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A single cell RNA sequencing resource for early sea urchin development. , Foster S., Development. September 11, 2020; 147 (17):
pmar1/ phb homeobox genes and the evolution of the double-negative gate for endomesoderm specification in echinoderms. , Yamazaki A., Development. February 26, 2020; 147 (4):
Genetic manipulation of the pigment pathway in a sea urchin reveals distinct lineage commitment prior to metamorphosis in the bilateral to radial body plan transition. , Wessel GM ., Sci Rep. February 6, 2020; 10 (1): 1973.
How Does the Regulatory Genome Work? , Istrail S., J Comput Biol. July 1, 2019; 26 (7): 685-695.
Conserved regulatory state expression controlled by divergent developmental gene regulatory networks in echinoids. , Erkenbrack EM ., Development. December 18, 2018; 145 (24):
Cdc42 controls primary mesenchyme cell morphogenesis in the sea urchin embryo. , Sepúlveda-Ramírez SP., Dev Biol. May 15, 2018; 437 (2): 140-151.
New insights from a high-resolution look at gastrulation in the sea urchin, Lytechinus variegatus. , Martik ML., Mech Dev. December 1, 2017; 148 3-10.
Assessing regulatory information in developmental gene regulatory networks. , Peter IS ., Proc Natl Acad Sci U S A. June 6, 2017; 114 (23): 5862-5869.
Characterization and expression analysis of Galnts in developing Strongylocentrotus purpuratus embryos. , Famiglietti AL., PLoS One. April 17, 2017; 12 (4): e0176479.
Identification of morphogenetic capability limitations via a single starfish embryo/ larva reconstruction method. , Kawai N., Dev Growth Differ. April 1, 2017; 59 (3): 129-140.
Role of Mad2 expression during the early development of the sea urchin. , Bronchain O., Int J Dev Biol. January 1, 2017; 61 (6-7): 451-457.
Wnt, Frizzled, and sFRP gene expression patterns during gastrulation in the starfish Patiria (Asterina) pectinifera. , Kawai N., Gene Expr Patterns. May 1, 2016; 21 (1): 19-27.
Cooperative Wnt- Nodal Signals Regulate the Patterning of Anterior Neuroectoderm. , Yaguchi J., PLoS Genet. April 21, 2016; 12 (4): e1006001.
A workflow to process 3D+time microscopy images of developing organisms and reconstruct their cell lineage. , Faure E., Nat Commun. February 25, 2016; 7 8674.
Large-scale gene expression study in the ophiuroid Amphiura filiformis provides insights into evolution of gene regulatory networks. , Dylus DV ., Evodevo. January 1, 2016; 7 2.
Robustness and Accuracy in Sea Urchin Developmental Gene Regulatory Networks. , Ben-Tabou de-Leon S., Front Genet. January 1, 2016; 7 16.
Ca²⁺ influx-linked protein kinase C activity regulates the β- catenin localization, micromere induction signalling and the oral-aboral axis formation in early sea urchin embryos. , Yazaki I., Zygote. June 1, 2015; 23 (3): 426-46.
microRNAs regulate β- catenin of the Wnt signaling pathway in early sea urchin development. , Stepicheva N., Dev Biol. June 1, 2015; 402 (1): 127-41.
Dose-dependent nuclear β- catenin response segregates endomesoderm along the sea star primary axis. , McCauley BS., Development. January 1, 2015; 142 (1): 207-17.
Mechanisms of the epithelial-to-mesenchymal transition in sea urchin embryos. , Katow H., Tissue Barriers. January 1, 2015; 3 (4): e1059004.
Regulatory logic and pattern formation in the early sea urchin embryo. , Sun M., J Theor Biol. December 21, 2014; 363 80-92.
Delayed transition to new cell fates during cellular reprogramming. , Cheng X., Dev Biol. July 15, 2014; 391 (2): 147-57.
Molecular conservation of metazoan gut formation: evidence from expression of endomesoderm genes in Capitella teleta (Annelida). , Boyle MJ., Evodevo. June 17, 2014; 5 39.
Mesomere-derived glutamate decarboxylase-expressing blastocoelar mesenchyme cells of sea urchin larvae. , Katow H., Biol Open. January 15, 2014; 3 (1): 94-102.
Brief notes on the meaning of a genomic control system for animal embryogenesis. , Davidson E ., Perspect Biol Med. January 1, 2014; 57 (1): 78-86.
Nuclearization of β- catenin in ectodermal precursors confers organizer-like ability to induce endomesoderm and pattern a pluteus larva. , Byrum CA ., Evodevo. November 4, 2013; 4 (1): 31.
Towards 3D in silico modeling of the sea urchin embryonic development. , Rizzi B., J Chem Biol. September 13, 2013; 7 (1): 17-28.
A shift in germ layer allocation is correlated with large egg size and facultative planktotrophy in the echinoid Clypeaster rosaceus. , Zigler KS., Biol Bull. August 1, 2013; 224 (3): 192-9.
Gene regulatory network for neurogenesis in a sea star embryo connects broad neural specification and localized patterning. , Yankura KA., Proc Natl Acad Sci U S A. May 21, 2013; 110 (21): 8591-6.
FGF signaling induces mesoderm in the hemichordate Saccoglossus kowalevskii. , Green SA., Development. March 1, 2013; 140 (5): 1024-33.
Integration of canonical and noncanonical Wnt signaling pathways patterns the neuroectoderm along the anterior-posterior axis of sea urchin embryos. , Range RC ., PLoS Biol. January 1, 2013; 11 (1): e1001467.
Differential regulation of disheveled in a novel vegetal cortical domain in sea urchin eggs and embryos: implications for the localized activation of canonical Wnt signaling. , Peng CJ., PLoS One. January 1, 2013; 8 (11): e80693.
Genetics of gene expression responses to temperature stress in a sea urchin gene network. , Runcie DE., Mol Ecol. September 1, 2012; 21 (18): 4547-62.
"Micromere" formation and expression of endomesoderm regulatory genes during embryogenesis of the primitive echinoid Prionocidaris baculosa. , Yamazaki A., Dev Growth Differ. June 1, 2012; 54 (5): 566-78.
Cis-regulatory logic driving glial cells missing: self-sustaining circuitry in later embryogenesis. , Ransick A., Dev Biol. April 15, 2012; 364 (2): 259-67.
Sequential signaling crosstalk regulates endomesoderm segregation in sea urchin embryos. , Sethi AJ., Science. February 3, 2012; 335 (6068): 590-3.
Frizzled1/2/7 signaling directs β- catenin nuclearisation and initiates endoderm specification in macromeres during sea urchin embryogenesis. , Lhomond G., Development. February 1, 2012; 139 (4): 816-25.
Synthetic in vivo validation of gene network circuitry. , Damle SS., Proc Natl Acad Sci U S A. January 31, 2012; 109 (5): 1548-53.
Opposing nodal and BMP signals regulate left-right asymmetry in the sea urchin larva. , Luo YJ., PLoS Biol. January 1, 2012; 10 (10): e1001402.
Reciprocal signaling between the ectoderm and a mesendodermal left-right organizer directs left-right determination in the sea urchin embryo. , Bessodes N., PLoS Genet. January 1, 2012; 8 (12): e1003121.
Wnt6 activates endoderm in the sea urchin gene regulatory network. , Croce J ., Development. August 1, 2011; 138 (15): 3297-306.
A gene regulatory network controlling the embryonic specification of endoderm. , Peter IS ., Nature. May 29, 2011; 474 (7353): 635-9.
The control of foxN2/3 expression in sea urchin embryos and its function in the skeletogenic gene regulatory network. , Rho HK., Development. March 1, 2011; 138 (5): 937-45.
Uncoupling of complex regulatory patterning during evolution of larval development in echinoderms. , Yankura KA., BMC Biol. November 30, 2010; 8 143.
Information processing at the foxa node of the sea urchin endomesoderm specification network. , de-Leon SB ., Proc Natl Acad Sci U S A. June 1, 2010; 107 (22): 10103-8.
The endoderm gene regulatory network in sea urchin embryos up to mid-blastula stage. , Peter IS ., Dev Biol. April 15, 2010; 340 (2): 188-99.
The expression and distribution of Wnt and Wnt receptor mRNAs during early sea urchin development. , Stamateris RE., Gene Expr Patterns. January 1, 2010; 10 (1): 60-4.
Dynamics of Delta/Notch signaling on endomesoderm segregation in the sea urchin embryo. , Croce JC ., Development. January 1, 2010; 137 (1): 83-91.
Nodal and BMP2/4 pattern the mesoderm and endoderm during development of the sea urchin embryo. , Duboc V., Development. January 1, 2010; 137 (2): 223-35.
Characterization and expression of a sea star otx ortholog (Protxβ1/2) in the larva of Patiriella regularis. , Elia L., Gene Expr Patterns. January 1, 2010; 10 (7-8): 323-7.