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A single cell RNA sequencing resource for early sea urchin development. , Foster S., Development. September 11, 2020; 147 (17):
Simulations of sea urchin early development delineate the role of oriented cell division in the morula-to-blastula transition. , Bodenstein L., Mech Dev. June 1, 2020; 162 103606.
pmar1/ phb homeobox genes and the evolution of the double-negative gate for endomesoderm specification in echinoderms. , Yamazaki A., Development. February 26, 2020; 147 (4):
Genetic manipulation of the pigment pathway in a sea urchin reveals distinct lineage commitment prior to metamorphosis in the bilateral to radial body plan transition. , Wessel GM ., Sci Rep. February 6, 2020; 10 (1): 1973.
The evolution of a new cell type was associated with competition for a signaling ligand. , Ettensohn CA ., PLoS Biol. September 18, 2019; 17 (9): e3000460.
Evolutionary modification of AGS protein contributes to formation of micromeres in sea urchins. , Poon J., Nat Commun. August 22, 2019; 10 (1): 3779.
Transglutaminase Activity Determines Nuclear Localization of Serotonin Immunoreactivity in the Early Embryos of Invertebrates and Vertebrates. , Ivashkin E., ACS Chem Neurosci. August 21, 2019; 10 (8): 3888-3899.
Distinct transcriptional regulation of Nanos2 in the germ line and soma by the Wnt and delta/notch pathways. , Oulhen N ., Dev Biol. August 1, 2019; 452 (1): 34-42.
How Does the Regulatory Genome Work? , Istrail S., J Comput Biol. July 1, 2019; 26 (7): 685-695.
Early development of the feeding larva of the sea urchin Heliocidaris tuberculata: role of the small micromeres. , Morris VB., Dev Genes Evol. January 1, 2019; 229 (1): 1-12.
Methods to label, isolate, and image sea urchin small micromeres, the primordial germ cells (PGCs). , Campanale JP., Methods Cell Biol. January 1, 2019; 150 269-292.
Culture of and experiments with sea urchin embryo primary mesenchyme cells. , Moreno B., Methods Cell Biol. January 1, 2019; 150 293-330.
Conserved regulatory state expression controlled by divergent developmental gene regulatory networks in echinoids. , Erkenbrack EM ., Development. December 18, 2018; 145 (24):
Meis transcription factor maintains the neurogenic ectoderm and regulates the anterior-posterior patterning in embryos of a sea urchin, Hemicentrotus pulcherrimus. , Yaguchi J., Dev Biol. December 1, 2018; 444 (1): 1-8.
An optogenetic approach to control protein localization during embryogenesis of the sea urchin. , Uchida A., Dev Biol. September 1, 2018; 441 (1): 19-30.
Reiterative use of FGF signaling in mesoderm development during embryogenesis and metamorphosis in the hemichordate Ptychodera flava. , Fan TP., BMC Evol Biol. August 3, 2018; 18 (1): 120.
Cdc42 controls primary mesenchyme cell morphogenesis in the sea urchin embryo. , Sepúlveda-Ramírez SP., Dev Biol. May 15, 2018; 437 (2): 140-151.
Transforming a transcription factor. , Burke RD ., Elife. January 8, 2018; 7
Cryo-EM structures of the TMEM16A calcium-activated chloride channel. , Dang S., Nature. December 21, 2017; 552 (7685): 426-429.
New insights from a high-resolution look at gastrulation in the sea urchin, Lytechinus variegatus. , Martik ML., Mech Dev. December 1, 2017; 148 3-10.
Lectins identify distinct populations of coelomocytes in Strongylocentrotus purpuratus. , Liao WY., PLoS One. November 10, 2017; 12 (11): e0187987.
Paleogenomics of echinoids reveals an ancient origin for the double-negative specification of micromeres in sea urchins. , Thompson JR., Proc Natl Acad Sci U S A. June 6, 2017; 114 (23): 5870-5877.
Assessing regulatory information in developmental gene regulatory networks. , Peter IS ., Proc Natl Acad Sci U S A. June 6, 2017; 114 (23): 5862-5869.
Characterization and expression analysis of Galnts in developing Strongylocentrotus purpuratus embryos. , Famiglietti AL., PLoS One. April 17, 2017; 12 (4): e0176479.
Identification of morphogenetic capability limitations via a single starfish embryo/ larva reconstruction method. , Kawai N., Dev Growth Differ. April 1, 2017; 59 (3): 129-140.
Diversification of spatiotemporal expression and copy number variation of the echinoid hbox12/ pmar1/ micro1 multigene family. , Cavalieri V., PLoS One. March 28, 2017; 12 (3): e0174404.
TGF-β sensu stricto signaling regulates skeletal morphogenesis in the sea urchin embryo. , Sun Z., Dev Biol. January 15, 2017; 421 (2): 149-160.
Role of Mad2 expression during the early development of the sea urchin. , Bronchain O., Int J Dev Biol. January 1, 2017; 61 (6-7): 451-457.
An empirical model of Onecut binding activity at the sea urchin SM50 C-element gene regulatory region. , Otim O., Int J Dev Biol. January 1, 2017; 61 (8-9): 537-543.
An integrated modelling framework from cells to organism based on a cohort of digital embryos. , Villoutreix P., Sci Rep. December 2, 2016; 6 37438.
Morphological diversity of blastula formation and gastrulation in temnopleurid sea urchins. , Kitazawa C., Biol Open. November 15, 2016; 5 (11): 1555-1566.
Differential Nanos 2 protein stability results in selective germ cell accumulation in the sea urchin. , Oulhen N ., Dev Biol. October 1, 2016; 418 (1): 146-156.
Cilia play a role in breaking left-right symmetry of the sea urchin embryo. , Takemoto A., Genes Cells. June 1, 2016; 21 (6): 568-78.
Wnt, Frizzled, and sFRP gene expression patterns during gastrulation in the starfish Patiria (Asterina) pectinifera. , Kawai N., Gene Expr Patterns. May 1, 2016; 21 (1): 19-27.
Cooperative Wnt- Nodal Signals Regulate the Patterning of Anterior Neuroectoderm. , Yaguchi J., PLoS Genet. April 21, 2016; 12 (4): e1006001.
A workflow to process 3D+time microscopy images of developing organisms and reconstruct their cell lineage. , Faure E., Nat Commun. February 25, 2016; 7 8674.
Large-scale gene expression study in the ophiuroid Amphiura filiformis provides insights into evolution of gene regulatory networks. , Dylus DV ., Evodevo. January 1, 2016; 7 2.
Experimental Approach Reveals the Role of alx1 in the Evolution of the Echinoderm Larval Skeleton. , Koga H ., PLoS One. January 1, 2016; 11 (2): e0149067.
Robustness and Accuracy in Sea Urchin Developmental Gene Regulatory Networks. , Ben-Tabou de-Leon S., Front Genet. January 1, 2016; 7 16.
Deployment of a retinal determination gene network drives directed cell migration in the sea urchin embryo. , Martik ML., Elife. September 24, 2015; 4
Comparative Study of Regulatory Circuits in Two Sea Urchin Species Reveals Tight Control of Timing and High Conservation of Expression Dynamics. , Gildor T., PLoS Genet. July 31, 2015; 11 (7): e1005435.
Logics and properties of a genetic regulatory program that drives embryonic muscle development in an echinoderm. , Andrikou C., Elife. July 28, 2015; 4
Ca²⁺ influx-linked protein kinase C activity regulates the β- catenin localization, micromere induction signalling and the oral-aboral axis formation in early sea urchin embryos. , Yazaki I., Zygote. June 1, 2015; 23 (3): 426-46.
microRNAs regulate β- catenin of the Wnt signaling pathway in early sea urchin development. , Stepicheva N., Dev Biol. June 1, 2015; 402 (1): 127-41.
Dose-dependent nuclear β- catenin response segregates endomesoderm along the sea star primary axis. , McCauley BS., Development. January 1, 2015; 142 (1): 207-17.
Mechanisms of the epithelial-to-mesenchymal transition in sea urchin embryos. , Katow H., Tissue Barriers. January 1, 2015; 3 (4): e1059004.
Regulatory logic and pattern formation in the early sea urchin embryo. , Sun M., J Theor Biol. December 21, 2014; 363 80-92.
Early asymmetric cues triggering the dorsal/ventral gene regulatory network of the sea urchin embryo. , Cavalieri V., Elife. December 2, 2014; 3 e04664.
Specification to biomineralization: following a single cell type as it constructs a skeleton. , Lyons DC ., Integr Comp Biol. October 1, 2014; 54 (4): 723-33.
Delayed transition to new cell fates during cellular reprogramming. , Cheng X., Dev Biol. July 15, 2014; 391 (2): 147-57.