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| macromere | stage 5 to stage 5 | |
| macromere daughter cell tier | stage 6 to stage 6 | |
| macromere descendant cell | stage 7 to stage 11 | |
| madreporite | early juvenile stage to undefined | |
| male germ cell | adult stage to undefined | |
| male reproductive system | adult stage to undefined | |
| mature adult | adult stage to undefined | |
| mature germ cell | adult stage to undefined | |
| mature oocyte | mature oocyte stage to mature oocyte stage | |
| meiotic spindle | adult stage to fully grown oocyte with off-centered germinal vesicle stage | |
| mesenchyme | early mesenchyme blastula stage to undefined | |
| mesenchyme cell | stage 12 to undefined | |
| mesentery | early juvenile stage to adult stage | |
| mesoderm | 16-cell stage to competent pluteus larva stage | |
| mesomere | stage 5 to stage 5 | |
| micromere | stage 5 to stage 6 | |
| microtubule | undefined | |
| microtubule cytoskeleton | 1-cell stage to undefined | |
| microvillus | 1-cell stage to 1-cell stage | |
| middle foregut | stage 15 to stage 18 | |
| middle hindgut | stage 15 to stage 18 | |
| middle midgut | stage 15 to stage 18 | |
| midgut | stage 15 to stage 18 | |
| mitochondrion | undefined | |
| mitotic spindle | 1-cell stage to undefined | |
| mouth | stage 19 to adult stage | |
| multicellular organism | stage 2 to adult stage | |
| multipolar neuron | prism stage to undefined | |
| muscle | stage 19 to undefined | |
| muscle cell | stage 19 to adulthood | |
| muscle precursor cell | late gastrula stage to early pluteus larva stage | |
| muscular system | larval development to adult stage |
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