013; 11 68.
Unique system of photoreceptors in sea urchin tube feet. , Ullrich-Lüter EM, Dupont S, Arboleda E, Hausen H, Arnone MI ., Proc Natl Acad Sci U S A. May 17, 2011; 108 (20): 8367-72.
Fluorescent in situ hybridization reveals multiple expression domains for SpBrn1/2/4 and identifies a unique ectodermal cell type that co-expresses the ParaHox gene SpLox. , Cole AG, Arnone MI ., Gene Expr Patterns. June 1, 2009; 9 (5): 324-8.
Two ParaHox genes, SpLox and SpCdx, interact to partition the posterior endoderm in the formation of a functional gut. , Cole AG, Rizzo F, Martinez P , Fernandez-Serra M, Arnone MI ., Development. February 1, 2009; 136 (4): 541-9.
Genetic organization and embryonic expression of the ParaHox genes in the sea urchin S. purpuratus: insights into the relationship between clustering and colinearity. , Arnone MI , Rizzo F, Annunciata R, Cameron RA , Peterson KJ, Martínez P., Dev Biol. December 1, 2006; 300 (1): 63-73.
Identification and developmental expression of the ets gene family in the sea urchin (Strongylocentrotus purpuratus). , Rizzo F, Fernandez-Serra M, Squarzoni P, Archimandritis A, Arnone MI ., Dev Biol. December 1, 2006; 300 (1): 35-48.
The sea urchin kinome: a first look. , Bradham CA , Foltz KR , Beane WS, Arnone MI , Rizzo F, Coffman JA , Mushegian A, Goel M, Morales J , Geneviere AM, Lapraz F, Robertson AJ, Kelkar H, Loza-Coll M, Townley IK, Raisch M, Roux MM, Lepage T , Gache C, McClay DR , Manning G., Dev Biol. December 1, 2006; 300 (1): 180-93.